RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 HAPLN2Q9GZV7 340 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 DUSP15Q9H1R2 295 aaPredicted RBP10.01□□□□□ -0.81
NEDD8-206ENST00000531430 FOXP1Q9H334 677 aaPredicted RBP10.01□□□□□ -0.81
NEDD8-206ENST00000531430 ZHX3Q9H4I2 956 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 C17orf75Q9HAS0 396 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 TRPC7Q9HCX4 862 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 OBP2AQ9NY56 170 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 ABI2Q9NYB9 513 aaPredicted RBP10.01□□□□□ -0.81
NEDD8-206ENST00000531430 CCL26Q9Y258 94 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 PCDHB6Q9Y5E3 794 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 PCDHGA5Q9Y5G8 931 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 CEP295Q9C0D2 2601 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 ZFHX4Q86UP3 3567 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 KIF26AQ9ULI4 1882 aaPredicted RBP10□□□□□ -0.81
NEDD8-206ENST00000531430 CCDC163A0A0D9SF12 145 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 TTC26A0AVF1 554 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 OTOL1A6NHN0 477 aaPredicted RBP10□□□□□ -0.81
NEDD8-206ENST00000531430 CYB561D2O14569 222 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 TRDMT1O14717 391 aaKnown RBP10□□□□□ -0.81
NEDD8-206ENST00000531430 KHNYNO15037 678 aaKnown RBP10□□□□□ -0.81
NEDD8-206ENST00000531430 PRPF40AO75400 957 aaKnown RBP10□□□□□ -0.81
NEDD8-206ENST00000531430 TOP3BO95985 862 aaKnown RBP10□□□□□ -0.81
NEDD8-206ENST00000531430 TYMPP19971 482 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 CYP3A5P20815 502 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 DRD1P21728 446 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 ANAPC15P60006 121 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 SHC2P98077 582 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 ZNF252P-AS1Q0IIN9 211 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 MAPK7Q13164 816 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 ZBTB6Q15916 424 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 PLA2G2CQ5R387 149 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 SH3PXD2AQ5TCZ1 1133 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 SDHAF4Q5VUM1 108 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 NAIF1Q69YI7 327 aaPredicted RBP10□□□□□ -0.81
NEDD8-206ENST00000531430 JADE1Q6IE81 842 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 ZPBP2Q6X784 338 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 TMEM161BQ8NDZ6 487 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 STKLD1Q8NE28 680 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 OR10T2Q8NGX3 314 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 SPIRE2Q8WWL2 714 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 MRPS31Q92665 395 aaKnown RBP10□□□□□ -0.81
NEDD8-206ENST00000531430 EXOC4Q96A65 974 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 ZC3H10Q96K80 434 aaKnown RBP10□□□□□ -0.81
NEDD8-206ENST00000531430 P2RY13Q9BPV8 354 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 FAM83CQ9BQN1 747 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 MSTO1Q9BUK6 570 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 IL21Q9HBE4 155 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 HPS4Q9NQG7 708 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 TDP1Q9NUW8 608 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 SPAG17Q6Q759 2223 aa10□□□□□ -0.81
NEDD8-206ENST00000531430 ATRXP46100 2492 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 HNRNPDLO14979 420 aaKnown RBP9.99□□□□□ -0.81
NEDD8-206ENST00000531430 MAP3K13O43283 966 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 APBB3O95704 486 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 KRT18P05783 430 aaKnown RBP9.99□□□□□ -0.81
NEDD8-206ENST00000531430 PLA2G4BP0C869 781 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 HAPLN1P10915 354 aaPredicted RBP9.99□□□□□ -0.81
NEDD8-206ENST00000531430 HOXB3P14651 431 aaPredicted RBP9.99□□□□□ -0.81
NEDD8-206ENST00000531430 ATF6P18850 670 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 DHPSP49366 369 aaPredicted RBP9.99□□□□□ -0.81
NEDD8-206ENST00000531430 SEC13P55735 322 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 DMC1Q14565 340 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 TMEM132DQ14C87 1099 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 ENOX2Q16206 610 aaKnown RBP9.99□□□□□ -0.81
NEDD8-206ENST00000531430 IL17AQ16552 155 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 USP39Q53GS9 565 aaKnown RBP9.99□□□□□ -0.81
NEDD8-206ENST00000531430 SPATA1Q5VX52 437 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 C9orf57Q5W0N0 161 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 MCTP1Q6DN14 999 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 KIAA1211LQ6NV74 962 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 LRRTM3Q86VH5 581 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 MYCT1Q8N699 235 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 PIGKQ92643 395 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 USP13Q92995 863 aaPredicted RBP9.99□□□□□ -0.81
NEDD8-206ENST00000531430 CYP2S1Q96SQ9 504 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 PI4K2AQ9BTU6 479 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 TIPINQ9BVW5 301 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 TPSD1Q9BZJ3 242 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 ZCWPW1Q9H0M4 648 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 DUS2Q9NX74 493 aaKnown RBP9.99□□□□□ -0.81
NEDD8-206ENST00000531430 LARSQ9P2J5 1176 aaKnown RBP9.99□□□□□ -0.81
NEDD8-206ENST00000531430 GREB1Q4ZG55 1949 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 COL4A2P08572 1712 aa9.99□□□□□ -0.81
NEDD8-206ENST00000531430 ZNF638Q14966 1978 aaKnown RBP9.98□□□□□ -0.81
NEDD8-206ENST00000531430 BCLAF3A2AJT9 711 aaKnown RBP9.98□□□□□ -0.81
NEDD8-206ENST00000531430 H0YCG3 227 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 OGTO15294 1046 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 AKAP3O75969 853 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 FAM13AO94988 1023 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 NFICP08651 508 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 GUCY2CP25092 1073 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 GJA4P35212 333 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 MAPK8P45983 427 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 IFNAR2P48551 515 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 TRAPPC10P48553 1259 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 AARSP49588 968 aaKnown RBP eCLIP9.98□□□□□ -0.81
NEDD8-206ENST00000531430 GPR15P49685 360 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 ACOT2P49753 483 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 TOB1P50616 345 aaPredicted RBP9.98□□□□□ -0.81
NEDD8-206ENST00000531430 NLRP12P59046 1061 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms