RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 GBP5Q96PP8 586 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 CYP3A7-CYP3A51PA0A087WV96 503 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 ASAP2O43150 1006 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 GMNNO75496 209 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 ADRB2P07550 413 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 HMBSP08397 361 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 SNHG28P0DPA3 235 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 RARGP13631 454 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 CYP3A7P24462 503 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 HNRNPH3P31942 346 aaKnown RBP13.03□□□□□ -0.32
RAD50-209ENST00000533482 ADCYAP1R1P41586 468 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 FKBP1AP62942 108 aaKnown RBP13.03□□□□□ -0.32
RAD50-209ENST00000533482 TTMPQ5BVD1 217 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 SH2D4BQ5SQS7 431 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 TMC3Q7Z5M5 1100 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 USP33Q8TEY7 942 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 HASPINQ8TF76 798 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.03□□□□□ -0.32
RAD50-209ENST00000533482 ZC3H7BQ9UGR2 993 aaKnown RBP13.03□□□□□ -0.32
RAD50-209ENST00000533482 MRPL42Q9Y6G3 142 aaKnown RBP13.03□□□□□ -0.32
RAD50-209ENST00000533482 KCPQ6ZWJ8 1503 aa13.03□□□□□ -0.32
RAD50-209ENST00000533482 APOL1O14791 398 aa13.02□□□□□ -0.32
RAD50-209ENST00000533482 HSPA4LO95757 839 aa13.02□□□□□ -0.32
RAD50-209ENST00000533482 CYP3A4P08684 503 aa13.02□□□□□ -0.32
RAD50-209ENST00000533482 GARTP22102 1010 aa13.02□□□□□ -0.32
RAD50-209ENST00000533482 UBA1P22314 1058 aaKnown RBP13.02□□□□□ -0.32
RAD50-209ENST00000533482 ELF1P32519 619 aa13.02□□□□□ -0.32
RAD50-209ENST00000533482 OVGP1Q12889 678 aa13.02□□□□□ -0.32
RAD50-209ENST00000533482 GSDMBQ8TAX9 411 aa13.02□□□□□ -0.32
RAD50-209ENST00000533482 CYP4F11Q9HBI6 524 aa13.02□□□□□ -0.32
RAD50-209ENST00000533482 CHD2O14647 1828 aaKnown RBP13.02□□□□□ -0.32
RAD50-209ENST00000533482 CCT8L1PA6NM43 557 aa13.02□□□□□ -0.32
RAD50-209ENST00000533482 DIAPH2O60879 1101 aa13.02□□□□□ -0.32
RAD50-209ENST00000533482 MUTP22033 750 aa13.02□□□□□ -0.32
RAD50-209ENST00000533482 SNRPFP62306 86 aaKnown RBP13.02□□□□□ -0.32
RAD50-209ENST00000533482 TAP1Q03518 808 aa13.02□□□□□ -0.32
RAD50-209ENST00000533482 EFHC2Q5JST6 749 aa13.02□□□□□ -0.32
RAD50-209ENST00000533482 RASIP1Q5U651 963 aa13.02□□□□□ -0.32
RAD50-209ENST00000533482 HGSNATQ68CP4 663 aa13.02□□□□□ -0.32
RAD50-209ENST00000533482 EPS8L1Q8TE68 723 aa13.02□□□□□ -0.32
RAD50-209ENST00000533482 C10orf88Q9H8K7 445 aa13.02□□□□□ -0.32
RAD50-209ENST00000533482 UBN1Q9NPG3 1134 aa13.02□□□□□ -0.32
RAD50-209ENST00000533482 CHST7Q9NS84 486 aa13.02□□□□□ -0.32
RAD50-209ENST00000533482 GRIN3BO60391 1043 aa13.02□□□□□ -0.33
RAD50-209ENST00000533482 NOL4O94818 638 aa13.02□□□□□ -0.33
RAD50-209ENST00000533482 ADORA2AP29274 412 aa13.02□□□□□ -0.33
RAD50-209ENST00000533482 TYK2P29597 1187 aa13.02□□□□□ -0.33
RAD50-209ENST00000533482 GOLGA7BQ2TAP0 167 aa13.02□□□□□ -0.33
RAD50-209ENST00000533482 SYDE1Q6ZW31 735 aaPredicted RBP13.02□□□□□ -0.33
RAD50-209ENST00000533482 NLGN2Q8NFZ4 835 aa13.02□□□□□ -0.33
RAD50-209ENST00000533482 TMC2Q8TDI7 906 aa13.02□□□□□ -0.33
RAD50-209ENST00000533482 ZNF606Q8WXB4 792 aa13.02□□□□□ -0.33
RAD50-209ENST00000533482 PPP1R36Q96LQ0 422 aa13.02□□□□□ -0.33
RAD50-209ENST00000533482 B3GAT3O94766 335 aa13.02□□□□□ -0.33
RAD50-209ENST00000533482 PDHA1P08559 390 aa13.02□□□□□ -0.33
RAD50-209ENST00000533482 AKAP5P24588 427 aa13.02□□□□□ -0.33
RAD50-209ENST00000533482 PRKCIP41743 596 aa13.02□□□□□ -0.33
RAD50-209ENST00000533482 MPZL3Q6UWV2 235 aa13.02□□□□□ -0.33
RAD50-209ENST00000533482 MCOLN2Q8IZK6 566 aa13.02□□□□□ -0.33
RAD50-209ENST00000533482 CCNYL1Q8N7R7 359 aa13.02□□□□□ -0.33
RAD50-209ENST00000533482 CCDC124Q96CT7 223 aaKnown RBP13.02□□□□□ -0.33
RAD50-209ENST00000533482 DPP3Q9NY33 737 aa13.02□□□□□ -0.33
RAD50-209ENST00000533482 MAP3K20Q9NYL2 800 aaKnown RBP13.02□□□□□ -0.33
RAD50-209ENST00000533482 TIMM13Q9Y5L4 95 aaPredicted RBP13.02□□□□□ -0.33
RAD50-209ENST00000533482 PROSCO94903 275 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 CTCFP49711 727 aaPredicted RBP13.01□□□□□ -0.33
RAD50-209ENST00000533482 KDSRQ06136 332 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 PRAMEF19Q5SWL8 479 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 LVRNQ6Q4G3 990 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 BZW1Q7L1Q6 419 aaKnown RBP13.01□□□□□ -0.33
RAD50-209ENST00000533482 ZNF677Q86XU0 584 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 INPP4AQ96PE3 977 aaPredicted RBP13.01□□□□□ -0.33
RAD50-209ENST00000533482 TTC1Q99614 292 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 KIF9Q9HAQ2 790 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 GDF3Q9NR23 364 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 NKRFO15226 690 aaKnown RBP eCLIP13.01□□□□□ -0.33
RAD50-209ENST00000533482 CLEC16AQ2KHT3 1053 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 LLGL2Q6P1M3 1020 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.01□□□□□ -0.33
RAD50-209ENST00000533482 PGBD4Q96DM1 585 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 MROH8Q9H579 483 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 GOLGA4Q13439 2230 aaKnown RBP13.01□□□□□ -0.33
RAD50-209ENST00000533482 KRT4P19013 534 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 GCLCP48506 637 aaPredicted RBP13.01□□□□□ -0.33
RAD50-209ENST00000533482 SULT1E1P49888 294 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 OTUD4Q01804 1114 aaKnown RBP13.01□□□□□ -0.33
RAD50-209ENST00000533482 PLEKHH3Q7Z736 793 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 PRUNE1Q86TP1 453 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 DTX3LQ8TDB6 740 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 FAM161BQ96MY7 647 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 ABCF3Q9NUQ8 709 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 WDR35Q9P2L0 1181 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 COL1A1P02452 1464 aaPredicted RBP13.01□□□□□ -0.33
RAD50-209ENST00000533482 LMO7Q8WWI1 1683 aa13.01□□□□□ -0.33
RAD50-209ENST00000533482 DFFAO00273 331 aa13□□□□□ -0.33
RAD50-209ENST00000533482 SH3BP5O60239 455 aa13□□□□□ -0.33
RAD50-209ENST00000533482 HNRNPH1P31943 449 aaKnown RBP13□□□□□ -0.33
RAD50-209ENST00000533482 GNL1P36915 607 aaPredicted RBP13□□□□□ -0.33
RAD50-209ENST00000533482 GRIK1P39086 918 aa13□□□□□ -0.33
RAD50-209ENST00000533482 AARSP49588 968 aaKnown RBP eCLIP13□□□□□ -0.339e-8■■■■□ 21.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms