RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 APOEP02649 317 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 XPAP23025 273 aaPredicted RBP16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 SH3BGRP55822 239 aaPredicted RBP16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 ERVK-9P63128 1117 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 TMEM139Q8IV31 216 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 RAPGEF5Q92565 580 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 N4BP2L2Q92802 583 aaPredicted RBP16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 MTFR1LQ9H019 292 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 SCOCQ9UIL1 159 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 PDE2AO00408 941 aaPredicted RBP16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 SERPINB9P50453 376 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 DEUP1Q05D60 604 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 FBXO16Q8IX29 292 aaPredicted RBP16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 MCOLN2Q8IZK6 566 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 EPS8L3Q8TE67 593 aaKnown RBP16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 TSSK1BQ9BXA7 367 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 DPP3Q9NY33 737 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 RCCD1A6NED2 376 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 CHEK2O96017 543 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 VDRP11473 427 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 EFHC1Q5JVL4 640 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 HIPK4Q8NE63 616 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 TTC8Q8TAM2 541 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 AENQ8WTP8 325 aaKnown RBP16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 GANQ9H2C0 597 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 UBQLN1Q9UMX0 589 aaKnown RBP16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 CTSHP09668 335 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 CYP2C8P10632 490 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 C1QBPQ07021 282 aaKnown RBP16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 CCNG2Q16589 344 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 DCAF4L1Q3SXM0 396 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 HYIQ5T013 277 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 TATDN1Q6P1N9 297 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 SDCCAG3Q96C92 435 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 IFT43Q96FT9 208 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 CDC42EP4Q9H3Q1 356 aaKnown RBP16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 TRIM33Q9UPN9 1127 aa16.04■□□□□ 0.16
PCDHA3-202ENST00000532566 CAND2O75155 1236 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 GNL1P36915 607 aaPredicted RBP16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 CTCFP49711 727 aaPredicted RBP16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 POU5F1BQ06416 359 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 CD302Q8IX05 232 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 HSD17B14Q9BPX1 270 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 FRMD8P1Q9BZ68 369 aaPredicted RBP16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 ADARB2Q9NS39 739 aaKnown RBP16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 ZNF446Q9NWS9 450 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 BAG5Q9UL15 447 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 SNRPAP09012 282 aaKnown RBP16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 PEX19P40855 299 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 CORO7P57737 925 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 AFG1LQ8WV93 481 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 KLF6Q99612 283 aaPredicted RBP16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 SLC38A7Q9NVC3 462 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 GTSE1Q9NYZ3 720 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 PARP4Q9UKK3 1724 aaKnown RBP16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 CCT8L1PA6NM43 557 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 SPATA31C1P0DKV0 1188 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 CYP2B6P20813 491 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 PNPLA4P41247 253 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 PRAMEP78395 509 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 PPP3CAQ08209 521 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 GRAMD1BQ3KR37 738 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 ANKRD20A4Q4UJ75 823 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 DCAF6Q58WW2 860 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 ANKRD20A8PQ5CZ79 823 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 ANKRD20A2Q5SQ80 823 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 ANKRD20A1Q5TYW2 823 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 C1orf146Q5VVC0 180 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 FBXW10Q5XX13 1052 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 C4orf22Q6V702 233 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 OR6P1Q8NGX9 317 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 KCTD10Q9H3F6 313 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 SP110Q9HB58 689 aa16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 A1CFQ9NQ94 594 aaKnown RBP16.03■□□□□ 0.16
PCDHA3-202ENST00000532566 MAP2K7O14733 419 aa16.02■□□□□ 0.16
PCDHA3-202ENST00000532566 TAF6P49848 677 aa16.02■□□□□ 0.16
PCDHA3-202ENST00000532566 ORC1Q13415 861 aa16.02■□□□□ 0.16
PCDHA3-202ENST00000532566 PDK1Q15118 436 aa16.02■□□□□ 0.16
PCDHA3-202ENST00000532566 KCNT1Q5JUK3 1230 aa16.02■□□□□ 0.16
PCDHA3-202ENST00000532566 MTHFD1LQ6UB35 978 aa16.02■□□□□ 0.16
PCDHA3-202ENST00000532566 C3orf20Q8ND61 904 aa16.02■□□□□ 0.16
PCDHA3-202ENST00000532566 ATXN7L3BQ96GX2 97 aa16.02■□□□□ 0.16
PCDHA3-202ENST00000532566 CLMNQ96JQ2 1002 aa16.02■□□□□ 0.16
PCDHA3-202ENST00000532566 FAM161BQ96MY7 647 aa16.02■□□□□ 0.16
PCDHA3-202ENST00000532566 NPHS2Q9NP85 383 aa16.02■□□□□ 0.16
PCDHA3-202ENST00000532566 TISP43B9A030 160 aa16.02■□□□□ 0.16
PCDHA3-202ENST00000532566 STAG3L1P0CL83 205 aa16.02■□□□□ 0.16
PCDHA3-202ENST00000532566 PCSK1P29120 753 aa16.02■□□□□ 0.16
PCDHA3-202ENST00000532566 PPARGP37231 505 aaPredicted RBP16.02■□□□□ 0.16
PCDHA3-202ENST00000532566 LAMTOR4Q0VGL1 99 aa16.02■□□□□ 0.16
PCDHA3-202ENST00000532566 ZNF606Q8WXB4 792 aa16.02■□□□□ 0.16
PCDHA3-202ENST00000532566 C3orf70A6NLC5 250 aaPredicted RBP16.02■□□□□ 0.15
PCDHA3-202ENST00000532566 RNF225M0QZC1 329 aaPredicted RBP16.02■□□□□ 0.15
PCDHA3-202ENST00000532566 AP3B1O00203 1094 aa16.02■□□□□ 0.15
PCDHA3-202ENST00000532566 HNRNPCL1O60812 293 aaKnown RBP16.02■□□□□ 0.15
PCDHA3-202ENST00000532566 RPS6KA5O75582 802 aa16.02■□□□□ 0.15
PCDHA3-202ENST00000532566 ZPBP2Q6X784 338 aa16.02■□□□□ 0.15
PCDHA3-202ENST00000532566 NOP9Q86U38 636 aaKnown RBP16.02■□□□□ 0.15
PCDHA3-202ENST00000532566 VSIG10LQ86VR7 867 aa16.02■□□□□ 0.15
PCDHA3-202ENST00000532566 SMYD3Q9H7B4 428 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms