RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 PDCL2Q8N4E4 241 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 TTC9BQ8N6N2 239 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 LEO1Q8WVC0 666 aaPredicted RBP25.22■■□□□ 1.63
SMPD1-209ENST00000533196 SCFD1Q8WVM8 642 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 FOXQ1Q9C009 403 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 MTMR12Q9C0I1 747 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 SLITRK6Q9H5Y7 841 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 BRD9Q9H8M2 597 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 AGPAT3Q9NRZ7 376 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 SIX4Q9UIU6 781 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 ZMYM5Q9UJ78 669 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 L1RE1Q9UN81 338 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 NRG2O14511 850 aaPredicted RBP25.21■■□□□ 1.63
SMPD1-209ENST00000533196 TGFB1I1O43294 461 aa25.21■■□□□ 1.63
SMPD1-209ENST00000533196 DCNP07585 359 aaKnown RBP25.21■■□□□ 1.63
SMPD1-209ENST00000533196 WEE1P30291 646 aa25.21■■□□□ 1.63
SMPD1-209ENST00000533196 BFSP1Q12934 665 aa25.21■■□□□ 1.63
SMPD1-209ENST00000533196 DUOXA2Q1HG44 320 aa25.21■■□□□ 1.63
SMPD1-209ENST00000533196 ARHGAP15Q53QZ3 475 aa25.21■■□□□ 1.63
SMPD1-209ENST00000533196 VITQ6UXI7 678 aa25.21■■□□□ 1.63
SMPD1-209ENST00000533196 MFSD6LQ8IWD5 586 aa25.21■■□□□ 1.63
SMPD1-209ENST00000533196 FAM200AQ8TCP9 573 aa25.21■■□□□ 1.63
SMPD1-209ENST00000533196 BLZF1Q9H2G9 400 aa25.21■■□□□ 1.63
SMPD1-209ENST00000533196 LTB4R2Q9NPC1 389 aa25.21■■□□□ 1.63
SMPD1-209ENST00000533196 USP25Q9UHP3 1055 aa25.21■■□□□ 1.63
SMPD1-209ENST00000533196 MRPS17Q9Y2R5 130 aaKnown RBP25.21■■□□□ 1.63
SMPD1-209ENST00000533196 DENND4CQ5VZ89 1909 aa25.2■■□□□ 1.62
SMPD1-209ENST00000533196 RIF1Q5UIP0 2472 aaKnown RBP25.2■■□□□ 1.62
SMPD1-209ENST00000533196 GFRA3O60609 400 aa25.2■■□□□ 1.62
SMPD1-209ENST00000533196 PRPF40AO75400 957 aaKnown RBP25.2■■□□□ 1.62
SMPD1-209ENST00000533196 ATF6P18850 670 aa25.2■■□□□ 1.62
SMPD1-209ENST00000533196 CMA1P23946 247 aa25.2■■□□□ 1.62
SMPD1-209ENST00000533196 CDC25CP30307 473 aa25.2■■□□□ 1.62
SMPD1-209ENST00000533196 LHX1P48742 406 aa25.2■■□□□ 1.62
SMPD1-209ENST00000533196 KRT85P78386 507 aa25.2■■□□□ 1.62
SMPD1-209ENST00000533196 SNRNP35Q16560 246 aaKnown RBP25.2■■□□□ 1.62
SMPD1-209ENST00000533196 GAREM2Q75VX8 874 aa25.2■■□□□ 1.62
SMPD1-209ENST00000533196 C12orf56Q8IXR9 622 aa25.2■■□□□ 1.62
SMPD1-209ENST00000533196 XXYLT1Q8NBI6 393 aa25.2■■□□□ 1.62
SMPD1-209ENST00000533196 BCO2Q9BYV7 579 aa25.2■■□□□ 1.62
SMPD1-209ENST00000533196 ATXN3LQ9H3M9 355 aa25.2■■□□□ 1.62
SMPD1-209ENST00000533196 ZNF334Q9HCZ1 680 aaPredicted RBP25.2■■□□□ 1.62
SMPD1-209ENST00000533196 ABCB6Q9NP58 842 aa25.2■■□□□ 1.62
SMPD1-209ENST00000533196 DDX43Q9NXZ2 648 aaKnown RBP25.2■■□□□ 1.62
SMPD1-209ENST00000533196 SNX9Q9Y5X1 595 aa25.2■■□□□ 1.62
SMPD1-209ENST00000533196 ZFHX2Q9C0A1 2572 aaPredicted RBP25.19■■□□□ 1.62
SMPD1-209ENST00000533196 MAN2B1O00754 1011 aa25.19■■□□□ 1.62
SMPD1-209ENST00000533196 NCAM2O15394 837 aa25.19■■□□□ 1.62
SMPD1-209ENST00000533196 SOAT2O75908 522 aa25.19■■□□□ 1.62
SMPD1-209ENST00000533196 MYL1P05976 194 aa25.19■■□□□ 1.62
SMPD1-209ENST00000533196 GABRR2P28476 465 aa25.19■■□□□ 1.62
SMPD1-209ENST00000533196 AFMP43652 599 aa25.19■■□□□ 1.62
SMPD1-209ENST00000533196 CUL4BQ13620 913 aa25.19■■□□□ 1.62
SMPD1-209ENST00000533196 GRM2Q14416 872 aa25.19■■□□□ 1.62
SMPD1-209ENST00000533196 TAF12Q16514 161 aa25.19■■□□□ 1.62
SMPD1-209ENST00000533196 INTS6LQ5JSJ4 861 aaKnown RBP25.19■■□□□ 1.62
SMPD1-209ENST00000533196 ZNF852Q6ZMS4 543 aa25.19■■□□□ 1.62
SMPD1-209ENST00000533196 TPRG1Q6ZUI0 275 aa25.19■■□□□ 1.62
SMPD1-209ENST00000533196 OR5B17Q8NGF7 314 aa25.19■■□□□ 1.62
SMPD1-209ENST00000533196 OBP2AQ9NY56 170 aa25.19■■□□□ 1.62
SMPD1-209ENST00000533196 ABI2Q9NYB9 513 aaPredicted RBP25.19■■□□□ 1.62
SMPD1-209ENST00000533196 SERTAD1Q9UHV2 236 aa25.19■■□□□ 1.62
SMPD1-209ENST00000533196 FAM186AA6NE01 2351 aa25.19■■□□□ 1.62
SMPD1-209ENST00000533196 PTPRZ1P23471 2315 aaPredicted RBP25.19■■□□□ 1.62
SMPD1-209ENST00000533196 GABRDO14764 452 aa25.18■■□□□ 1.62
SMPD1-209ENST00000533196 ACTN4O43707 911 aaKnown RBP25.18■■□□□ 1.62
SMPD1-209ENST00000533196 PCSK1P29120 753 aa25.18■■□□□ 1.62
SMPD1-209ENST00000533196 GDI1P31150 447 aa25.18■■□□□ 1.62
SMPD1-209ENST00000533196 VIPR2P41587 438 aa25.18■■□□□ 1.62
SMPD1-209ENST00000533196 MLLT6P55198 1093 aaPredicted RBP25.18■■□□□ 1.62
SMPD1-209ENST00000533196 PSMD2Q13200 908 aa25.18■■□□□ 1.62
SMPD1-209ENST00000533196 UBXN2BQ14CS0 331 aa25.18■■□□□ 1.62
SMPD1-209ENST00000533196 C1orf210Q8IVY1 113 aa25.18■■□□□ 1.62
SMPD1-209ENST00000533196 NELFCDQ8IXH7 590 aa25.18■■□□□ 1.62
SMPD1-209ENST00000533196 GOLGA5Q8TBA6 731 aa25.18■■□□□ 1.62
SMPD1-209ENST00000533196 HPDLQ96IR7 371 aa25.18■■□□□ 1.62
SMPD1-209ENST00000533196 SPATA32Q96LK8 384 aa25.18■■□□□ 1.62
SMPD1-209ENST00000533196 GCNAQ96QF7 691 aa25.18■■□□□ 1.62
SMPD1-209ENST00000533196 FNBP1Q96RU3 617 aa25.18■■□□□ 1.62
SMPD1-209ENST00000533196 LPIN3Q9BQK8 851 aa25.18■■□□□ 1.62
SMPD1-209ENST00000533196 SLC39A2Q9NP94 309 aa25.18■■□□□ 1.62
SMPD1-209ENST00000533196 HEBP1Q9NRV9 189 aa25.18■■□□□ 1.62
SMPD1-209ENST00000533196 ATP6V1DQ9Y5K8 247 aa25.18■■□□□ 1.62
SMPD1-209ENST00000533196 TICRRQ7Z2Z1 1910 aa25.18■■□□□ 1.62
SMPD1-209ENST00000533196 COL4A2P08572 1712 aa25.17■■□□□ 1.62
SMPD1-209ENST00000533196 FANCMQ8IYD8 2048 aa25.17■■□□□ 1.62
SMPD1-209ENST00000533196 FAM170BA6NMN3 283 aa25.17■■□□□ 1.62
SMPD1-209ENST00000533196 HEPACAM2A8MVW5 462 aa25.17■■□□□ 1.62
SMPD1-209ENST00000533196 ZNF263O14978 683 aa25.17■■□□□ 1.62
SMPD1-209ENST00000533196 GLULP15104 373 aa25.17■■□□□ 1.62
SMPD1-209ENST00000533196 CASP1P29466 404 aa25.17■■□□□ 1.62
SMPD1-209ENST00000533196 PSMD6Q15008 389 aa25.17■■□□□ 1.62
SMPD1-209ENST00000533196 KNOP1Q1ED39 458 aaKnown RBP25.17■■□□□ 1.62
SMPD1-209ENST00000533196 LMBRD2Q68DH5 695 aaPredicted RBP25.17■■□□□ 1.62
SMPD1-209ENST00000533196 LIMS2Q7Z4I7 341 aa25.17■■□□□ 1.62
SMPD1-209ENST00000533196 ADGRF2Q8IZF7 708 aa25.17■■□□□ 1.62
SMPD1-209ENST00000533196 NKD2Q969F2 451 aaPredicted RBP25.17■■□□□ 1.62
SMPD1-209ENST00000533196 PAGE5Q96GU1 130 aa25.17■■□□□ 1.62
SMPD1-209ENST00000533196 TASP1Q9H6P5 420 aa25.17■■□□□ 1.62
SMPD1-209ENST00000533196 IL21Q9HBE4 155 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms