RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ZMYM2Q9UBW7 1377 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 A0A1B0GVL5 298 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 TMEM238LA0A1B0GVL6 79 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 ABLIM1O14639 778 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 NRP1O14786 923 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 EREGO14944 169 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 NCK2O43639 380 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 B4GALT3O60512 393 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 KATNA1O75449 491 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 RECQL4O94761 1208 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 GCNT3O95395 438 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 PIGRP01833 764 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 THP07101 528 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 SLFN14P0C7P3 912 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 PFKFB1P16118 471 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 EPB42P16452 691 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 CES1P23141 567 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 ERVFC1P60507 584 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 ASIC1P78348 528 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 GTF2BQ00403 316 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 DSC1Q08554 894 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 GRIK3Q13003 919 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 NOLC1Q14978 699 aaKnown RBP eCLIP6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 KYAT1Q16773 422 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 FNDC3BQ53EP0 1204 aaKnown RBP6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 ZC2HC1CQ53FD0 456 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 HGSNATQ68CP4 663 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 EP400NLQ6ZTU2 488 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 Q6ZVU0 165 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 ZNF720Q7Z2F6 126 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 TMEM173Q86WV6 379 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 COLGALT2Q8IYK4 626 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 AHI1Q8N157 1196 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 UBR7Q8N806 425 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 CEP120Q8N960 986 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 GSTCDQ8NEC7 633 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 MYRIPQ8NFW9 859 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 HVCN1Q96D96 273 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 IGSF21Q96ID5 467 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 ZBTB45Q96K62 511 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 ACAP3Q96P50 834 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 FIZ1Q96SL8 496 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 C7orf25Q9BPX7 421 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 TCF25Q9BQ70 676 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 COLEC11Q9BWP8 271 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 SPATA9Q9BWV2 254 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 TRIM9Q9C026 710 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 EPN3Q9H201 632 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 TNKS2Q9H2K2 1166 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 NGRNQ9NPE2 291 aaKnown RBP6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 ENTPD7Q9NQZ7 604 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 OLFML3Q9NRN5 406 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 INTS7Q9NVH2 962 aaKnown RBP6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 MIOSQ9NXC5 875 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 ABI2Q9NYB9 513 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 TBC1D7Q9P0N9 293 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 TMEM63CQ9P1W3 806 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 THEGQ9P2T0 379 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 ZNF69Q9UC07 566 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 STK39Q9UEW8 545 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 USP25Q9UHP3 1055 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 COG5Q9UP83 839 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 EXOC7Q9UPT5 735 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 PRG3Q9Y2Y8 225 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 WASF2Q9Y6W5 498 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 LAMA2P24043 3122 aaKnown RBP6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 CDH23Q9H251 3354 aa6.28□□□□□ -1.4
HMGB1P42-201ENST00000532126 LOXHD1Q8IVV2 1947 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 SMIM28A0A1B0GU29 152 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 A0A1W2PQ27 194 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 A0A1W2PQ64 194 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 A0A1W2PQD8 194 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 FRMD3A2A2Y4 597 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 GOLGA6L4A6NEF3 574 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 PTGESO14684 152 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 FSCN2O14926 492 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 PLD2O14939 933 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 TADA2AO75478 443 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 RFPL1O75677 317 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 CLTAP09496 248 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 FAM153BP0C7A2 387 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 MYBP10242 640 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 CA8P35219 290 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 SYKP43405 635 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 AFMP43652 599 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 NRIP1P48552 1158 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 NDUFA8P51970 172 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 MRPS5P82675 430 aaKnown RBP6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 RELBQ01201 579 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 ITKQ08881 620 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 HYAL1Q12794 435 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 COASYQ13057 564 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 TUSC3Q13454 348 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 ALCAMQ13740 583 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 SMC1AQ14683 1233 aaKnown RBP6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 AAK1Q2M2I8 961 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 GLRA4Q5JXX5 417 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 PLPP4Q5VZY2 271 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 SLFN12LQ6IEE8 588 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 CCDC70Q6NSX1 233 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms