RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 HPS4Q9NQG7 708 aa9.99□□□□□ -0.81
CHMP4A-205ENST00000531158 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.99□□□□□ -0.81
CHMP4A-205ENST00000531158 DNM3Q9UQ16 869 aa9.99□□□□□ -0.81
CHMP4A-205ENST00000531158 CCL26Q9Y258 94 aa9.99□□□□□ -0.81
CHMP4A-205ENST00000531158 DSPP15924 2871 aaKnown RBP9.99□□□□□ -0.81
CHMP4A-205ENST00000531158 MYO18AQ92614 2054 aaKnown RBP9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 ITPR1Q14643 2758 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 GON4LQ3T8J9 2241 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 CACNA1EQ15878 2313 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 OR6C75A6NL08 312 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 CLDN3O15551 220 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 CLTAP09496 248 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 CYP3A5P20815 502 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 WEE1P30291 646 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 NMT1P30419 496 aaKnown RBP9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 LIMK1P53667 647 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 EPHB3P54753 998 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 LILRA4P59901 499 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 ARHGAP29Q52LW3 1261 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 SOWAHCQ53LP3 525 aaPredicted RBP9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 DGKKQ5KSL6 1271 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 PLA2G2CQ5R387 149 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 HYIQ5T013 277 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 TRIM68Q6AZZ1 485 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 KBTBD6Q86V97 674 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 LRRTM3Q86VH5 581 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 YAF2Q8IY57 180 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 SYT2Q8N9I0 419 aaPredicted RBP9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 STKLD1Q8NE28 680 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 EZH1Q92800 747 aaPredicted RBP9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 KCNN1Q92952 543 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 FIZ1Q96SL8 496 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 PLIN2Q99541 437 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 FAM83CQ9BQN1 747 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 LLPHQ9BRT6 129 aaKnown RBP9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 SLC46A2Q9BY10 475 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 ARRDC1-AS1Q9H2J1 176 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 ATXN3LQ9H3M9 355 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 PLEKHA5Q9HAU0 1116 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 OBP2AQ9NY56 170 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 UBQLN1Q9UMX0 589 aaKnown RBP9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 DMXL2Q8TDJ6 3036 aa9.98□□□□□ -0.81
CHMP4A-205ENST00000531158 CYSRT1A8MQ03 144 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 TISP43B9A030 160 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 PIRO00625 290 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 AXIN1O15169 862 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 FOXD2O60548 495 aaPredicted RBP9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 EPN2O95208 641 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 KCNK5O95279 499 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 NFICP08651 508 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 TYMPP19971 482 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 SPINK2P20155 84 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 MARCKSP29966 332 aaPredicted RBP9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 PRPHP41219 470 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 ALDH1A3P47895 512 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 PPP2R3AQ06190 1150 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 STRN3Q13033 797 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 PLD1Q13393 1074 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 MYBPC2Q14324 1141 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 AASDHQ4L235 1098 aaPredicted RBP9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 TMEM196Q5HYL7 178 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 SPATA1Q5VX52 437 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 C9orf57Q5W0N0 161 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 KRT79Q5XKE5 535 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 SCARA3Q6AZY7 606 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 JADE1Q6IE81 842 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 TCEAL6Q6IPX3 200 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 C1orf228Q6PIY5 440 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 DSTYKQ6XUX3 929 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 HAUS6Q7Z4H7 955 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 BPIFB1Q8TDL5 484 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 GAB3Q8WWW8 586 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 ZCCHC14Q8WYQ9 949 aaKnown RBP9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 TCEAL3Q969E4 200 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 SENP8Q96LD8 212 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 IKZF4Q9H2S9 585 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 CPSF3Q9UKF6 684 aaKnown RBP9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 LIMCH1Q9UPQ0 1083 aa9.97□□□□□ -0.81
CHMP4A-205ENST00000531158 LAMA5O15230 3695 aa9.96□□□□□ -0.81
CHMP4A-205ENST00000531158 SMG1Q96Q15 3661 aaKnown RBP9.96□□□□□ -0.81
CHMP4A-205ENST00000531158 A0A0B4J269 797 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 ANO9A1A5B4 782 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 ANTXRLA6NF34 631 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 PCNX2A6NKB5 2137 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 TADA3O75528 432 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 RPP40O75818 363 aaKnown RBP9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 PIGRP01833 764 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 CYP11A1P05108 521 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 ZNF806P0C7X5 589 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 HMGA1P17096 107 aaKnown RBP9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 GPR15P49685 360 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 WNT7BP56706 349 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 ATP2C1P98194 919 aaPredicted RBP9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 FOXC1Q12948 553 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 CUL4AQ13619 759 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 ZRSR1Q15695 479 aaKnown RBP9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 KLHL40Q2TBA0 621 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 ITPRIPL2Q3MIP1 535 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 TMEM119Q4V9L6 283 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 SLC39A12Q504Y0 691 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms