RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 SLC44A4Q53GD3 710 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 ARHGAP15Q53QZ3 475 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 FKBP15Q5T1M5 1219 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 RNF44Q7L0R7 432 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 FAM71BQ8TC56 605 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 STT3BQ8TCJ2 826 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 STYXQ8WUJ0 223 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 SPSB4Q96A44 273 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 TEPSINQ96N21 525 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 SORBS1Q9BX66 1292 aaKnown RBP3.55□□□□□ -1.84
CD44-234ENST00000531873 TLR10Q9BXR5 811 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 EIF2AQ9BY44 585 aaKnown RBP3.55□□□□□ -1.84
CD44-234ENST00000531873 MEGF9Q9H1U4 602 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 NECTIN3Q9NQS3 549 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 ITM2CQ9NQX7 267 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 TBC1D23Q9NUY8 699 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 ETAA1Q9NY74 926 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 RRN3Q9NYV6 651 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 VSX1Q9NZR4 365 aaPredicted RBP3.55□□□□□ -1.84
CD44-234ENST00000531873 LRFN1Q9P244 771 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 XPR1Q9UBH6 696 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 ZNF69Q9UC07 566 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 ITGB1BP2Q9UKP3 347 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 TMX2Q9Y320 296 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 IPO5O00410 1097 aaKnown RBP3.54□□□□□ -1.84
CD44-234ENST00000531873 DCLK1O15075 740 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 NCAM2O15394 837 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 KCNQ3O43525 872 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 B4GALT4O60513 344 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 CHEK2O96017 543 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 ITGB1P05556 798 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 ITGA5P08648 1049 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 DHRS4L1P0CG22 281 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 CKBP12277 381 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 FCER1AP12319 257 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 CR2P20023 1033 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 ACVR2AP27037 513 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 VIPR2P41587 438 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 SLURP1P55000 103 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 BOP1Q14137 746 aaKnown RBP3.54□□□□□ -1.84
CD44-234ENST00000531873 PTK2BQ14289 1009 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 NOMO2Q5JPE7 1267 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 ATXN7L2Q5T6C5 722 aaPredicted RBP3.54□□□□□ -1.84
CD44-234ENST00000531873 FCRL6Q6DN72 434 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 TANGO2Q6ICL3 276 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 FBXO38Q6PIJ6 1188 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 FAM111BQ6SJ93 734 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 KIAA0408Q6ZU52 694 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 KRT28Q7Z3Y7 464 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 SYT12Q8IV01 421 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 ZFPM1Q8IX07 1006 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 PDPRQ8NCN5 879 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 SLC17A8Q8NDX2 589 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 FAM46DQ8NEK8 389 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 IL17REQ8NFR9 667 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 OR52N2Q8NGI0 321 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 TFAP2CQ92754 450 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 DDX17Q92841 729 aaKnown RBP3.54□□□□□ -1.84
CD44-234ENST00000531873 NEU1Q99519 415 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 PLA2G12BQ9BX93 195 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 MS4A7Q9GZW8 240 aaPredicted RBP3.54□□□□□ -1.84
CD44-234ENST00000531873 MSL2Q9HCI7 577 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 TMEM8AQ9HCN3 771 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 RGL1Q9NZL6 768 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 HESX1Q9UBX0 185 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 ANAPC4Q9UJX5 808 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 GJD2Q9UKL4 321 aa3.54□□□□□ -1.84
CD44-234ENST00000531873 SCAF8Q9UPN6 1271 aaKnown RBP3.54□□□□□ -1.84
CD44-234ENST00000531873 CCDC78A2IDD5 438 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 H7C4K7 107 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 AKAP8O43823 692 aaKnown RBP3.53□□□□□ -1.84
CD44-234ENST00000531873 NOBOXO60393 691 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 CDC14BO60729 498 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 RASSF9O75901 435 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 EGR1P18146 543 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 BTF3P20290 206 aaKnown RBP3.53□□□□□ -1.84
CD44-234ENST00000531873 MAPK9P45984 424 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 COPAP53621 1224 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 WNT3P56703 355 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 PRKG1Q13976 671 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 TAF5Q15542 800 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 NPY5RQ15761 445 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 ZIK1Q3SY52 487 aaPredicted RBP3.53□□□□□ -1.84
CD44-234ENST00000531873 C1QL3Q5VWW1 255 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 FAM160B1Q5W0V3 765 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 METRNLQ641Q3 311 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 CCDC70Q6NSX1 233 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 CRTC1Q6UUV9 634 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 CYP26C1Q6V0L0 522 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 MMS22LQ6ZRQ5 1243 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 USP49Q70CQ1 688 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 GAS2L3Q86XJ1 694 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 YAF2Q8IY57 180 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 FITM2Q8N6M3 262 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 PAF1Q8N7H5 531 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 TBC1D15Q8TC07 691 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 RAPGEF4Q8WZA2 1011 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 UBXN10Q96LJ8 280 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 MESP1Q9BRJ9 268 aa3.53□□□□□ -1.84
CD44-234ENST00000531873 MAGEB5Q9BZ81 275 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms