RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 SKIP12755 728 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 CYP2B6P20813 491 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 RRM1P23921 792 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 PTPN7P35236 360 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 RDXP35241 583 aaKnown RBP13.02□□□□□ -0.33
CHD7-211ENST00000532149 TNNT3P45378 269 aaPredicted RBP13.02□□□□□ -0.33
CHD7-211ENST00000532149 PLA2G4AP47712 749 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 GABRB2P47870 512 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 PURAQ00577 322 aaKnown RBP13.02□□□□□ -0.33
CHD7-211ENST00000532149 GUCY2DQ02846 1103 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 CAV1Q03135 178 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 ZBTB6Q15916 424 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 HADHQ16836 314 aaKnown RBP13.02□□□□□ -0.33
CHD7-211ENST00000532149 SGO2Q562F6 1265 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 ODF2Q5BJF6 829 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 TMEM63BQ5T3F8 832 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 DNAJC24Q6P3W2 148 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 DCUN1D2Q6PH85 259 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 ALKAL1Q6UXT8 129 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 PCSK9Q8NBP7 692 aaKnown RBP13.02□□□□□ -0.33
CHD7-211ENST00000532149 BBOF1Q8ND07 529 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 SPATA18Q8TC71 538 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 IPO4Q8TEX9 1081 aaKnown RBP13.02□□□□□ -0.33
CHD7-211ENST00000532149 CPA5Q8WXQ8 436 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 SNX27Q96L92 541 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 ERP44Q9BS26 406 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 EPC1Q9H2F5 836 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 SLC38A7Q9NVC3 462 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 SIX4Q9UIU6 781 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 GOLGA6BA6NDN3 693 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 GOLGA8KD6RF30 607 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 RAD51CO43502 376 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 SEC31AO94979 1220 aaKnown RBP13.01□□□□□ -0.33
CHD7-211ENST00000532149 GJB1P08034 283 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 MYL3P08590 195 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 NFICP08651 508 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 RARBP10826 455 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 CST5P28325 142 aaPredicted RBP13.01□□□□□ -0.33
CHD7-211ENST00000532149 HOXA11P31270 313 aaPredicted RBP13.01□□□□□ -0.33
CHD7-211ENST00000532149 SCNN1AP37088 669 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 DR1Q01658 176 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 CRHR2Q13324 411 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 SEZ6Q53EL9 994 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 LCLAT1Q6UWP7 414 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 LRIG3Q6UXM1 1119 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 ARCQ7LC44 396 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 CXorf38Q8TB03 319 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 C18orf8Q96DM3 657 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 CELF4Q9BZC1 486 aaKnown RBP13.01□□□□□ -0.33
CHD7-211ENST00000532149 FOXP3Q9BZS1 431 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 TMEM51Q9NW97 253 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 GDAP2Q9NXN4 497 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 PSD3Q9NYI0 1048 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 NXF1Q9UBU9 619 aaKnown RBP13.01□□□□□ -0.33
CHD7-211ENST00000532149 MTRF1LQ9UGC7 380 aaKnown RBP13.01□□□□□ -0.33
CHD7-211ENST00000532149 AGAP1Q9UPQ3 857 aa13.01□□□□□ -0.33
CHD7-211ENST00000532149 MGAMO43451 1857 aa13□□□□□ -0.33
CHD7-211ENST00000532149 ARHGEF37A1IGU5 675 aa13□□□□□ -0.33
CHD7-211ENST00000532149 ZNF189O75820 626 aaPredicted RBP13□□□□□ -0.33
CHD7-211ENST00000532149 TJP3O95049 919 aa13□□□□□ -0.33
CHD7-211ENST00000532149 GAS8O95995 478 aa13□□□□□ -0.33
CHD7-211ENST00000532149 TFRCP02786 760 aaKnown RBP13□□□□□ -0.33
CHD7-211ENST00000532149 ERBB2P04626 1255 aa13□□□□□ -0.33
CHD7-211ENST00000532149 GLI1P08151 1106 aa13□□□□□ -0.33
CHD7-211ENST00000532149 CYBAP13498 195 aa13□□□□□ -0.33
CHD7-211ENST00000532149 CYP2C19P33261 490 aa13□□□□□ -0.33
CHD7-211ENST00000532149 RAB27AP51159 221 aa13□□□□□ -0.33
CHD7-211ENST00000532149 DNA2P51530 1060 aa13□□□□□ -0.33
CHD7-211ENST00000532149 RAD23BP54727 409 aa13□□□□□ -0.33
CHD7-211ENST00000532149 EIF3BP55884 814 aaKnown RBP13□□□□□ -0.33
CHD7-211ENST00000532149 OSTNP61366 133 aa13□□□□□ -0.33
CHD7-211ENST00000532149 SNX17Q15036 470 aa13□□□□□ -0.33
CHD7-211ENST00000532149 KIZQ2M2Z5 673 aa13□□□□□ -0.33
CHD7-211ENST00000532149 SV2CQ496J9 727 aa13□□□□□ -0.33
CHD7-211ENST00000532149 DRICH1Q6PGQ1 229 aaPredicted RBP13□□□□□ -0.33
CHD7-211ENST00000532149 VSIG1Q86XK7 387 aa13□□□□□ -0.33
CHD7-211ENST00000532149 KLHL7Q8IXQ5 586 aa13□□□□□ -0.33
CHD7-211ENST00000532149 TTC13Q8NBP0 860 aa13□□□□□ -0.33
CHD7-211ENST00000532149 ALG3Q92685 438 aa13□□□□□ -0.33
CHD7-211ENST00000532149 MAGOHBQ96A72 148 aaKnown RBP13□□□□□ -0.33
CHD7-211ENST00000532149 CPB2Q96IY4 423 aa13□□□□□ -0.33
CHD7-211ENST00000532149 C11orf70Q9BRQ4 267 aa13□□□□□ -0.33
CHD7-211ENST00000532149 TRAIPQ9BWF2 469 aa13□□□□□ -0.33
CHD7-211ENST00000532149 PRDM16Q9HAZ2 1276 aa13□□□□□ -0.33
CHD7-211ENST00000532149 UBN1Q9NPG3 1134 aa13□□□□□ -0.33
CHD7-211ENST00000532149 FLRT1Q9NZU1 646 aa13□□□□□ -0.33
CHD7-211ENST00000532149 HPCAL4Q9UM19 191 aa13□□□□□ -0.33
CHD7-211ENST00000532149 GPR182O15218 404 aa12.99□□□□□ -0.33
CHD7-211ENST00000532149 SASH3O75995 380 aa12.99□□□□□ -0.33
CHD7-211ENST00000532149 NPTXRO95502 500 aa12.99□□□□□ -0.33
CHD7-211ENST00000532149 KRT3P12035 628 aa12.99□□□□□ -0.33
CHD7-211ENST00000532149 CD19P15391 556 aa12.99□□□□□ -0.33
CHD7-211ENST00000532149 CD58P19256 250 aa12.99□□□□□ -0.33
CHD7-211ENST00000532149 HSPA9P38646 679 aaKnown RBP12.99□□□□□ -0.33
CHD7-211ENST00000532149 PSMC4P43686 418 aa12.99□□□□□ -0.33
CHD7-211ENST00000532149 PRMT2P55345 433 aa12.99□□□□□ -0.33
CHD7-211ENST00000532149 SLC8A3P57103 927 aa12.99□□□□□ -0.33
CHD7-211ENST00000532149 CBX1P83916 185 aa12.99□□□□□ -0.33
CHD7-211ENST00000532149 SLMAPQ14BN4 828 aa12.99□□□□□ -0.33
CHD7-211ENST00000532149 CCNG2Q16589 344 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms