RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 ANKRD20A12PQ8NF67 263 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 NT5C1BQ96P26 610 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 ACBD6Q9BR61 282 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 HMGXB4Q9UGU5 601 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 FBXW11Q9UKB1 542 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 COL6A3P12111 3177 aa22.79■■□□□ 1.24
CAPN1-220ENST00000530567 FSD2A1L4K1 749 aa22.79■■□□□ 1.24
CAPN1-220ENST00000530567 TBX10O75333 385 aa22.79■■□□□ 1.24
CAPN1-220ENST00000530567 GNL1P36915 607 aaPredicted RBP22.79■■□□□ 1.24
CAPN1-220ENST00000530567 LTBRP36941 435 aa22.79■■□□□ 1.24
CAPN1-220ENST00000530567 APBA1Q02410 837 aa22.79■■□□□ 1.24
CAPN1-220ENST00000530567 KCNMA1Q12791 1236 aa22.79■■□□□ 1.24
CAPN1-220ENST00000530567 INTS6LQ5JSJ4 861 aaKnown RBP22.79■■□□□ 1.24
CAPN1-220ENST00000530567 PHLDB3Q6NSJ2 640 aa22.79■■□□□ 1.24
CAPN1-220ENST00000530567 OR6B3Q8NGW1 331 aa22.79■■□□□ 1.24
CAPN1-220ENST00000530567 ZNF461Q8TAF7 563 aa22.79■■□□□ 1.24
CAPN1-220ENST00000530567 KAT5Q92993 513 aa22.79■■□□□ 1.24
CAPN1-220ENST00000530567 PABPC5Q96DU9 382 aaKnown RBP22.79■■□□□ 1.24
CAPN1-220ENST00000530567 SNX25Q9H3E2 840 aa22.79■■□□□ 1.24
CAPN1-220ENST00000530567 SIX2Q9NPC8 291 aa22.79■■□□□ 1.24
CAPN1-220ENST00000530567 TMLHEQ9NVH6 421 aa22.79■■□□□ 1.24
CAPN1-220ENST00000530567 MTCL1Q9Y4B5 1905 aaKnown RBP22.79■■□□□ 1.24
CAPN1-220ENST00000530567 PES1O00541 588 aaKnown RBP22.78■■□□□ 1.24
CAPN1-220ENST00000530567 NCK2O43639 380 aa22.78■■□□□ 1.24
CAPN1-220ENST00000530567 ATP2C2O75185 946 aa22.78■■□□□ 1.24
CAPN1-220ENST00000530567 PDGFRBP09619 1106 aa22.78■■□□□ 1.24
CAPN1-220ENST00000530567 SPATA31D3P0C874 917 aa22.78■■□□□ 1.24
CAPN1-220ENST00000530567 CPB1P15086 417 aa22.78■■□□□ 1.24
CAPN1-220ENST00000530567 PCSK1P29120 753 aa22.78■■□□□ 1.24
CAPN1-220ENST00000530567 DLX2Q07687 328 aaPredicted RBP22.78■■□□□ 1.24
CAPN1-220ENST00000530567 GPR17Q13304 367 aa22.78■■□□□ 1.24
CAPN1-220ENST00000530567 RNF19BQ6ZMZ0 732 aa22.78■■□□□ 1.24
CAPN1-220ENST00000530567 SPATA31D4Q6ZUB0 917 aa22.78■■□□□ 1.24
CAPN1-220ENST00000530567 UBR7Q8N806 425 aa22.78■■□□□ 1.24
CAPN1-220ENST00000530567 RNF214Q8ND24 703 aa22.78■■□□□ 1.24
CAPN1-220ENST00000530567 WHAMMQ8TF30 809 aa22.78■■□□□ 1.24
CAPN1-220ENST00000530567 SYT15Q9BQS2 421 aa22.78■■□□□ 1.24
CAPN1-220ENST00000530567 DPEP3Q9H4B8 488 aa22.78■■□□□ 1.24
CAPN1-220ENST00000530567 CRTAC1Q9NQ79 661 aa22.78■■□□□ 1.24
CAPN1-220ENST00000530567 CDH9Q9ULB4 789 aa22.78■■□□□ 1.24
CAPN1-220ENST00000530567 BARX2Q9UMQ3 279 aaPredicted RBP22.78■■□□□ 1.24
CAPN1-220ENST00000530567 NDST1P52848 882 aa22.77■■□□□ 1.24
CAPN1-220ENST00000530567 PSMC1P62191 440 aaKnown RBP22.77■■□□□ 1.24
CAPN1-220ENST00000530567 TPGS2Q68CL5 300 aa22.77■■□□□ 1.24
CAPN1-220ENST00000530567 KREMEN1Q96MU8 473 aa22.77■■□□□ 1.24
CAPN1-220ENST00000530567 TWNKQ96RR1 684 aa22.77■■□□□ 1.24
CAPN1-220ENST00000530567 MAN1C1Q9NR34 630 aa22.77■■□□□ 1.24
CAPN1-220ENST00000530567 CLDND1Q9NY35 253 aa22.77■■□□□ 1.24
CAPN1-220ENST00000530567 CLEC1BQ9P126 229 aa22.77■■□□□ 1.24
CAPN1-220ENST00000530567 AFF4Q9UHB7 1163 aaKnown RBP22.77■■□□□ 1.24
CAPN1-220ENST00000530567 MYBPHLA2RUH7 354 aa22.76■■□□□ 1.23
CAPN1-220ENST00000530567 MTMR11A4FU01 709 aa22.76■■□□□ 1.23
CAPN1-220ENST00000530567 A8MXQ7 604 aa22.76■■□□□ 1.23
CAPN1-220ENST00000530567 GOLGA6L19H0YKK7 550 aa22.76■■□□□ 1.23
CAPN1-220ENST00000530567 CILPO75339 1184 aa22.76■■□□□ 1.23
CAPN1-220ENST00000530567 TPM2P07951 284 aa22.76■■□□□ 1.23
CAPN1-220ENST00000530567 ATF2P15336 505 aa22.76■■□□□ 1.23
CAPN1-220ENST00000530567 CD58P19256 250 aa22.76■■□□□ 1.23
CAPN1-220ENST00000530567 TBXAS1P24557 533 aaPredicted RBP22.76■■□□□ 1.23
CAPN1-220ENST00000530567 TSPY1Q01534 308 aa22.76■■□□□ 1.23
CAPN1-220ENST00000530567 GCNT1Q02742 428 aa22.76■■□□□ 1.23
CAPN1-220ENST00000530567 SLC39A12Q504Y0 691 aa22.76■■□□□ 1.23
CAPN1-220ENST00000530567 FAM171BQ6P995 826 aa22.76■■□□□ 1.23
CAPN1-220ENST00000530567 GJB7Q6PEY0 223 aa22.76■■□□□ 1.23
CAPN1-220ENST00000530567 RRAGAQ7L523 313 aa22.76■■□□□ 1.23
CAPN1-220ENST00000530567 PPM1KQ8N3J5 372 aa22.76■■□□□ 1.23
CAPN1-220ENST00000530567 KREMEN2Q8NCW0 462 aa22.76■■□□□ 1.23
CAPN1-220ENST00000530567 CASP10Q92851 521 aa22.76■■□□□ 1.23
CAPN1-220ENST00000530567 PGLYRP2Q96PD5 576 aa22.76■■□□□ 1.23
CAPN1-220ENST00000530567 CRISPLD1Q9H336 500 aa22.76■■□□□ 1.23
CAPN1-220ENST00000530567 CISHQ9NSE2 258 aa22.76■■□□□ 1.23
CAPN1-220ENST00000530567 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.75■■□□□ 1.23
CAPN1-220ENST00000530567 SEC24AO95486 1093 aa22.75■■□□□ 1.23
CAPN1-220ENST00000530567 ACO1P21399 889 aaKnown RBP22.75■■□□□ 1.23
CAPN1-220ENST00000530567 CDR1P51861 262 aa22.75■■□□□ 1.23
CAPN1-220ENST00000530567 TPM4P67936 248 aa22.75■■□□□ 1.23
CAPN1-220ENST00000530567 ORC1Q13415 861 aa22.75■■□□□ 1.23
CAPN1-220ENST00000530567 UNC93AQ86WB7 457 aa22.75■■□□□ 1.23
CAPN1-220ENST00000530567 GAS2L3Q86XJ1 694 aa22.75■■□□□ 1.23
CAPN1-220ENST00000530567 TTC9BQ8N6N2 239 aa22.75■■□□□ 1.23
CAPN1-220ENST00000530567 FEZF2Q8TBJ5 459 aa22.75■■□□□ 1.23
CAPN1-220ENST00000530567 LPIN3Q9BQK8 851 aa22.75■■□□□ 1.23
CAPN1-220ENST00000530567 FAM124BQ9H5Z6 455 aaPredicted RBP22.75■■□□□ 1.23
CAPN1-220ENST00000530567 RTN4Q9NQC3 1192 aaKnown RBP22.75■■□□□ 1.23
CAPN1-220ENST00000530567 APEX2Q9UBZ4 518 aa22.75■■□□□ 1.23
CAPN1-220ENST00000530567 AJAP1Q9UKB5 411 aaPredicted RBP22.75■■□□□ 1.23
CAPN1-220ENST00000530567 GTF3C4Q9UKN8 822 aa22.75■■□□□ 1.23
CAPN1-220ENST00000530567 SIK3Q9Y2K2 1263 aa22.75■■□□□ 1.23
CAPN1-220ENST00000530567 KLK7P49862 253 aa22.74■■□□□ 1.23
CAPN1-220ENST00000530567 ADCY1Q08828 1119 aa22.74■■□□□ 1.23
CAPN1-220ENST00000530567 SKIV2LQ15477 1246 aaKnown RBP22.74■■□□□ 1.23
CAPN1-220ENST00000530567 FKBP15Q5T1M5 1219 aa22.74■■□□□ 1.23
CAPN1-220ENST00000530567 SYCE2Q6PIF2 218 aa22.74■■□□□ 1.23
CAPN1-220ENST00000530567 DCP1BQ8IZD4 617 aaKnown RBP22.74■■□□□ 1.23
CAPN1-220ENST00000530567 ATAD1Q8NBU5 361 aa22.74■■□□□ 1.23
CAPN1-220ENST00000530567 B3GALNT2Q8NCR0 500 aa22.74■■□□□ 1.23
CAPN1-220ENST00000530567 HDAC7Q8WUI4 952 aa22.74■■□□□ 1.23
CAPN1-220ENST00000530567 MSLNLQ96KJ4 702 aa22.74■■□□□ 1.23
CAPN1-220ENST00000530567 NAP1L5Q96NT1 182 aaPredicted RBP22.74■■□□□ 1.23
CAPN1-220ENST00000530567 ELOVL4Q9GZR5 314 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms