RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 PRR23BQ6ZRT6 265 aa22.4■■□□□ 1.18
TSPAN4-219ENST00000530404 FAM84AQ96KN4 292 aa22.4■■□□□ 1.18
TSPAN4-219ENST00000530404 C8orf33Q9H7E9 229 aaPredicted RBP22.4■■□□□ 1.18
TSPAN4-219ENST00000530404 PARD6AQ9NPB6 346 aa22.4■■□□□ 1.18
TSPAN4-219ENST00000530404 C2orf42Q9NWW7 574 aa22.4■■□□□ 1.18
TSPAN4-219ENST00000530404 DSEQ9UL01 958 aa22.4■■□□□ 1.18
TSPAN4-219ENST00000530404 NCOR2Q9Y618 2525 aa22.39■■□□□ 1.18
TSPAN4-219ENST00000530404 MYBPHLA2RUH7 354 aa22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 MYMKA6NI61 221 aa22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 CHURC1-FNTBB4DL54 471 aa22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 PPP1R37O75864 691 aa22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 FGF19O95750 216 aa22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 CTHP32929 405 aa22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 ABCD1P33897 745 aa22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 FNTBP49356 437 aa22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 TUFMP49411 452 aaKnown RBP22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 NRLP54845 237 aa22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 CEBPZQ03701 1054 aaKnown RBP22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 SRSF5Q13243 272 aaKnown RBP22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 ARHGAP29Q52LW3 1261 aa22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 THEM5Q8N1Q8 247 aa22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 SAAL1Q96ER3 474 aa22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 IER2Q9BTL4 223 aa22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 TASP1Q9H6P5 420 aa22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 MRPL44Q9H9J2 332 aaKnown RBP22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 TMLHEQ9NVH6 421 aa22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 HSFX1Q9UBD0 423 aa22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 FBXO2Q9UK22 296 aaPredicted RBP22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 GMEB2Q9UKD1 530 aa22.39■■□□□ 1.17
TSPAN4-219ENST00000530404 HAPLN1P10915 354 aaPredicted RBP22.38■■□□□ 1.17
TSPAN4-219ENST00000530404 TGM1P22735 817 aa22.38■■□□□ 1.17
TSPAN4-219ENST00000530404 PAX3P23760 479 aa22.38■■□□□ 1.17
TSPAN4-219ENST00000530404 GPR15P49685 360 aa22.38■■□□□ 1.17
TSPAN4-219ENST00000530404 MLLT6P55198 1093 aaPredicted RBP22.38■■□□□ 1.17
TSPAN4-219ENST00000530404 LRRC32Q14392 662 aa22.38■■□□□ 1.17
TSPAN4-219ENST00000530404 TAF12Q16514 161 aa22.38■■□□□ 1.17
TSPAN4-219ENST00000530404 HEATR6Q6AI08 1181 aaKnown RBP22.38■■□□□ 1.17
TSPAN4-219ENST00000530404 MAMSTRQ6ZN01 415 aa22.38■■□□□ 1.17
TSPAN4-219ENST00000530404 BPIFB1Q8TDL5 484 aa22.38■■□□□ 1.17
TSPAN4-219ENST00000530404 MSANTD3Q96H12 275 aa22.38■■□□□ 1.17
TSPAN4-219ENST00000530404 GCNAQ96QF7 691 aa22.38■■□□□ 1.17
TSPAN4-219ENST00000530404 FAM213AQ9BRX8 229 aa22.38■■□□□ 1.17
TSPAN4-219ENST00000530404 SLC46A2Q9BY10 475 aa22.38■■□□□ 1.17
TSPAN4-219ENST00000530404 CCDC39Q9UFE4 941 aa22.38■■□□□ 1.17
TSPAN4-219ENST00000530404 LAMA1P25391 3075 aa22.37■■□□□ 1.17
TSPAN4-219ENST00000530404 KPNA7A9QM74 516 aa22.37■■□□□ 1.17
TSPAN4-219ENST00000530404 CDC25CP30307 473 aa22.37■■□□□ 1.17
TSPAN4-219ENST00000530404 CASP5P51878 434 aa22.37■■□□□ 1.17
TSPAN4-219ENST00000530404 SPEM2Q0P670 501 aa22.37■■□□□ 1.17
TSPAN4-219ENST00000530404 SV2CQ496J9 727 aa22.37■■□□□ 1.17
TSPAN4-219ENST00000530404 SDHAF4Q5VUM1 108 aa22.37■■□□□ 1.17
TSPAN4-219ENST00000530404 SPEM1Q8N4L4 309 aa22.37■■□□□ 1.17
TSPAN4-219ENST00000530404 SPPL2BQ8TCT7 592 aa22.37■■□□□ 1.17
TSPAN4-219ENST00000530404 HVCN1Q96D96 273 aa22.37■■□□□ 1.17
TSPAN4-219ENST00000530404 DNAJC19Q96DA6 116 aa22.37■■□□□ 1.17
TSPAN4-219ENST00000530404 STRA6Q9BX79 667 aa22.37■■□□□ 1.17
TSPAN4-219ENST00000530404 FGFBP2Q9BYJ0 223 aa22.37■■□□□ 1.17
TSPAN4-219ENST00000530404 STK17AQ9UEE5 414 aa22.37■■□□□ 1.17
TSPAN4-219ENST00000530404 RAB23Q9ULC3 237 aa22.37■■□□□ 1.17
TSPAN4-219ENST00000530404 GOLGA8IPA6NC78 632 aa22.36■■□□□ 1.17
TSPAN4-219ENST00000530404 GOLGA8JA6NMD2 632 aa22.36■■□□□ 1.17
TSPAN4-219ENST00000530404 IL18RAPO95256 599 aa22.36■■□□□ 1.17
TSPAN4-219ENST00000530404 GCNT3O95395 438 aa22.36■■□□□ 1.17
TSPAN4-219ENST00000530404 POLR2BP30876 1174 aaKnown RBP22.36■■□□□ 1.17
TSPAN4-219ENST00000530404 ATXN1P54253 815 aaKnown RBP22.36■■□□□ 1.17
TSPAN4-219ENST00000530404 TFAMQ00059 246 aaKnown RBP22.36■■□□□ 1.17
TSPAN4-219ENST00000530404 L1TD1Q5T7N2 865 aaKnown RBP22.36■■□□□ 1.17
TSPAN4-219ENST00000530404 RRAGBQ5VZM2 374 aa22.36■■□□□ 1.17
TSPAN4-219ENST00000530404 TMEM150AQ86TG1 271 aa22.36■■□□□ 1.17
TSPAN4-219ENST00000530404 RALGPS2Q86X27 583 aaPredicted RBP22.36■■□□□ 1.17
TSPAN4-219ENST00000530404 GPR161Q8N6U8 529 aaKnown RBP22.36■■□□□ 1.17
TSPAN4-219ENST00000530404 NOC3LQ8WTT2 800 aaKnown RBP22.36■■□□□ 1.17
TSPAN4-219ENST00000530404 ZNF560Q96MR9 790 aa22.36■■□□□ 1.17
TSPAN4-219ENST00000530404 PI4K2AQ9BTU6 479 aa22.36■■□□□ 1.17
TSPAN4-219ENST00000530404 OBP2AQ9NY56 170 aa22.36■■□□□ 1.17
TSPAN4-219ENST00000530404 CCL26Q9Y258 94 aa22.36■■□□□ 1.17
TSPAN4-219ENST00000530404 K7ESF4 209 aa22.35■■□□□ 1.17
TSPAN4-219ENST00000530404 HRO43593 1189 aa22.35■■□□□ 1.17
TSPAN4-219ENST00000530404 ITGB3P05106 788 aa22.35■■□□□ 1.17
TSPAN4-219ENST00000530404 RESTQ13127 1097 aa22.35■■□□□ 1.17
TSPAN4-219ENST00000530404 CUL4AQ13619 759 aa22.35■■□□□ 1.17
TSPAN4-219ENST00000530404 POSTNQ15063 836 aa22.35■■□□□ 1.17
TSPAN4-219ENST00000530404 SV2BQ7L1I2 683 aa22.35■■□□□ 1.17
TSPAN4-219ENST00000530404 DCP1BQ8IZD4 617 aaKnown RBP22.35■■□□□ 1.17
TSPAN4-219ENST00000530404 CELF5Q8N6W0 485 aaKnown RBP22.35■■□□□ 1.17
TSPAN4-219ENST00000530404 MAB21L3Q8N8X9 362 aa22.35■■□□□ 1.17
TSPAN4-219ENST00000530404 C2orf15Q8WU43 125 aaKnown RBP22.35■■□□□ 1.17
TSPAN4-219ENST00000530404 ACCSQ96QU6 501 aa22.35■■□□□ 1.17
TSPAN4-219ENST00000530404 PANK2Q9BZ23 570 aa22.35■■□□□ 1.17
TSPAN4-219ENST00000530404 MAGED2Q9UNF1 606 aaPredicted RBP22.35■■□□□ 1.17
TSPAN4-219ENST00000530404 AGAP1Q9UPQ3 857 aa22.35■■□□□ 1.17
TSPAN4-219ENST00000530404 PCDHB5Q9Y5E4 795 aa22.35■■□□□ 1.17
TSPAN4-219ENST00000530404 SRPRBQ9Y5M8 271 aaKnown RBP22.35■■□□□ 1.17
TSPAN4-219ENST00000530404 MYOFQ9NZM1 2061 aa22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 PRPF40AO75400 957 aaKnown RBP22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 CENPBP07199 599 aaPredicted RBP22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 IDEP14735 1019 aa22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 HMGA1P17096 107 aaKnown RBP22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 ACAT1P24752 427 aaKnown RBP22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 SIM2Q14190 667 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms