RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 EFTUD2Q15029 972 aaKnown RBP eCLIP18.36■□□□□ 0.532e-6■■■■□ 25.9
PHRF1-205ENST00000533464 ANGPTL8Q6UXH0 198 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 GANCQ8TET4 914 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.36■□□□□ 0.53
PHRF1-205ENST00000533464 AP3B1O00203 1094 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 FAM107AO95990 144 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 FBXO25Q8TCJ0 367 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 AKT1S1Q96B36 256 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 ANLNQ9NQW6 1124 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 A0A0A6YYK5 440 aaPredicted RBP18.36■□□□□ 0.53
PHRF1-205ENST00000533464 WNT10BO00744 389 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 NCLNQ969V3 563 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 MTMR9Q96QG7 549 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 RANBP17Q9H2T7 1088 aaKnown RBP18.36■□□□□ 0.53
PHRF1-205ENST00000533464 MRPL46Q9H2W6 279 aaKnown RBP18.36■□□□□ 0.53
PHRF1-205ENST00000533464 OLA1Q9NTK5 396 aaKnown RBP18.36■□□□□ 0.53
PHRF1-205ENST00000533464 RIC1Q4ADV7 1423 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 ZBTB39O15060 712 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 NCAM1P13591 858 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 RAD23BP54727 409 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 PTGISQ16647 500 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 GLB1LQ6UWU2 654 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 SLC26A7Q8TE54 656 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 FAM237AA0A1B0GTK4 181 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 NEMP1O14524 444 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 PGM1P36871 562 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 NNMTP40261 264 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 CTCFP49711 727 aaPredicted RBP18.36■□□□□ 0.53
PHRF1-205ENST00000533464 ERFP50548 548 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 AP2B1P63010 937 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 USP10Q14694 798 aaKnown RBP18.36■□□□□ 0.53
PHRF1-205ENST00000533464 IMPG1Q17R60 797 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 ST13P4Q8IZP2 240 aaPredicted RBP18.36■□□□□ 0.53
PHRF1-205ENST00000533464 ERP27Q96DN0 273 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 PPP1R36Q96LQ0 422 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 PPME1Q9Y570 386 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 TRIM66O15016 1216 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 STIP1P31948 543 aaKnown RBP18.35■□□□□ 0.53
PHRF1-205ENST00000533464 MYL6P60660 151 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 FAXCQ5TGI0 409 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 ACOT1Q86TX2 421 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 TRIML2Q8N7C3 387 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 IL17RAQ96F46 866 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 ZFYVE28Q9HCC9 887 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 ARHGAP23Q9P227 1491 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 TMEM150BA6NC51 233 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 MAP3K6O95382 1288 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 ENO1P06733 434 aaKnown RBP18.35■□□□□ 0.53
PHRF1-205ENST00000533464 FAM200BP0CF97 657 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 PNPLA4P41247 253 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 UGP2Q16851 508 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 ZNF484Q5JVG2 852 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 ELMSAN1Q6PJG2 1045 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 LVRNQ6Q4G3 990 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 PTPRN2Q92932 1015 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 TATDN2Q93075 761 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 NDFIP2Q9NV92 336 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 LRRC10BA6NIK2 292 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 GLI1P08151 1106 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 ATXN8OSP0DMR3 200 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 CUL3Q13618 768 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 KIZQ2M2Z5 673 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 TRPM8Q7Z2W7 1104 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 DDIASQ8IXT1 998 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 SLC5A5Q92911 643 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 FAM129AQ9BZQ8 928 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 TRPV6Q9H1D0 765 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 PDHA1P08559 390 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 FOXD4Q12950 439 aaPredicted RBP18.35■□□□□ 0.53
PHRF1-205ENST00000533464 DCAF4L1Q3SXM0 396 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 MDH1BQ5I0G3 518 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 RPAINQ86UA6 219 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 RIBC1Q8N443 379 aaPredicted RBP18.35■□□□□ 0.53
PHRF1-205ENST00000533464 KRT35Q92764 455 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 ANKZF1Q9H8Y5 726 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 NDE1Q9NXR1 346 aa18.35■□□□□ 0.53
PHRF1-205ENST00000533464 VWA5AO00534 786 aa18.34■□□□□ 0.53
PHRF1-205ENST00000533464 BMP6P22004 513 aa18.34■□□□□ 0.53
PHRF1-205ENST00000533464 FBXW10Q5XX13 1052 aa18.34■□□□□ 0.53
PHRF1-205ENST00000533464 LRRN4CLQ8ND94 238 aa18.34■□□□□ 0.53
PHRF1-205ENST00000533464 SERPINB12Q96P63 405 aa18.34■□□□□ 0.53
PHRF1-205ENST00000533464 CISHQ9NSE2 258 aa18.34■□□□□ 0.53
PHRF1-205ENST00000533464 VTNP04004 478 aa18.34■□□□□ 0.53
PHRF1-205ENST00000533464 STAG3L1P0CL83 205 aa18.34■□□□□ 0.53
PHRF1-205ENST00000533464 TGFB2P61812 414 aa18.34■□□□□ 0.53
PHRF1-205ENST00000533464 MRPL40Q9NQ50 206 aaKnown RBP18.34■□□□□ 0.53
PHRF1-205ENST00000533464 GAKO14976 1311 aa18.34■□□□□ 0.53
PHRF1-205ENST00000533464 POLBP06746 335 aa18.34■□□□□ 0.53
PHRF1-205ENST00000533464 GFAPP14136 432 aa18.34■□□□□ 0.53
PHRF1-205ENST00000533464 METTL7BQ6UX53 244 aa18.34■□□□□ 0.53
PHRF1-205ENST00000533464 MROH8Q9H579 483 aa18.34■□□□□ 0.53
PHRF1-205ENST00000533464 KCNH4Q9UQ05 1017 aa18.34■□□□□ 0.53
PHRF1-205ENST00000533464 CELF2O95319 508 aaKnown RBP18.34■□□□□ 0.53
PHRF1-205ENST00000533464 VDRP11473 427 aa18.34■□□□□ 0.53
PHRF1-205ENST00000533464 HADHAP40939 763 aa18.34■□□□□ 0.53
PHRF1-205ENST00000533464 ANO4Q32M45 955 aa18.34■□□□□ 0.53
PHRF1-205ENST00000533464 PSMD3O43242 534 aa18.33■□□□□ 0.53
PHRF1-205ENST00000533464 MGEA5O60502 916 aa18.33■□□□□ 0.53
PHRF1-205ENST00000533464 CSDE1O75534 798 aaKnown RBP18.33■□□□□ 0.53
PHRF1-205ENST00000533464 PROSCO94903 275 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms