RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 SLC30A4O14863 429 aa17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 CYP3A5P20815 502 aa17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 KCNA4P22459 653 aa17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 GABRR2P28476 465 aa17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 CTHP32929 405 aa17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 TXLNAP40222 546 aa17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 NASPP49321 788 aaPredicted RBP17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 CDR1P51861 262 aa17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 MYBPC2Q14324 1141 aa17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 KYAT1Q16773 422 aa17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 CENPPQ6IPU0 288 aa17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 ARMCX5Q6P1M9 558 aa17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 TXNDC11Q6PKC3 985 aa17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 GAREM2Q75VX8 874 aa17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 HAUS6Q7Z4H7 955 aa17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 NETO1Q8TDF5 533 aa17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 SEPT5Q99719 369 aaPredicted RBP17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 LARSQ9P2J5 1176 aaKnown RBP17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 ASB3Q9Y575 518 aa17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 SRPRBQ9Y5M8 271 aaKnown RBP17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 MYO16Q9Y6X6 1858 aa17.03■□□□□ 0.32
CHMP4A-207ENST00000533523 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 OGTO15294 1046 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 LRP3O75074 770 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 PRAMEF12O95522 483 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 FGF19O95750 216 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 TYMPP19971 482 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 CYP4F8P98187 520 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 COL9A2Q14055 689 aaPredicted RBP17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 PON2Q15165 354 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 ZBTB6Q15916 424 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 WDR44Q5JSH3 913 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 JADE1Q6IE81 842 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 CEP68Q76N32 757 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 ITIH5Q86UX2 942 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 GPBP1Q86WP2 473 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 LEO1Q8WVC0 666 aaPredicted RBP17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 PSMG2Q969U7 264 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 SENP8Q96LD8 212 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 SPATA32Q96LK8 384 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 GCNAQ96QF7 691 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 LPIN3Q9BQK8 851 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 MSTO1Q9BUK6 570 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 CCSER1Q9C0I3 900 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 SCAND2PQ9GZW5 306 aaPredicted RBP17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 GTSE1Q9NYZ3 720 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 CCDC39Q9UFE4 941 aa17.02■□□□□ 0.32
CHMP4A-207ENST00000533523 KIAA1549LQ6ZVL6 1849 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 MYBPHLA2RUH7 354 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 K7ESF4 209 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 HRO43593 1189 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 FAM13AO94988 1023 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 YEATS4O95619 227 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 NFICP08651 508 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 MLLT6P55198 1093 aaPredicted RBP17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 GRIN1Q05586 938 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 DHX8Q14562 1220 aaKnown RBP17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 VEPH1Q14D04 833 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 SLC39A14Q15043 492 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 STK38Q15208 465 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 SLC39A12Q504Y0 691 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 ARHGAP29Q52LW3 1261 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 DGKKQ5KSL6 1271 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 PRR23CQ6ZRP0 262 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 DNAJB7Q7Z6W7 309 aaPredicted RBP17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 LONP2Q86WA8 852 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 RALGPS2Q86X27 583 aaPredicted RBP17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 OR10T2Q8NGX3 314 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 REEP2Q9BRK0 252 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 MKNK1Q9BUB5 465 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 SEMA4GQ9NTN9 838 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 C2orf42Q9NWW7 574 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 FBXO2Q9UK22 296 aaPredicted RBP17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 RCOR1Q9UKL0 485 aa17.01■□□□□ 0.31
CHMP4A-207ENST00000533523 CELSR3Q9NYQ7 3312 aa17■□□□□ 0.31
CHMP4A-207ENST00000533523 GOLGA6L22H0YM25 854 aa17■□□□□ 0.31
CHMP4A-207ENST00000533523 FAM189A1O60320 539 aa17■□□□□ 0.31
CHMP4A-207ENST00000533523 PAPSS2O95340 614 aaPredicted RBP17■□□□□ 0.31
CHMP4A-207ENST00000533523 PLCG1P19174 1290 aa17■□□□□ 0.31
CHMP4A-207ENST00000533523 LILRA4P59901 499 aa17■□□□□ 0.31
CHMP4A-207ENST00000533523 TNK2Q07912 1038 aa17■□□□□ 0.31
CHMP4A-207ENST00000533523 TMEM132DQ14C87 1099 aa17■□□□□ 0.31
CHMP4A-207ENST00000533523 KARSQ15046 597 aaKnown RBP17■□□□□ 0.31
CHMP4A-207ENST00000533523 MGAT5BQ3V5L5 792 aa17■□□□□ 0.31
CHMP4A-207ENST00000533523 ARSHQ5FYA8 562 aa17■□□□□ 0.31
CHMP4A-207ENST00000533523 SPATA1Q5VX52 437 aa17■□□□□ 0.31
CHMP4A-207ENST00000533523 MYCT1Q8N699 235 aa17■□□□□ 0.31
CHMP4A-207ENST00000533523 KRI1Q8N9T8 703 aaKnown RBP17■□□□□ 0.31
CHMP4A-207ENST00000533523 LINC00301Q8NCQ3 95 aa17■□□□□ 0.31
CHMP4A-207ENST00000533523 RAD54LQ92698 747 aa17■□□□□ 0.31
CHMP4A-207ENST00000533523 LRRC3BQ96PB8 259 aa17■□□□□ 0.31
CHMP4A-207ENST00000533523 ODF2LQ9ULJ1 636 aa17■□□□□ 0.31
CHMP4A-207ENST00000533523 TBX20Q9UMR3 447 aa17■□□□□ 0.31
CHMP4A-207ENST00000533523 HELZP42694 1942 aaKnown RBP17■□□□□ 0.31
CHMP4A-207ENST00000533523 PIGRP01833 764 aa16.99■□□□□ 0.31
CHMP4A-207ENST00000533523 KRT18P05783 430 aaKnown RBP16.99■□□□□ 0.31
CHMP4A-207ENST00000533523 PMLP29590 882 aa16.99■□□□□ 0.31
CHMP4A-207ENST00000533523 CDC25CP30307 473 aa16.99■□□□□ 0.31
CHMP4A-207ENST00000533523 CNR2P34972 360 aa16.99■□□□□ 0.31
CHMP4A-207ENST00000533523 PLCB2Q00722 1185 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms