RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 CD58P19256 250 aa18.07■□□□□ 0.48
SF3B2-211ENST00000531041 LMO2P25791 158 aa18.07■□□□□ 0.48
SF3B2-211ENST00000531041 CA8P35219 290 aa18.07■□□□□ 0.48
SF3B2-211ENST00000531041 NDUFV1P49821 464 aa18.07■□□□□ 0.48
SF3B2-211ENST00000531041 ADGRE1Q14246 886 aa18.07■□□□□ 0.48
SF3B2-211ENST00000531041 Q7L0L9 218 aa18.07■□□□□ 0.48
SF3B2-211ENST00000531041 DEFB123Q8N688 67 aa18.07■□□□□ 0.48
SF3B2-211ENST00000531041 NEK11Q8NG66 645 aa18.07■□□□□ 0.48
SF3B2-211ENST00000531041 OR10T2Q8NGX3 314 aa18.07■□□□□ 0.48
SF3B2-211ENST00000531041 KLHL5Q96PQ7 755 aa18.07■□□□□ 0.48
SF3B2-211ENST00000531041 GAS2L1Q99501 681 aaPredicted RBP18.07■□□□□ 0.48
SF3B2-211ENST00000531041 NAA15Q9BXJ9 866 aaKnown RBP18.07■□□□□ 0.48
SF3B2-211ENST00000531041 DNAJC12Q9UKB3 198 aa18.07■□□□□ 0.48
SF3B2-211ENST00000531041 CDH9Q9ULB4 789 aa18.07■□□□□ 0.48
SF3B2-211ENST00000531041 MTCH2Q9Y6C9 303 aa18.07■□□□□ 0.48
SF3B2-211ENST00000531041 CDY1Q9Y6F8 540 aa18.07■□□□□ 0.48
SF3B2-211ENST00000531041 A8MXQ7 604 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 ADAM12O43184 909 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 ADH1AP07327 375 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 PDGFRBP09619 1106 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 ACO1P21399 889 aaKnown RBP18.06■□□□□ 0.48
SF3B2-211ENST00000531041 OR1D2P34982 312 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 NDST1P52848 882 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 RAB33AQ14088 237 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 IQCEQ6IPM2 695 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 WHAMMQ8TF30 809 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 PPP2R3CQ969Q6 453 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 TRIM5Q9C035 493 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 ZCWPW1Q9H0M4 648 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 AJAP1Q9UKB5 411 aaPredicted RBP18.06■□□□□ 0.48
SF3B2-211ENST00000531041 CNTN6Q9UQ52 1028 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 FHOD1Q9Y613 1164 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 EPHB6O15197 1021 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 HCRTO43612 131 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 C1RP00736 705 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 ACAT1P24752 427 aaKnown RBP18.06■□□□□ 0.48
SF3B2-211ENST00000531041 TSPY1Q01534 308 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 PTPN21Q16825 1174 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 ARHGAP44Q17R89 818 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 INTS6LQ5JSJ4 861 aaKnown RBP18.06■□□□□ 0.48
SF3B2-211ENST00000531041 ADGRD2Q7Z7M1 963 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 CRYBG2Q8N1P7 616 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 SHC3Q92529 594 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 TNIP3Q96KP6 325 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 TMEM209Q96SK2 561 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 SYT15Q9BQS2 421 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 NT5C1AQ9BXI3 368 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 NSUN3Q9H649 340 aaKnown RBP18.06■□□□□ 0.48
SF3B2-211ENST00000531041 HMGXB4Q9UGU5 601 aa18.06■□□□□ 0.48
SF3B2-211ENST00000531041 ATP2C2O75185 946 aa18.05■□□□□ 0.48
SF3B2-211ENST00000531041 TRIM21P19474 475 aaKnown RBP18.05■□□□□ 0.48
SF3B2-211ENST00000531041 KLRC2P26717 231 aa18.05■□□□□ 0.48
SF3B2-211ENST00000531041 RAD23BP54727 409 aa18.05■□□□□ 0.48
SF3B2-211ENST00000531041 POLR2FP61218 127 aaKnown RBP18.05■□□□□ 0.48
SF3B2-211ENST00000531041 ROR1Q01973 937 aa18.05■□□□□ 0.48
SF3B2-211ENST00000531041 GPR17Q13304 367 aa18.05■□□□□ 0.48
SF3B2-211ENST00000531041 FIGNQ5HY92 759 aa18.05■□□□□ 0.48
SF3B2-211ENST00000531041 FAM171BQ6P995 826 aa18.05■□□□□ 0.48
SF3B2-211ENST00000531041 PPFIBP1Q86W92 1011 aa18.05■□□□□ 0.48
SF3B2-211ENST00000531041 GLYCTKQ8IVS8 523 aa18.05■□□□□ 0.48
SF3B2-211ENST00000531041 DCP1BQ8IZD4 617 aaKnown RBP18.05■□□□□ 0.48
SF3B2-211ENST00000531041 B3GALNT2Q8NCR0 500 aa18.05■□□□□ 0.48
SF3B2-211ENST00000531041 ZNF461Q8TAF7 563 aa18.05■□□□□ 0.48
SF3B2-211ENST00000531041 TWNKQ96RR1 684 aa18.05■□□□□ 0.48
SF3B2-211ENST00000531041 CDCA3Q99618 268 aaPredicted RBP18.05■□□□□ 0.48
SF3B2-211ENST00000531041 CDX2Q99626 313 aaPredicted RBP18.05■□□□□ 0.48
SF3B2-211ENST00000531041 PKMYT1Q99640 499 aa18.05■□□□□ 0.48
SF3B2-211ENST00000531041 STK33Q9BYT3 514 aa18.05■□□□□ 0.48
SF3B2-211ENST00000531041 DNAI2Q9GZS0 605 aa18.05■□□□□ 0.48
SF3B2-211ENST00000531041 DPEP3Q9H4B8 488 aa18.05■□□□□ 0.48
SF3B2-211ENST00000531041 TLE6Q9H808 572 aa18.05■□□□□ 0.48
SF3B2-211ENST00000531041 MTMR10Q9NXD2 777 aa18.05■□□□□ 0.48
SF3B2-211ENST00000531041 PCDHB4Q9Y5E5 795 aa18.05■□□□□ 0.48
SF3B2-211ENST00000531041 REV3LO60673 3130 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 GREB1Q4ZG55 1949 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 WDR27A2RRH5 827 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 CLASP2O75122 1294 aaKnown RBP18.04■□□□□ 0.48
SF3B2-211ENST00000531041 ABLIM3O94929 683 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 CPB1P15086 417 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 PTPN1P18031 435 aaKnown RBP18.04■□□□□ 0.48
SF3B2-211ENST00000531041 IGFBP4P22692 258 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 SMARCB1Q12824 385 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 DRAP1Q14919 205 aaPredicted RBP18.04■□□□□ 0.48
SF3B2-211ENST00000531041 MAPRE1Q15691 268 aaKnown RBP18.04■□□□□ 0.48
SF3B2-211ENST00000531041 DUSP6Q16828 381 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 TPGS2Q68CL5 300 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 LILRA6Q6PI73 481 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 TMEM270Q6UE05 265 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 ACOT1Q86TX2 421 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 LRRTM3Q86VH5 581 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 SLC4A11Q8NBS3 891 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 IQCDQ96DY2 449 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 TMEM176AQ96HP8 235 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 GUCD1Q96NT3 240 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 NUP58Q9BVL2 599 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 ELOVL4Q9GZR5 314 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 CRTAC1Q9NQ79 661 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 CEP72Q9P209 647 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 GTF3C4Q9UKN8 822 aa18.04■□□□□ 0.48
SF3B2-211ENST00000531041 ITIH6Q6UXX5 1313 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms