RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-232ENST00000532649 ATP11BQ9Y2G3 1177 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 COPEO14579 308 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 PTPRAP18433 802 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 ACADSBP45954 432 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 ALDH5A1P51649 535 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-232ENST00000532649 NR1I3Q14994 352 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 IRAK1BP1Q5VVH5 260 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 KDELC2Q7Z4H8 507 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 YY1AP1Q9H869 796 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 EML4Q9HC35 981 aaKnown RBP9.13□□□□□ -0.95
CTNND1-232ENST00000532649 TMEM161AQ9NX61 479 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 CACNA2D2Q9NY47 1150 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 PPP1R3GB7ZBB8 358 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 B3GAT3O94766 335 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 GFAPP14136 432 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 CLCN6P51797 869 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 OAZ1P54368 228 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 ERVK-9P63128 1117 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 ERVK-24P63145 666 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 HPCAP84074 193 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 DMC1Q14565 340 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 NTRK3Q16288 839 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 OR6P1Q8NGX9 317 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 SLC7A14Q8TBB6 771 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 SETD4Q9NVD3 440 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 APOBEC2Q9Y235 224 aaKnown RBP9.13□□□□□ -0.95
CTNND1-232ENST00000532649 SH3BP1Q9Y3L3 701 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 MRFAP1Q9Y605 127 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 RALBP11234 206 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 CYP2C19P33261 490 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 PPP3CCP48454 512 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 FXR1P51114 621 aaKnown RBP eCLIP9.13□□□□□ -0.95
CTNND1-232ENST00000532649 PMS1P54277 932 aaKnown RBP9.13□□□□□ -0.95
CTNND1-232ENST00000532649 CCDC15Q0P6D6 951 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 PDIA2Q13087 525 aaKnown RBP9.13□□□□□ -0.95
CTNND1-232ENST00000532649 ANGPT1Q15389 498 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 EPC2Q52LR7 807 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 GJB7Q6PEY0 223 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 TRIM48Q8IWZ4 208 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 PPM1NQ8N819 430 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 MTMR12Q9C0I1 747 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 VPS11Q9H270 941 aa9.13□□□□□ -0.95
CTNND1-232ENST00000532649 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-232ENST00000532649 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.13□□□□□ -0.952e-7■■□□□ 14.4
CTNND1-232ENST00000532649 SSU72P8A0A1W2PR75 194 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 ESYT3A0FGR9 886 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 TEX28O15482 410 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 KCNN4O15554 427 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 KPNA6O60684 536 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 RPSAP08865 295 aaKnown RBP9.12□□□□□ -0.95
CTNND1-232ENST00000532649 FAM200BP0CF97 657 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 GUCA1AP43080 201 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-232ENST00000532649 ARSEP51690 589 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 GIT2Q14161 759 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 DCAF6Q58WW2 860 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 C15orf52Q6ZUT6 534 aaKnown RBP9.12□□□□□ -0.95
CTNND1-232ENST00000532649 C4orf19Q8IY42 314 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 RCOR2Q8IZ40 523 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 SOCS4Q8WXH5 440 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 TTC17Q96AE7 1141 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 SNF8Q96H20 258 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 NAGPAQ9UK23 515 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 A0A087WZ62 844 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 LRRIQ3A6PVS8 624 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-232ENST00000532649 SUPT3HO75486 399 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 TRPC1P48995 793 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 PCYT1AP49585 367 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 POU5F1BQ06416 359 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 SFSWAPQ12872 951 aaKnown RBP9.12□□□□□ -0.95
CTNND1-232ENST00000532649 PIGHQ14442 188 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-232ENST00000532649 KLHL38Q2WGJ6 581 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 CBWD2Q8IUF1 395 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 DDIASQ8IXT1 998 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 GSPT2Q8IYD1 628 aaKnown RBP9.12□□□□□ -0.95
CTNND1-232ENST00000532649 ZBED8Q8IZ13 594 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 CERS5Q8N5B7 392 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 HES6Q96HZ4 224 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 OSMRQ99650 979 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 FDXACB1Q9BRP7 624 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-232ENST00000532649 MKL2Q9ULH7 1088 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 PCDHAC2Q9Y5I4 1007 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 GAKO14976 1311 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 ATP9BO43861 1147 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 TGFB3P10600 412 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 NR1D1P20393 614 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 POLE2P56282 527 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 UBE3AQ05086 875 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 FAM133BQ5BKY9 247 aaKnown RBP9.12□□□□□ -0.95
CTNND1-232ENST00000532649 KLHDC7AQ5VTJ3 777 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 IZUMO3Q5VZ72 239 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 ANKRD49Q8WVL7 239 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 TADA1Q96BN2 335 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 MED1Q15648 1581 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-232ENST00000532649 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-232ENST00000532649 TARSL2A2RTX5 802 aaKnown RBP9.12□□□□□ -0.95
CTNND1-232ENST00000532649 EEF2KO00418 725 aaKnown RBP9.12□□□□□ -0.95
CTNND1-232ENST00000532649 ATMINO43313 823 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-232ENST00000532649 LRG1P02750 347 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 HIST1H2AGP0C0S8 130 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms