RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 VARS2Q5ST30 1063 aaKnown RBP20.29■□□□□ 0.84
SMPD1-205ENST00000531303 HGSNATQ68CP4 663 aa20.29■□□□□ 0.84
SMPD1-205ENST00000531303 NOP9Q86U38 636 aaKnown RBP20.29■□□□□ 0.84
SMPD1-205ENST00000531303 UNC93AQ86WB7 457 aa20.29■□□□□ 0.84
SMPD1-205ENST00000531303 FMNL3Q8IVF7 1028 aa20.29■□□□□ 0.84
SMPD1-205ENST00000531303 TDHQ8IZJ6 230 aa20.29■□□□□ 0.84
SMPD1-205ENST00000531303 THEM5Q8N1Q8 247 aa20.29■□□□□ 0.84
SMPD1-205ENST00000531303 KLHL23Q8NBE8 558 aa20.29■□□□□ 0.84
SMPD1-205ENST00000531303 RTP3Q9BQQ7 232 aa20.29■□□□□ 0.84
SMPD1-205ENST00000531303 ARHGAP20Q9P2F6 1191 aa20.29■□□□□ 0.84
SMPD1-205ENST00000531303 FAM163BP0C2L3 166 aa20.28■□□□□ 0.84
SMPD1-205ENST00000531303 BMPR1AP36894 532 aa20.28■□□□□ 0.84
SMPD1-205ENST00000531303 PDE6CP51160 858 aa20.28■□□□□ 0.84
SMPD1-205ENST00000531303 KRT17Q04695 432 aa20.28■□□□□ 0.84
SMPD1-205ENST00000531303 RTP2Q5QGT7 225 aa20.28■□□□□ 0.84
SMPD1-205ENST00000531303 KIAA1841Q6NSI8 718 aa20.28■□□□□ 0.84
SMPD1-205ENST00000531303 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.28■□□□□ 0.84
SMPD1-205ENST00000531303 ZNF571Q7Z3V5 609 aaPredicted RBP20.28■□□□□ 0.84
SMPD1-205ENST00000531303 C12orf29Q8N999 325 aa20.28■□□□□ 0.84
SMPD1-205ENST00000531303 TFAP2BQ92481 460 aa20.28■□□□□ 0.84
SMPD1-205ENST00000531303 TTPALQ9BTX7 342 aa20.28■□□□□ 0.84
SMPD1-205ENST00000531303 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.28■□□□□ 0.84
SMPD1-205ENST00000531303 FAM124BQ9H5Z6 455 aaPredicted RBP20.28■□□□□ 0.84
SMPD1-205ENST00000531303 SEPT11Q9NVA2 429 aaKnown RBP20.28■□□□□ 0.84
SMPD1-205ENST00000531303 CARNS1A5YM72 827 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 SOWAHDA6NJG2 315 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 C2CD2LO14523 706 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 CSPG5O95196 566 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 PAEPP09466 180 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 PRKCIP41743 596 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 CCDC142Q17RM4 750 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 USP41Q3LFD5 358 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 CTXN3Q4LDR2 81 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 KIAA0319Q5VV43 1072 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 PRSS55Q6UWB4 352 aaPredicted RBP20.27■□□□□ 0.84
SMPD1-205ENST00000531303 CYP26C1Q6V0L0 522 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 DDX53Q86TM3 631 aaKnown RBP20.27■□□□□ 0.84
SMPD1-205ENST00000531303 TMEM139Q8IV31 216 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 EPS8L1Q8TE68 723 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 RIN2Q8WYP3 895 aaPredicted RBP20.27■□□□□ 0.84
SMPD1-205ENST00000531303 TMEM209Q96SK2 561 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 SYT15Q9BQS2 421 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 PBX4Q9BYU1 374 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 NKX2-4Q9H2Z4 354 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 KCNF1Q9H3M0 494 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 DEF6Q9H4E7 631 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 NHEJ1Q9H9Q4 299 aaPredicted RBP20.27■□□□□ 0.84
SMPD1-205ENST00000531303 FAM49BQ9NUQ9 324 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 MSRAQ9UJ68 235 aa20.27■□□□□ 0.84
SMPD1-205ENST00000531303 BZW2Q9Y6E2 419 aaKnown RBP20.27■□□□□ 0.84
SMPD1-205ENST00000531303 PLXNA4Q9HCM2 1894 aa20.27■□□□□ 0.83
SMPD1-205ENST00000531303 MMEP08473 750 aa20.26■□□□□ 0.83
SMPD1-205ENST00000531303 PTPN1P18031 435 aaKnown RBP20.26■□□□□ 0.83
SMPD1-205ENST00000531303 TNFAIP3P21580 790 aa20.26■□□□□ 0.83
SMPD1-205ENST00000531303 DNAJB2P25686 324 aa20.26■□□□□ 0.83
SMPD1-205ENST00000531303 PCSK1P29120 753 aa20.26■□□□□ 0.83
SMPD1-205ENST00000531303 TMTC1Q8IUR5 882 aa20.26■□□□□ 0.83
SMPD1-205ENST00000531303 VPS52Q8N1B4 723 aa20.26■□□□□ 0.83
SMPD1-205ENST00000531303 OR10T2Q8NGX3 314 aa20.26■□□□□ 0.83
SMPD1-205ENST00000531303 ZNF606Q8WXB4 792 aa20.26■□□□□ 0.83
SMPD1-205ENST00000531303 TNIP3Q96KP6 325 aa20.26■□□□□ 0.83
SMPD1-205ENST00000531303 AGPAT1Q99943 283 aa20.26■□□□□ 0.83
SMPD1-205ENST00000531303 ZSWIM1Q9BR11 485 aa20.26■□□□□ 0.83
SMPD1-205ENST00000531303 DNAI2Q9GZS0 605 aa20.26■□□□□ 0.83
SMPD1-205ENST00000531303 PDCL3Q9H2J4 239 aa20.26■□□□□ 0.83
SMPD1-205ENST00000531303 CERS4Q9HA82 394 aa20.26■□□□□ 0.83
SMPD1-205ENST00000531303 ALG13Q9NP73 1137 aaKnown RBP20.26■□□□□ 0.83
SMPD1-205ENST00000531303 NOCTQ9UK39 431 aaKnown RBP20.26■□□□□ 0.83
SMPD1-205ENST00000531303 MYH10P35580 1976 aa20.26■□□□□ 0.83
SMPD1-205ENST00000531303 OAZ2O95190 189 aa20.25■□□□□ 0.83
SMPD1-205ENST00000531303 EFEMP2O95967 443 aa20.25■□□□□ 0.83
SMPD1-205ENST00000531303 SOD2P04179 222 aa20.25■□□□□ 0.83
SMPD1-205ENST00000531303 CFHP08603 1231 aa20.25■□□□□ 0.83
SMPD1-205ENST00000531303 VDRP11473 427 aa20.25■□□□□ 0.83
SMPD1-205ENST00000531303 CHRNB2P17787 502 aa20.25■□□□□ 0.83
SMPD1-205ENST00000531303 CA8P35219 290 aa20.25■□□□□ 0.83
SMPD1-205ENST00000531303 ARPP19P56211 112 aa20.25■□□□□ 0.83
SMPD1-205ENST00000531303 CCZ1BP86790 482 aa20.25■□□□□ 0.83
SMPD1-205ENST00000531303 CCZ1P86791 482 aaPredicted RBP20.25■□□□□ 0.83
SMPD1-205ENST00000531303 CDK17Q00537 523 aa20.25■□□□□ 0.83
SMPD1-205ENST00000531303 MTF1Q14872 753 aa20.25■□□□□ 0.83
SMPD1-205ENST00000531303 SGO2Q562F6 1265 aa20.25■□□□□ 0.83
SMPD1-205ENST00000531303 MDH1BQ5I0G3 518 aa20.25■□□□□ 0.83
SMPD1-205ENST00000531303 CRYBG2Q8N1P7 616 aa20.25■□□□□ 0.83
SMPD1-205ENST00000531303 B3GALNT2Q8NCR0 500 aa20.25■□□□□ 0.83
SMPD1-205ENST00000531303 CCDC112Q8NEF3 446 aa20.25■□□□□ 0.83
SMPD1-205ENST00000531303 SPATA18Q8TC71 538 aa20.25■□□□□ 0.83
SMPD1-205ENST00000531303 CCDC42Q96M95 316 aa20.25■□□□□ 0.83
SMPD1-205ENST00000531303 CDH9Q9ULB4 789 aa20.25■□□□□ 0.83
SMPD1-205ENST00000531303 RWDD3Q9Y3V2 267 aa20.25■□□□□ 0.83
SMPD1-205ENST00000531303 LAMA2P24043 3122 aaKnown RBP20.25■□□□□ 0.83
SMPD1-205ENST00000531303 MYBPHLA2RUH7 354 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 NRDCO43847 1150 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 AKR1B10O60218 316 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 OR4Q2P0C623 313 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 CCDC130P13994 396 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 FECHP22830 423 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 TAP1Q03518 808 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 RAB30Q15771 203 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 ZNF280DQ6N043 979 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms