RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-215	ENST00000531558	TDRD5	Q8NAT2	981 aa	Known RBP	27.65	■■■□□ 2.02
PICALM-215	ENST00000531558	MMRN2	Q9H8L6	949 aa		27.65	■■■□□ 2.02
PICALM-215	ENST00000531558	TMEM8A	Q9HCN3	771 aa		27.65	■■■□□ 2.02
PICALM-215	ENST00000531558	HSFX1	Q9UBD0	423 aa		27.65	■■■□□ 2.02
PICALM-215	ENST00000531558	NXF1	Q9UBU9	619 aa	Known RBP	27.65	■■■□□ 2.02
PICALM-215	ENST00000531558	STX10	O60499	249 aa		27.64	■■■□□ 2.02
PICALM-215	ENST00000531558	TACC1	O75410	805 aa		27.64	■■■□□ 2.02
PICALM-215	ENST00000531558	CLSTN1	O94985	981 aa		27.64	■■■□□ 2.02
PICALM-215	ENST00000531558	HLA-DRA	P01903	254 aa		27.64	■■■□□ 2.02
PICALM-215	ENST00000531558	FAM163B	P0C2L3	166 aa		27.64	■■■□□ 2.02
PICALM-215	ENST00000531558	STX17	P56962	302 aa		27.64	■■■□□ 2.02
PICALM-215	ENST00000531558	TWF1	Q12792	350 aa		27.64	■■■□□ 2.02
PICALM-215	ENST00000531558	SGSM1	Q2NKQ1	1148 aa		27.64	■■■□□ 2.02
PICALM-215	ENST00000531558	ZNF667	Q5HYK9	610 aa		27.64	■■■□□ 2.02
PICALM-215	ENST00000531558	OTOP3	Q7RTS5	596 aa		27.64	■■■□□ 2.02
PICALM-215	ENST00000531558	C2orf15	Q8WU43	125 aa	Known RBP	27.64	■■■□□ 2.02
PICALM-215	ENST00000531558	TAF4B	Q92750	862 aa		27.64	■■■□□ 2.02
PICALM-215	ENST00000531558	MRPL45	Q9BRJ2	306 aa	Known RBP	27.64	■■■□□ 2.02
PICALM-215	ENST00000531558	ARMCX3	Q9UH62	379 aa	Predicted RBP	27.64	■■■□□ 2.02
PICALM-215	ENST00000531558	HCRT	O43612	131 aa		27.63	■■■□□ 2.01
PICALM-215	ENST00000531558	ASS1	P00966	412 aa	Known RBP	27.63	■■■□□ 2.01
PICALM-215	ENST00000531558	NTHL1	P78549	312 aa		27.63	■■■□□ 2.01
PICALM-215	ENST00000531558	PLD1	Q13393	1074 aa		27.63	■■■□□ 2.01
PICALM-215	ENST00000531558	DCAF17	Q5H9S7	520 aa	Predicted RBP	27.63	■■■□□ 2.01
PICALM-215	ENST00000531558	FILIP1	Q7Z7B0	1213 aa		27.63	■■■□□ 2.01
PICALM-215	ENST00000531558	TTC9B	Q8N6N2	239 aa		27.63	■■■□□ 2.01
PICALM-215	ENST00000531558	MLKL	Q8NB16	471 aa		27.63	■■■□□ 2.01
PICALM-215	ENST00000531558	TAS1R2	Q8TE23	839 aa		27.63	■■■□□ 2.01
PICALM-215	ENST00000531558	PKMYT1	Q99640	499 aa		27.63	■■■□□ 2.01
PICALM-215	ENST00000531558	TMLHE	Q9NVH6	421 aa		27.63	■■■□□ 2.01
PICALM-215	ENST00000531558	HCFC1R1	Q9NWW0	138 aa		27.63	■■■□□ 2.01
PICALM-215	ENST00000531558	DNMT3B	Q9UBC3	853 aa	Known RBP	27.63	■■■□□ 2.01
PICALM-215	ENST00000531558	SLC27A5	Q9Y2P5	690 aa		27.63	■■■□□ 2.01
PICALM-215	ENST00000531558	MXI1	P50539	228 aa		27.62	■■■□□ 2.01
PICALM-215	ENST00000531558	NFE2	Q16621	373 aa	Predicted RBP	27.62	■■■□□ 2.01
PICALM-215	ENST00000531558	TCERG1L	Q5VWI1	586 aa		27.62	■■■□□ 2.01
PICALM-215	ENST00000531558	KRT39	Q6A163	491 aa		27.62	■■■□□ 2.01
PICALM-215	ENST00000531558	FRMD5	Q7Z6J6	570 aa		27.62	■■■□□ 2.01
PICALM-215	ENST00000531558	RNF135	Q8IUD6	432 aa		27.62	■■■□□ 2.01
PICALM-215	ENST00000531558	ELMOD1	Q8N336	334 aa		27.62	■■■□□ 2.01
PICALM-215	ENST00000531558	SPPL2B	Q8TCT7	592 aa		27.62	■■■□□ 2.01
PICALM-215	ENST00000531558	ELMO3	Q96BJ8	720 aa		27.62	■■■□□ 2.01
PICALM-215	ENST00000531558	ACSF2	Q96CM8	615 aa	Predicted RBP	27.62	■■■□□ 2.01
PICALM-215	ENST00000531558	SMYD3	Q9H7B4	428 aa		27.62	■■■□□ 2.01
PICALM-215	ENST00000531558	METTL14	Q9HCE5	456 aa	Known RBP	27.62	■■■□□ 2.01
PICALM-215	ENST00000531558	RWDD2A	Q9UIY3	292 aa		27.62	■■■□□ 2.01
PICALM-215	ENST00000531558	N4BP1	O75113	896 aa	Known RBP	27.61	■■■□□ 2.01
PICALM-215	ENST00000531558	MBD3	O95983	291 aa		27.61	■■■□□ 2.01
PICALM-215	ENST00000531558	P4HA1	P13674	534 aa		27.61	■■■□□ 2.01
PICALM-215	ENST00000531558	FSHR	P23945	695 aa		27.61	■■■□□ 2.01
PICALM-215	ENST00000531558	LMO2	P25791	158 aa		27.61	■■■□□ 2.01
PICALM-215	ENST00000531558	CDR1	P51861	262 aa		27.61	■■■□□ 2.01
PICALM-215	ENST00000531558	PABPC1L	Q4VXU2	614 aa	Known RBP	27.61	■■■□□ 2.01
PICALM-215	ENST00000531558	GET4	Q7L5D6	327 aa	Predicted RBP	27.61	■■■□□ 2.01
PICALM-215	ENST00000531558	ZDHHC14	Q8IZN3	488 aa		27.61	■■■□□ 2.01
PICALM-215	ENST00000531558	SYT15	Q9BQS2	421 aa		27.61	■■■□□ 2.01
PICALM-215	ENST00000531558	IMPG2	Q9BZV3	1241 aa		27.61	■■■□□ 2.01
PICALM-215	ENST00000531558	SNX25	Q9H3E2	840 aa		27.61	■■■□□ 2.01
PICALM-215	ENST00000531558	ABI2	Q9NYB9	513 aa	Predicted RBP	27.61	■■■□□ 2.01
PICALM-215	ENST00000531558	CEP72	Q9P209	647 aa		27.61	■■■□□ 2.01
PICALM-215	ENST00000531558	CDH9	Q9ULB4	789 aa		27.61	■■■□□ 2.01
PICALM-215	ENST00000531558	PCDHB5	Q9Y5E4	795 aa		27.61	■■■□□ 2.01
PICALM-215	ENST00000531558	GNL1	P36915	607 aa	Predicted RBP	27.6	■■■□□ 2.01
PICALM-215	ENST00000531558	ALDH1A3	P47895	512 aa		27.6	■■■□□ 2.01
PICALM-215	ENST00000531558	CCDC142	Q17RM4	750 aa		27.6	■■■□□ 2.01
PICALM-215	ENST00000531558	CCDC40	Q4G0X9	1142 aa		27.6	■■■□□ 2.01
PICALM-215	ENST00000531558	SPOPL	Q6IQ16	392 aa		27.6	■■■□□ 2.01
PICALM-215	ENST00000531558	SCARA5	Q6ZMJ2	495 aa		27.6	■■■□□ 2.01
PICALM-215	ENST00000531558	PLCD3	Q8N3E9	789 aa		27.6	■■■□□ 2.01
PICALM-215	ENST00000531558	OR6B3	Q8NGW1	331 aa		27.6	■■■□□ 2.01
PICALM-215	ENST00000531558	KHSRP	Q92945	711 aa	Known RBP eCLIP	27.6	■■■□□ 2.01	1e-7	■■■□□ 18.7
PICALM-215	ENST00000531558	SLC35C1	Q96A29	364 aa		27.6	■■■□□ 2.01
PICALM-215	ENST00000531558	SEPT5	Q99719	369 aa	Predicted RBP	27.6	■■■□□ 2.01
PICALM-215	ENST00000531558	GTF3C4	Q9UKN8	822 aa		27.6	■■■□□ 2.01
PICALM-215	ENST00000531558	NME7	Q9Y5B8	376 aa		27.6	■■■□□ 2.01
PICALM-215	ENST00000531558	SOAT2	O75908	522 aa		27.59	■■■□□ 2.01
PICALM-215	ENST00000531558	RHO	P08100	348 aa		27.59	■■■□□ 2.01
PICALM-215	ENST00000531558	PTPN2	P17706	415 aa		27.59	■■■□□ 2.01
PICALM-215	ENST00000531558	GBP2	P32456	591 aa	Predicted RBP	27.59	■■■□□ 2.01
PICALM-215	ENST00000531558	TUFM	P49411	452 aa	Known RBP	27.59	■■■□□ 2.01
PICALM-215	ENST00000531558	PSMC1	P62191	440 aa	Known RBP	27.59	■■■□□ 2.01
PICALM-215	ENST00000531558	MGAT5B	Q3V5L5	792 aa		27.59	■■■□□ 2.01
PICALM-215	ENST00000531558	IQCE	Q6IPM2	695 aa		27.59	■■■□□ 2.01
PICALM-215	ENST00000531558	FAM171B	Q6P995	826 aa		27.59	■■■□□ 2.01
PICALM-215	ENST00000531558	MYADM	Q96S97	322 aa		27.59	■■■□□ 2.01
PICALM-215	ENST00000531558	CORO1B	Q9BR76	489 aa		27.59	■■■□□ 2.01
PICALM-215	ENST00000531558	PI4K2A	Q9BTU6	479 aa		27.59	■■■□□ 2.01
PICALM-215	ENST00000531558	DNAJC25	Q9H1X3	360 aa		27.59	■■■□□ 2.01
PICALM-215	ENST00000531558	AVEN	Q9NQS1	362 aa	Predicted RBP	27.59	■■■□□ 2.01
PICALM-215	ENST00000531558	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	27.59	■■■□□ 2.01
PICALM-215	ENST00000531558	MYBPHL	A2RUH7	354 aa		27.58	■■■□□ 2.01
PICALM-215	ENST00000531558	ATP2C2	O75185	946 aa		27.58	■■■□□ 2.01
PICALM-215	ENST00000531558	PDGFRB	P09619	1106 aa		27.58	■■■□□ 2.01
PICALM-215	ENST00000531558	HAPLN1	P10915	354 aa	Predicted RBP	27.58	■■■□□ 2.01
PICALM-215	ENST00000531558	ASPA	P45381	313 aa		27.58	■■■□□ 2.01
PICALM-215	ENST00000531558	RAP1GAP	P47736	663 aa		27.58	■■■□□ 2.01
PICALM-215	ENST00000531558	EPHB3	P54753	998 aa		27.58	■■■□□ 2.01
PICALM-215	ENST00000531558	NLRP12	P59046	1061 aa		27.58	■■■□□ 2.01
PICALM-215	ENST00000531558	NOP14	P78316	857 aa	Known RBP	27.58	■■■□□ 2.01
PICALM-215	ENST00000531558	DPCR1	Q3MIW9	517 aa		27.58	■■■□□ 2.01

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