RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 PGLYRP2Q96PD5 576 aa8.43□□□□□ -1.06
CCDC90B-212ENST00000529312 IER2Q9BTL4 223 aa8.43□□□□□ -1.06
CCDC90B-212ENST00000529312 DDX23Q9BUQ8 820 aaKnown RBP8.43□□□□□ -1.06
CCDC90B-212ENST00000529312 ATXN3LQ9H3M9 355 aa8.43□□□□□ -1.06
CCDC90B-212ENST00000529312 C8orf33Q9H7E9 229 aaPredicted RBP8.43□□□□□ -1.06
CCDC90B-212ENST00000529312 FAM86C1Q9NVL1 165 aa8.43□□□□□ -1.06
CCDC90B-212ENST00000529312 GDAP2Q9NXN4 497 aa8.43□□□□□ -1.06
CCDC90B-212ENST00000529312 OBP2AQ9NY56 170 aa8.43□□□□□ -1.06
CCDC90B-212ENST00000529312 RBAKQ9NYW8 714 aaPredicted RBP8.43□□□□□ -1.06
CCDC90B-212ENST00000529312 USP25Q9UHP3 1055 aa8.43□□□□□ -1.06
CCDC90B-212ENST00000529312 RCOR1Q9UKL0 485 aa8.43□□□□□ -1.06
CCDC90B-212ENST00000529312 FBXO4Q9UKT5 387 aa8.43□□□□□ -1.06
CCDC90B-212ENST00000529312 YIPF1Q9Y548 306 aa8.43□□□□□ -1.06
CCDC90B-212ENST00000529312 PCDHB5Q9Y5E4 795 aa8.43□□□□□ -1.06
CCDC90B-212ENST00000529312 PCDHGA4Q9Y5G9 962 aa8.43□□□□□ -1.06
CCDC90B-212ENST00000529312 ATP6V1DQ9Y5K8 247 aa8.43□□□□□ -1.06
CCDC90B-212ENST00000529312 PLXNA3P51805 1871 aa8.43□□□□□ -1.06
CCDC90B-212ENST00000529312 C2orf16Q68DN1 1984 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 MTMR11A4FU01 709 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 SPTLC1O15269 473 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 CHADO15335 359 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 POLR2DO15514 142 aaKnown RBP8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 KIF20AO95235 890 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 F13A1P00488 732 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 DCNP07585 359 aaKnown RBP8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 KRT19P08727 400 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 OR4Q2P0C623 313 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 CSH1P0DML2 217 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 CSH2P0DML3 217 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 HAPLN1P10915 354 aaPredicted RBP8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 CEBPBP17676 345 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 DDX6P26196 483 aaKnown RBP eCLIP8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 GDI1P31150 447 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 RPS9P46781 194 aaKnown RBP8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 NRLP54845 237 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 ASIC1P78348 528 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 PLCB2Q00722 1185 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 KCNA1Q09470 495 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 MAPRE1Q15691 268 aaKnown RBP8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 ZNF528Q3MIS6 628 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 SLC39A12Q504Y0 691 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 ARHGAP29Q52LW3 1261 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 UNC13DQ70J99 1090 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 ARID3BQ8IVW6 561 aaPredicted RBP8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 TOP6BLQ8N6T0 577 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 GOLGA5Q8TBA6 731 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 ATRIPQ8WXE1 791 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 CCDC47Q96A33 483 aaKnown RBP8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 EXOC4Q96A65 974 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 CLDN23Q96B33 292 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 TCEAL4Q96EI5 215 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 SAAL1Q96ER3 474 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 CCDC34Q96HJ3 373 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 FNBP1Q96RU3 617 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 FAM126AQ9BYI3 521 aaPredicted RBP8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 PLA2G2FQ9BZM2 168 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 TRIM9Q9C026 710 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 PCIF1Q9H4Z3 704 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 TASP1Q9H6P5 420 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 ZNF334Q9HCZ1 680 aaPredicted RBP8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 LTB4R2Q9NPC1 389 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 INTS13Q9NVM9 706 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 SPATA6Q9NWH7 488 aaPredicted RBP8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 EHD2Q9NZN4 543 aa8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 UXTQ9UBK9 157 aaPredicted RBP8.42□□□□□ -1.06
CCDC90B-212ENST00000529312 RIF1Q5UIP0 2472 aaKnown RBP8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 VWA8A3KMH1 1905 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 A0A1W2PRU2 124 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 GOLGA8IPA6NC78 632 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 GOLGA8JA6NMD2 632 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 HEPACAM2A8MVW5 462 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 TISP43B9A030 160 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 PPEF2O14830 753 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 MOSPD3O75425 235 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 LMNAP02545 664 aaKnown RBP8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 ITGB3P05106 788 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 MYL1P05976 194 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 TNNI1P19237 187 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 GABRR2P28476 465 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 POLR2BP30876 1174 aaKnown RBP8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 VIPR2P41587 438 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 CCR2P41597 374 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 KPNA1P52294 538 aaPredicted RBP8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 AP3M2P53677 418 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 BFSP1Q12934 665 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 TEAD2Q15562 447 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 E2F4Q16254 413 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 FAM26FQ5R3K3 315 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 GPR158Q5T848 1215 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 FOXD4L5Q5VV16 416 aaPredicted RBP8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 SHC4Q6S5L8 630 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 C4orf50Q6ZRC1 276 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 TPRG1Q6ZUI0 275 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 FRMD5Q7Z6J6 570 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 LRRTM3Q86VH5 581 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 EFCAB13Q8IY85 973 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 CELF5Q8N6W0 485 aaKnown RBP8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 XXYLT1Q8NBI6 393 aa8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 ST13P5Q8NFI4 369 aaPredicted RBP8.41□□□□□ -1.06
CCDC90B-212ENST00000529312 SHKBP1Q8TBC3 707 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms