RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 TREML2Q5T2D2 321 aa17.78■□□□□ 0.44
VPS26B-206ENST00000531741 CYB5D1Q6P9G0 228 aa17.78■□□□□ 0.44
VPS26B-206ENST00000531741 MPZL3Q6UWV2 235 aa17.78■□□□□ 0.44
VPS26B-206ENST00000531741 PLPPR4Q7Z2D5 763 aa17.78■□□□□ 0.44
VPS26B-206ENST00000531741 FNIP1Q8TF40 1166 aa17.78■□□□□ 0.44
VPS26B-206ENST00000531741 C9orf72Q96LT7 481 aa17.78■□□□□ 0.44
VPS26B-206ENST00000531741 MAGEB18Q96M61 343 aa17.78■□□□□ 0.44
VPS26B-206ENST00000531741 FHDC1Q9C0D6 1143 aaPredicted RBP17.78■□□□□ 0.44
VPS26B-206ENST00000531741 KCNK9Q9NPC2 374 aa17.78■□□□□ 0.44
VPS26B-206ENST00000531741 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.78■□□□□ 0.44
VPS26B-206ENST00000531741 SHOC2Q9UQ13 582 aa17.78■□□□□ 0.44
VPS26B-206ENST00000531741 ZBTB42B2RXF5 422 aa17.78■□□□□ 0.44
VPS26B-206ENST00000531741 SUN1O94901 812 aa17.78■□□□□ 0.44
VPS26B-206ENST00000531741 LRRC14Q15048 493 aa17.78■□□□□ 0.44
VPS26B-206ENST00000531741 ZNF699Q32M78 642 aa17.78■□□□□ 0.44
VPS26B-206ENST00000531741 TMEM63BQ5T3F8 832 aa17.78■□□□□ 0.44
VPS26B-206ENST00000531741 KAZNQ674X7 775 aa17.78■□□□□ 0.44
VPS26B-206ENST00000531741 RNF149Q8NC42 400 aa17.78■□□□□ 0.44
VPS26B-206ENST00000531741 TFAP2BQ92481 460 aa17.78■□□□□ 0.44
VPS26B-206ENST00000531741 PCDH9Q9HC56 1237 aa17.78■□□□□ 0.44
VPS26B-206ENST00000531741 KLHL11Q9NVR0 708 aa17.78■□□□□ 0.44
VPS26B-206ENST00000531741 NKIRAS1Q9NYS0 192 aa17.78■□□□□ 0.44
VPS26B-206ENST00000531741 PAPPA2Q9BXP8 1791 aa17.77■□□□□ 0.44
VPS26B-206ENST00000531741 ACKR2O00590 384 aa17.77■□□□□ 0.44
VPS26B-206ENST00000531741 ZBTB7AO95365 584 aa17.77■□□□□ 0.44
VPS26B-206ENST00000531741 POLR2BP30876 1174 aaKnown RBP17.77■□□□□ 0.44
VPS26B-206ENST00000531741 ARSEP51690 589 aa17.77■□□□□ 0.44
VPS26B-206ENST00000531741 MNAT1P51948 309 aa17.77■□□□□ 0.44
VPS26B-206ENST00000531741 GBP7Q8N8V2 638 aaPredicted RBP17.77■□□□□ 0.44
VPS26B-206ENST00000531741 GLIS1Q8NBF1 620 aa17.77■□□□□ 0.44
VPS26B-206ENST00000531741 SLC35B2Q8TB61 432 aa17.77■□□□□ 0.44
VPS26B-206ENST00000531741 GPR20Q99678 358 aa17.77■□□□□ 0.44
VPS26B-206ENST00000531741 FZD8Q9H461 694 aa17.77■□□□□ 0.44
VPS26B-206ENST00000531741 FGFR1OP2Q9NVK5 253 aa17.77■□□□□ 0.44
VPS26B-206ENST00000531741 HAUS2Q9NVX0 235 aa17.77■□□□□ 0.44
VPS26B-206ENST00000531741 C3orf70A6NLC5 250 aaPredicted RBP17.76■□□□□ 0.43
VPS26B-206ENST00000531741 SIGLEC16A6NMB1 481 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 CHUKO15111 745 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 TNNC2P02585 160 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 VGLL4Q14135 290 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 ZFYVE27Q5T4F4 411 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 RNASEH2BQ5TBB1 312 aaKnown RBP17.76■□□□□ 0.43
VPS26B-206ENST00000531741 MAGEC3Q8TD91 643 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 MGARPQ8TDB4 240 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 MPHOSPH6Q99547 160 aaKnown RBP17.76■□□□□ 0.43
VPS26B-206ENST00000531741 SAYSD1Q9NPB0 183 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 CD2APQ9Y5K6 639 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 ANK1P16157 1881 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 CFAP73A6NFT4 308 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 ALOX15BO15296 676 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 MED7O43513 233 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 SRGAP2CP0DJJ0 459 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 NF2P35240 595 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 SLC26A2P50443 739 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 GPS1Q13098 491 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 TAZQ16635 292 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 WDR72Q3MJ13 1102 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 TXNRD3NBQ6F5E7 133 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 PCGF5Q86SE9 256 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 PRUNE1Q86TP1 453 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 PARP9Q8IXQ6 854 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 SRRM1Q8IYB3 904 aaKnown RBP17.76■□□□□ 0.43
VPS26B-206ENST00000531741 ANKRD42Q8N9B4 389 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 GRAMD1AQ96CP6 724 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 ANKRD36BP1Q96IX9 119 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 BCO2Q9BYV7 579 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 SENP1Q9P0U3 644 aa17.76■□□□□ 0.43
VPS26B-206ENST00000531741 EXOC1LA0A1B0GW35 172 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 LRRD1A4D1F6 860 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 RASA4BC9J798 803 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 RASA4O43374 803 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 MGRN1O60291 552 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 IL18RAPO95256 599 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 KRT7P08729 469 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 WEE2P0C1S8 567 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 PECAM1P16284 738 aaPredicted RBP17.75■□□□□ 0.43
VPS26B-206ENST00000531741 GCAP28676 217 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 STX2P32856 288 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 GTF2A1P52655 376 aaPredicted RBP17.75■□□□□ 0.43
VPS26B-206ENST00000531741 TFAMQ00059 246 aaKnown RBP17.75■□□□□ 0.43
VPS26B-206ENST00000531741 SLC25A11Q02978 314 aaKnown RBP17.75■□□□□ 0.43
VPS26B-206ENST00000531741 TFDP1Q14186 410 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 LY6KQ17RY6 165 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 GALNTL6Q49A17 601 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 CELF3Q5SZQ8 465 aaKnown RBP17.75■□□□□ 0.43
VPS26B-206ENST00000531741 ATF7IP2Q5U623 682 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 NUGGCQ68CJ6 796 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 CYP4F22Q6NT55 531 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 TRABD2AQ86V40 505 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 NCAPG2Q86XI2 1143 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 TTC13Q8NBP0 860 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 WDR35Q9P2L0 1181 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 PRKAG3Q9UGI9 489 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 ARL2BPQ9Y2Y0 163 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 FAM47DPA6NHR8 397 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 IRF6O14896 467 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 PRPF4O43172 522 aaKnown RBP eCLIP17.75■□□□□ 0.43
VPS26B-206ENST00000531741 HIRAP54198 1017 aaPredicted RBP17.75■□□□□ 0.43
VPS26B-206ENST00000531741 PTPN20Q4JDL3 420 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 ZNF394Q53GI3 561 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms