RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 PDXDC1Q6P996 788 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 TMEM270Q6UE05 265 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 RSPO2Q6UXX9 243 aaPredicted RBP12.71□□□□□ -0.37
COMMD9-208ENST00000533643 CACNA2D4Q7Z3S7 1137 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 TMC7Q7Z402 723 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.71□□□□□ -0.37
COMMD9-208ENST00000533643 ACOT1Q86TX2 421 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 PPFIBP1Q86W92 1011 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 DRC7Q8IY82 874 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 FAM71AQ8IYT1 594 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 CRYBG2Q8N1P7 616 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 THEM5Q8N1Q8 247 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 SLC4A11Q8NBS3 891 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 RBBP8NLQ8NC74 664 aaPredicted RBP12.71□□□□□ -0.37
COMMD9-208ENST00000533643 OR10T2Q8NGX3 314 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 GDPD5Q8WTR4 605 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 SPAG5Q96R06 1193 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 TMEM209Q96SK2 561 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 LPIN3Q9BQK8 851 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 ACBD6Q9BR61 282 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 NT5C1AQ9BXI3 368 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 DPEP3Q9H4B8 488 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 TLR9Q9NR96 1032 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 MRPL17Q9NRX2 175 aaKnown RBP12.71□□□□□ -0.37
COMMD9-208ENST00000533643 MTRRQ9UBK8 725 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 MYO6Q9UM54 1294 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 BACE2Q9Y5Z0 518 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 TRANK1O15050 2925 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 OR6C75A6NL08 312 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 CYP26A1O43174 497 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 ADAM12O43184 909 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 LPXNO60711 386 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 ATP2C2O75185 946 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 CALCAP01258 141 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 PTPN1P18031 435 aaKnown RBP12.7□□□□□ -0.38
COMMD9-208ENST00000533643 PCSK1P29120 753 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 CLCN1P35523 988 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 SOX5P35711 763 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 USP8P40818 1118 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 STAT1P42224 750 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 ZBED6P86452 979 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 CCDC142Q17RM4 750 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 ZNF394Q53GI3 561 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 PLPP4Q5VZY2 271 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 LRRTM3Q86VH5 581 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 MRPL43Q8N983 215 aaKnown RBP12.7□□□□□ -0.38
COMMD9-208ENST00000533643 TMEM176AQ96HP8 235 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 LRCH3Q96II8 777 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 PKMYT1Q99640 499 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 TCF25Q9BQ70 676 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 SYT15Q9BQS2 421 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 CLSTN3Q9BQT9 956 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 OXCT2Q9BYC2 517 aaPredicted RBP12.7□□□□□ -0.38
COMMD9-208ENST00000533643 ZCWPW1Q9H0M4 648 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 LMAN2LQ9H0V9 348 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 TTYH1Q9H313 450 aaPredicted RBP12.7□□□□□ -0.38
COMMD9-208ENST00000533643 RXFP1Q9HBX9 757 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 NGRNQ9NPE2 291 aaKnown RBP12.7□□□□□ -0.38
COMMD9-208ENST00000533643 CRTAC1Q9NQ79 661 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 ENTPD7Q9NQZ7 604 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 CDH9Q9ULB4 789 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 SSX2IPQ9Y2D8 614 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 LUC7L2Q9Y383 392 aaKnown RBP12.7□□□□□ -0.38
COMMD9-208ENST00000533643 PCDHGC5Q9Y5F6 944 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 VWA8A3KMH1 1905 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 PLXNA4Q9HCM2 1894 aa12.7□□□□□ -0.38
COMMD9-208ENST00000533643 TSC2P49815 1807 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 TMEM265A0A087WTH1 108 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 MYBPHLA2RUH7 354 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 LRRC53A6NM62 1247 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 HIDE1A8MVS5 230 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 GFPT2O94808 682 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 CSPG5O95196 566 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 PAEPP09466 180 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 OR4Q2P0C623 313 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 KRT9P35527 623 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 IRS1P35568 1242 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 PSMC1P62191 440 aaKnown RBP12.69□□□□□ -0.38
COMMD9-208ENST00000533643 GOLGA8FQ08AF8 430 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 GOLGA8DPQ0D2H9 430 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 SMC1AQ14683 1233 aaKnown RBP12.69□□□□□ -0.38
COMMD9-208ENST00000533643 INTS6LQ5JSJ4 861 aaKnown RBP12.69□□□□□ -0.38
COMMD9-208ENST00000533643 E4F1Q66K89 784 aaPredicted RBP12.69□□□□□ -0.38
COMMD9-208ENST00000533643 FAM171BQ6P995 826 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 IRF2BP2Q7Z5L9 587 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 GPIHBP1Q8IV16 184 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 C12orf29Q8N999 325 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 SPC24Q8NBT2 197 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 B3GALNT2Q8NCR0 500 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 ZNF397Q8NF99 534 aaPredicted RBP12.69□□□□□ -0.38
COMMD9-208ENST00000533643 MICAL1Q8TDZ2 1067 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 TNIP3Q96KP6 325 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 HEXIM2Q96MH2 286 aaKnown RBP12.69□□□□□ -0.38
COMMD9-208ENST00000533643 ACP6Q9NPH0 428 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.69□□□□□ -0.38
COMMD9-208ENST00000533643 AIPL1Q9NZN9 384 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 FNIP2Q9P278 1114 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 IRAK3Q9Y616 596 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 CDY1Q9Y6F8 540 aa12.69□□□□□ -0.38
COMMD9-208ENST00000533643 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms