RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 CHMP5Q9NZZ3 219 aa24.65■■□□□ 1.54
CAPN1-222ENST00000532285 PCDHB5Q9Y5E4 795 aa24.65■■□□□ 1.54
CAPN1-222ENST00000532285 NUMBLQ9Y6R0 609 aa24.65■■□□□ 1.54
CAPN1-222ENST00000532285 LRRIQ3A6PVS8 624 aaPredicted RBP24.64■■□□□ 1.54
CAPN1-222ENST00000532285 MAPK13O15264 365 aa24.64■■□□□ 1.54
CAPN1-222ENST00000532285 STAU1O95793 577 aaKnown RBP24.64■■□□□ 1.54
CAPN1-222ENST00000532285 CEBPBP17676 345 aa24.64■■□□□ 1.54
CAPN1-222ENST00000532285 NR2F2P24468 414 aa24.64■■□□□ 1.54
CAPN1-222ENST00000532285 RPL13P26373 211 aaKnown RBP24.64■■□□□ 1.54
CAPN1-222ENST00000532285 ATICP31939 592 aa24.64■■□□□ 1.54
CAPN1-222ENST00000532285 MGAT5BQ3V5L5 792 aa24.64■■□□□ 1.54
CAPN1-222ENST00000532285 PARM1Q6UWI2 310 aa24.64■■□□□ 1.54
CAPN1-222ENST00000532285 ITIH5Q86UX2 942 aa24.64■■□□□ 1.54
CAPN1-222ENST00000532285 SUGP1Q8IWZ8 645 aaKnown RBP24.64■■□□□ 1.54
CAPN1-222ENST00000532285 ELOA2Q8IYF1 753 aaPredicted RBP24.64■■□□□ 1.54
CAPN1-222ENST00000532285 FBXL6Q8N531 539 aa24.64■■□□□ 1.54
CAPN1-222ENST00000532285 SPATA20Q8TB22 786 aa24.64■■□□□ 1.54
CAPN1-222ENST00000532285 FGF14Q92915 247 aa24.64■■□□□ 1.54
CAPN1-222ENST00000532285 SMARCE1Q969G3 411 aa24.64■■□□□ 1.54
CAPN1-222ENST00000532285 MCRS1Q96EZ8 462 aa24.64■■□□□ 1.54
CAPN1-222ENST00000532285 SEPT5Q99719 369 aaPredicted RBP24.64■■□□□ 1.54
CAPN1-222ENST00000532285 GTPBP4Q9BZE4 634 aaKnown RBP24.64■■□□□ 1.54
CAPN1-222ENST00000532285 DNAJC25Q9H1X3 360 aa24.64■■□□□ 1.54
CAPN1-222ENST00000532285 ABI2Q9NYB9 513 aaPredicted RBP24.64■■□□□ 1.54
CAPN1-222ENST00000532285 SOAT2O75908 522 aa24.63■■□□□ 1.53
CAPN1-222ENST00000532285 MYL4P12829 197 aa24.63■■□□□ 1.53
CAPN1-222ENST00000532285 CCR2P41597 374 aa24.63■■□□□ 1.53
CAPN1-222ENST00000532285 BIRC3Q13489 604 aa24.63■■□□□ 1.53
CAPN1-222ENST00000532285 INTS6LQ5JSJ4 861 aaKnown RBP24.63■■□□□ 1.53
CAPN1-222ENST00000532285 ZNF658Q5TYW1 1059 aaPredicted RBP24.63■■□□□ 1.53
CAPN1-222ENST00000532285 OSTM1Q86WC4 334 aa24.63■■□□□ 1.53
CAPN1-222ENST00000532285 PSMG2Q969U7 264 aa24.63■■□□□ 1.53
CAPN1-222ENST00000532285 SYAP1Q96A49 352 aaPredicted RBP24.63■■□□□ 1.53
CAPN1-222ENST00000532285 MMS19Q96T76 1030 aa24.63■■□□□ 1.53
CAPN1-222ENST00000532285 PCDHA5Q9Y5H7 936 aa24.63■■□□□ 1.53
CAPN1-222ENST00000532285 ZNF318Q5VUA4 2279 aa24.62■■□□□ 1.53
CAPN1-222ENST00000532285 IKBKBO14920 756 aa24.62■■□□□ 1.53
CAPN1-222ENST00000532285 NARSO43776 548 aaKnown RBP24.62■■□□□ 1.53
CAPN1-222ENST00000532285 KINO60870 393 aaKnown RBP24.62■■□□□ 1.53
CAPN1-222ENST00000532285 C4BPAP04003 597 aaKnown RBP24.62■■□□□ 1.53
CAPN1-222ENST00000532285 FAM163BP0C2L3 166 aa24.62■■□□□ 1.53
CAPN1-222ENST00000532285 HAPLN1P10915 354 aaPredicted RBP24.62■■□□□ 1.53
CAPN1-222ENST00000532285 SRFP11831 508 aa24.62■■□□□ 1.53
CAPN1-222ENST00000532285 ACAT1P24752 427 aaKnown RBP24.62■■□□□ 1.53
CAPN1-222ENST00000532285 CDR1P51861 262 aa24.62■■□□□ 1.53
CAPN1-222ENST00000532285 MYL6P60660 151 aa24.62■■□□□ 1.53
CAPN1-222ENST00000532285 TNNC1P63316 161 aa24.62■■□□□ 1.53
CAPN1-222ENST00000532285 ADAM9Q13443 819 aa24.62■■□□□ 1.53
CAPN1-222ENST00000532285 VEPH1Q14D04 833 aa24.62■■□□□ 1.53
CAPN1-222ENST00000532285 WDR72Q3MJ13 1102 aa24.62■■□□□ 1.53
CAPN1-222ENST00000532285 COBLL1Q53SF7 1204 aa24.62■■□□□ 1.53
CAPN1-222ENST00000532285 TDRD10Q5VZ19 366 aaKnown RBP24.62■■□□□ 1.53
CAPN1-222ENST00000532285 DNAJB7Q7Z6W7 309 aaPredicted RBP24.62■■□□□ 1.53
CAPN1-222ENST00000532285 SMYD4Q8IYR2 804 aaPredicted RBP24.62■■□□□ 1.53
CAPN1-222ENST00000532285 KBTBD7Q8WVZ9 684 aa24.62■■□□□ 1.53
CAPN1-222ENST00000532285 LRRC3Q9BY71 257 aa24.62■■□□□ 1.53
CAPN1-222ENST00000532285 TMLHEQ9NVH6 421 aa24.62■■□□□ 1.53
CAPN1-222ENST00000532285 RAPGEFL1Q9UHV5 662 aa24.62■■□□□ 1.53
CAPN1-222ENST00000532285 FBXL21Q9UKT6 434 aa24.62■■□□□ 1.53
CAPN1-222ENST00000532285 KMT2EQ8IZD2 1858 aa24.62■■□□□ 1.53
CAPN1-222ENST00000532285 FGF19O95750 216 aa24.61■■□□□ 1.53
CAPN1-222ENST00000532285 WARSP23381 471 aaKnown RBP24.61■■□□□ 1.53
CAPN1-222ENST00000532285 DLG4P78352 724 aa24.61■■□□□ 1.53
CAPN1-222ENST00000532285 EDRF1Q3B7T1 1238 aa24.61■■□□□ 1.53
CAPN1-222ENST00000532285 ZCWPW2Q504Y3 356 aa24.61■■□□□ 1.53
CAPN1-222ENST00000532285 TMC8Q8IU68 726 aa24.61■■□□□ 1.53
CAPN1-222ENST00000532285 ST13P5Q8NFI4 369 aaPredicted RBP24.61■■□□□ 1.53
CAPN1-222ENST00000532285 FAM200AQ8TCP9 573 aa24.61■■□□□ 1.53
CAPN1-222ENST00000532285 PKMYT1Q99640 499 aa24.61■■□□□ 1.53
CAPN1-222ENST00000532285 RPP25Q9BUL9 199 aaKnown RBP24.61■■□□□ 1.53
CAPN1-222ENST00000532285 XYLT2Q9H1B5 865 aa24.61■■□□□ 1.53
CAPN1-222ENST00000532285 ABCB6Q9NP58 842 aa24.61■■□□□ 1.53
CAPN1-222ENST00000532285 WNT16Q9UBV4 365 aa24.61■■□□□ 1.53
CAPN1-222ENST00000532285 GTF3C4Q9UKN8 822 aa24.61■■□□□ 1.53
CAPN1-222ENST00000532285 CDH9Q9ULB4 789 aa24.61■■□□□ 1.53
CAPN1-222ENST00000532285 DENND4CQ5VZ89 1909 aa24.61■■□□□ 1.53
CAPN1-222ENST00000532285 GADD45BO75293 160 aaPredicted RBP24.6■■□□□ 1.53
CAPN1-222ENST00000532285 TACC1O75410 805 aa24.6■■□□□ 1.53
CAPN1-222ENST00000532285 MOSPD3O75425 235 aa24.6■■□□□ 1.53
CAPN1-222ENST00000532285 PSMC2P35998 433 aaKnown RBP24.6■■□□□ 1.53
CAPN1-222ENST00000532285 PRCPP42785 496 aa24.6■■□□□ 1.53
CAPN1-222ENST00000532285 INTS8Q75QN2 995 aaKnown RBP24.6■■□□□ 1.53
CAPN1-222ENST00000532285 FAM186BQ8IYM0 893 aa24.6■■□□□ 1.53
CAPN1-222ENST00000532285 ERCC4Q92889 916 aaPredicted RBP24.6■■□□□ 1.53
CAPN1-222ENST00000532285 PI4K2AQ9BTU6 479 aa24.6■■□□□ 1.53
CAPN1-222ENST00000532285 GPR88Q9GZN0 384 aa24.6■■□□□ 1.53
CAPN1-222ENST00000532285 VRTNQ9H8Y1 702 aa24.6■■□□□ 1.53
CAPN1-222ENST00000532285 ARIH1Q9Y4X5 557 aaPredicted RBP24.6■■□□□ 1.53
CAPN1-222ENST00000532285 PTPRDP23468 1912 aa24.59■■□□□ 1.53
CAPN1-222ENST00000532285 ECI2O75521 394 aa24.59■■□□□ 1.53
CAPN1-222ENST00000532285 AKAP3O75969 853 aa24.59■■□□□ 1.53
CAPN1-222ENST00000532285 PDGFBP01127 241 aaPredicted RBP24.59■■□□□ 1.53
CAPN1-222ENST00000532285 ATF6P18850 670 aa24.59■■□□□ 1.53
CAPN1-222ENST00000532285 LMO2P25791 158 aa24.59■■□□□ 1.53
CAPN1-222ENST00000532285 GNL1P36915 607 aaPredicted RBP24.59■■□□□ 1.53
CAPN1-222ENST00000532285 VAMP7P51809 220 aa24.59■■□□□ 1.53
CAPN1-222ENST00000532285 ENPEPQ07075 957 aa24.59■■□□□ 1.53
CAPN1-222ENST00000532285 NCOA4Q13772 614 aa24.59■■□□□ 1.53
CAPN1-222ENST00000532285 FAM171BQ6P995 826 aa24.59■■□□□ 1.53
CAPN1-222ENST00000532285 POTEHQ6S545 545 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms