RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ZSCAN32Q9NX65 697 aa18.13■□□□□ 0.49
CPSF1-207ENST00000531727 OBP2AQ9NY56 170 aa18.13■□□□□ 0.49
CPSF1-207ENST00000531727 ABI2Q9NYB9 513 aaPredicted RBP18.13■□□□□ 0.49
CPSF1-207ENST00000531727 AGAP1Q9UPQ3 857 aa18.13■□□□□ 0.49
CPSF1-207ENST00000531727 FAM186AA6NE01 2351 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 GOLGA8IPA6NC78 632 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 GOLGA8JA6NMD2 632 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 TULP1O00294 542 aaPredicted RBP18.12■□□□□ 0.49
CPSF1-207ENST00000531727 DPYSL4O14531 572 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 PRPF6O94906 941 aaKnown RBP18.12■□□□□ 0.49
CPSF1-207ENST00000531727 CCNE1P24864 410 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 WEE1P30291 646 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 CYP4F8P98187 520 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 TSPY1Q01534 308 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 PDCL2Q8N4E4 241 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 ZBTB44Q8NCP5 570 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 CXorf38Q8TB03 319 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 GIPC2Q8TF65 315 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 ATRIPQ8WXE1 791 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 RUBCNQ92622 972 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 GCNAQ96QF7 691 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 PCIF1Q9H4Z3 704 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 TASP1Q9H6P5 420 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 LMAN1LQ9HAT1 526 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 IL21Q9HBE4 155 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 ITGA11Q9UKX5 1188 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 L1RE1Q9UN81 338 aa18.12■□□□□ 0.49
CPSF1-207ENST00000531727 FRYLO94915 3013 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 KIAA0391O15091 583 aaKnown RBP18.11■□□□□ 0.49
CPSF1-207ENST00000531727 SPTLC2O15270 562 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 HUS1O60921 280 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 PPP6R2O75170 966 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 ID4P47928 161 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 E2F4Q16254 413 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 TAF12Q16514 161 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 ARHGAP29Q52LW3 1261 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 C1orf228Q6PIY5 440 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 TSSK4Q6SA08 328 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 MAMSTRQ6ZN01 415 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 STXBP4Q6ZWJ1 553 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 GPD1LQ8N335 351 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 NOC3LQ8WTT2 800 aaKnown RBP18.11■□□□□ 0.49
CPSF1-207ENST00000531727 ZNF396Q96N95 335 aaPredicted RBP18.11■□□□□ 0.49
CPSF1-207ENST00000531727 LRRC3BQ96PB8 259 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 HINFPQ9BQA5 517 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 LRRC27Q9C0I9 530 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 CUEDC2Q9H467 287 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 C8orf33Q9H7E9 229 aaPredicted RBP18.11■□□□□ 0.49
CPSF1-207ENST00000531727 PDE11AQ9HCR9 933 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 TMLHEQ9NVH6 421 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 KBTBD4Q9NVX7 518 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 PCDHB5Q9Y5E4 795 aa18.11■□□□□ 0.49
CPSF1-207ENST00000531727 RIF1Q5UIP0 2472 aaKnown RBP18.11■□□□□ 0.49
CPSF1-207ENST00000531727 LILRB5O75023 590 aa18.1■□□□□ 0.49
CPSF1-207ENST00000531727 PRAMEF12O95522 483 aa18.1■□□□□ 0.49
CPSF1-207ENST00000531727 TMEM191BP0C7N4 346 aa18.1■□□□□ 0.49
CPSF1-207ENST00000531727 CHRNB1P11230 501 aa18.1■□□□□ 0.49
CPSF1-207ENST00000531727 KPNA1P52294 538 aaPredicted RBP18.1■□□□□ 0.49
CPSF1-207ENST00000531727 BFSP1Q12934 665 aa18.1■□□□□ 0.49
CPSF1-207ENST00000531727 NFE2Q16621 373 aaPredicted RBP18.1■□□□□ 0.49
CPSF1-207ENST00000531727 TMEM86AQ8N2M4 240 aa18.1■□□□□ 0.49
CPSF1-207ENST00000531727 CSGALNACT2Q8N6G5 542 aa18.1■□□□□ 0.49
CPSF1-207ENST00000531727 GLIS3Q8NEA6 775 aa18.1■□□□□ 0.49
CPSF1-207ENST00000531727 LEO1Q8WVC0 666 aaPredicted RBP18.1■□□□□ 0.49
CPSF1-207ENST00000531727 ACBD6Q9BR61 282 aa18.1■□□□□ 0.49
CPSF1-207ENST00000531727 FAM126AQ9BYI3 521 aaPredicted RBP18.1■□□□□ 0.49
CPSF1-207ENST00000531727 MTMR12Q9C0I1 747 aa18.1■□□□□ 0.49
CPSF1-207ENST00000531727 GDAP2Q9NXN4 497 aa18.1■□□□□ 0.49
CPSF1-207ENST00000531727 TFIP11Q9UBB9 837 aaKnown RBP18.1■□□□□ 0.49
CPSF1-207ENST00000531727 ZMYM5Q9UJ78 669 aa18.1■□□□□ 0.49
CPSF1-207ENST00000531727 PTPRZ1P23471 2315 aaPredicted RBP18.1■□□□□ 0.49
CPSF1-207ENST00000531727 DENND4CQ5VZ89 1909 aa18.1■□□□□ 0.49
CPSF1-207ENST00000531727 KIF26AQ9ULI4 1882 aaPredicted RBP18.09■□□□□ 0.49
CPSF1-207ENST00000531727 SLC38A8A6NNN8 435 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 YEATS4O95619 227 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 KRT19P08727 400 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 HMGA1P17096 107 aaKnown RBP18.09■□□□□ 0.49
CPSF1-207ENST00000531727 SOX9P48436 509 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 RBP5P82980 135 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 FOXK2Q01167 660 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 MYL7Q01449 175 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 SCARA3Q6AZY7 606 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 KIAA2013Q8IYS2 634 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 SPATA18Q8TC71 538 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 BPIFB1Q8TDL5 484 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 HPS3Q969F9 1004 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 DHX58Q96C10 678 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 ZFYVE19Q96K21 471 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 FAM84AQ96KN4 292 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 PI4K2AQ9BTU6 479 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 TRIM9Q9C026 710 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 EPC1Q9H2F5 836 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 DDX43Q9NXZ2 648 aaKnown RBP18.09■□□□□ 0.49
CPSF1-207ENST00000531727 SIX4Q9UIU6 781 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 ZNF292O60281 2723 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 OBSL1O75147 1896 aa18.09■□□□□ 0.49
CPSF1-207ENST00000531727 MYBPHLA2RUH7 354 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 SPECC1L-ADORA2AF8WAN1 911 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 CUTAO60888 179 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 PRPF40AO75400 957 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms