RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	NMT1	P30419	496 aa	Known RBP	10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	DDIT3	P35638	169 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	COPS2	P61201	443 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	GTF2B	Q00403	316 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	SMARCB1	Q12824	385 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	MTAP	Q13126	283 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	PUM1	Q14671	1186 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	PTPA	Q15257	358 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	SV2C	Q496J9	727 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	SLC39A12	Q504Y0	691 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	GPR158	Q5T848	1215 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	C9orf57	Q5W0N0	161 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	CENPP	Q6IPU0	288 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	TSSK4	Q6SA08	328 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	DYM	Q7RTS9	669 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	MAML2	Q8IZL2	1156 aa	Predicted RBP	10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	SYCP3	Q8IZU3	236 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	SHKBP1	Q8TBC3	707 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	C2orf15	Q8WU43	125 aa	Known RBP	10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	HVCN1	Q96D96	273 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	ZSWIM3	Q96MP5	696 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	CCSER1	Q9C0I3	900 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	CHRD	Q9H2X0	955 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	C8orf33	Q9H7E9	229 aa	Predicted RBP	10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	MRPL44	Q9H9J2	332 aa	Known RBP	10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	LMAN1L	Q9HAT1	526 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	TRPV4	Q9HBA0	871 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	THG1L	Q9NWX6	298 aa	Known RBP	10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	SMG5	Q9UPR3	1016 aa	Known RBP	10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	C2CD2	Q9Y426	696 aa		10.41	□□□□□ -0.74
PPFIA1-223	ENST00000532793	PTPRZ1	P23471	2315 aa	Predicted RBP	10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	PIR	O00625	290 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	CYB561D2	O14569	222 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	CHAD	O15335	359 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	IL18RAP	O95256	599 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	CD2BP2	O95400	341 aa	Known RBP	10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	LDHA	P00338	332 aa	Known RBP	10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	GAP43	P17677	238 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	CCNE1	P24864	410 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	CDC25C	P30307	473 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	PNPLA4	P41247	253 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	TSPY1	Q01534	308 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	ARHGAP29	Q52LW3	1261 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	RRAGB	Q5VZM2	374 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	SV2B	Q7L1I2	683 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	SFR1	Q86XK3	245 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	NT5DC4	Q86YG4	428 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	ARID3B	Q8IVW6	561 aa	Predicted RBP	10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	DCP1B	Q8IZD4	617 aa	Known RBP	10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	DCLK2	Q8N568	766 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	SUMF1	Q8NBK3	374 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	ATAD1	Q8NBU5	361 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	SPPL2B	Q8TCT7	592 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	NOC3L	Q8WTT2	800 aa	Known RBP	10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	CACTIN	Q8WUQ7	758 aa	Known RBP	10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	PSMG2	Q969U7	264 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	ST6GALNAC4	Q9H4F1	302 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	PRMT8	Q9NR22	394 aa	Predicted RBP	10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	DPP3	Q9NY33	737 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	SEL1L	Q9UBV2	794 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	ZMYM5	Q9UJ78	669 aa		10.4	□□□□□ -0.74
PPFIA1-223	ENST00000532793	OBSL1	O75147	1896 aa		10.4	□□□□□ -0.75
PPFIA1-223	ENST00000532793	RALGAPA1	Q6GYQ0	2036 aa		10.4	□□□□□ -0.75
PPFIA1-223	ENST00000532793	SLC38A8	A6NNN8	435 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	ANKRD63	C9JTQ0	380 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	PPEF2	O14830	753 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	FAM189A1	O60320	539 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	MOSPD3	O75425	235 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	GCNT3	O95395	438 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	CYP11A1	P05108	521 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	ADRB2	P07550	413 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	IDE	P14735	1019 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	STAT6	P42226	847 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	CXCL12	P48061	93 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	MLLT6	P55198	1093 aa	Predicted RBP	10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	TFAM	Q00059	246 aa	Known RBP	10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	PLCB2	Q00722	1185 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	POU5F1	Q01860	360 aa	Known RBP	10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	GRIN1	Q05586	938 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	ALCAM	Q13740	583 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	CCDC73	Q6ZRK6	1079 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	PRR23B	Q6ZRT6	265 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	STXBP4	Q6ZWJ1	553 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	RALGPS2	Q86X27	583 aa	Predicted RBP	10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	TMC8	Q8IU68	726 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	TMEM130	Q8N3G9	435 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	ZBTB44	Q8NCP5	570 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	BPIFB1	Q8TDL5	484 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	RMDN1	Q96DB5	314 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	EPSTI1	Q96J88	318 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	ACCS	Q96QU6	501 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	ZCWPW1	Q9H0M4	648 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	DNAJC25	Q9H1X3	360 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	EPC1	Q9H2F5	836 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	OBP2A	Q9NY56	170 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	ABI2	Q9NYB9	513 aa	Predicted RBP	10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	USP18	Q9UMW8	372 aa		10.39	□□□□□ -0.75
PPFIA1-223	ENST00000532793	ANO9	A1A5B4	782 aa		10.38	□□□□□ -0.75

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