RNA–Protein interactions for RNA: ENST00000528906.5

PSMD13-208, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 858 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-208	ENST00000528906	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	OSTM1	Q86WC4	334 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	SLC39A11	Q8N1S5	342 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	COLGALT1	Q8NBJ5	622 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	SLC30A5	Q8TAD4	765 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	HASPIN	Q8TF76	798 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	DDX1	Q92499	740 aa	Known RBP	13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	CLP1	Q92989	425 aa	Known RBP	13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	TMEM169	Q96HH4	297 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	TWNK	Q96RR1	684 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	CDH9	Q9ULB4	789 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	PCDHGC3	Q9UN70	934 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	ZKSCAN5	Q9Y2L8	839 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	RWDD3	Q9Y3V2	267 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	NT5C1B-RDH14	C9J2C7	533 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906		F8W810	466 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906		H7C4K7	107 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	DDX3X	O00571	662 aa	Known RBP eCLIP	13.89	□□□□□ -0.19	4e-16	■■■■□ 25.1
PSMD13-208	ENST00000528906	ZSCAN12	O43309	604 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	LSM8	O95777	96 aa	Known RBP	13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	CCDC175	P0C221	793 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	CHRNB2	P17787	502 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	PTPN1	P18031	435 aa	Known RBP	13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	LMO2	P25791	158 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	TSPY1	Q01534	308 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	KRT17	Q04695	432 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	SHH	Q15465	462 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	MAPRE1	Q15691	268 aa	Known RBP	13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	USP41	Q3LFD5	358 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	TAF3	Q5VWG9	929 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	ARHGAP17	Q68EM7	881 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	ALKBH5	Q6P6C2	394 aa	Known RBP	13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	ACOT1	Q86TX2	421 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	GPIHBP1	Q8IV16	184 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	GLYCTK	Q8IVS8	523 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	GPR65	Q8IYL9	337 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	SLC20A1	Q8WUM9	679 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	GDF15	Q99988	308 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	TTPAL	Q9BTX7	342 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	GPR62	Q9BZJ7	368 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	UBE2O	Q9C0C9	1292 aa	Known RBP	13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	ZNF518B	Q9C0D4	1074 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	LHX5	Q9H2C1	402 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	ACP6	Q9NPH0	428 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	SEPT11	Q9NVA2	429 aa	Known RBP	13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	PCDH10	Q9P2E7	1040 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	HCST	Q9UBK5	93 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	HMGXB4	Q9UGU5	601 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	CEP83	Q9Y592	693 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906	ANK1	P16157	1881 aa		13.89	□□□□□ -0.19
PSMD13-208	ENST00000528906		A0A087X0T9	212 aa		13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	OR6C75	A6NL08	312 aa		13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	EFEMP2	O95967	443 aa		13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	MME	P08473	750 aa		13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	FAM228B	P0C875	321 aa		13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	BRD2	P25440	801 aa	Known RBP	13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	RGS19	P49795	217 aa		13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	FMO1	Q01740	532 aa		13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	GFPT1	Q06210	699 aa	Predicted RBP	13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	MRPL58	Q14197	206 aa	Known RBP	13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	MTF1	Q14872	753 aa		13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	C9orf50	Q5SZB4	431 aa		13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	CCDC122	Q5T0U0	273 aa		13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	LCLAT1	Q6UWP7	414 aa		13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	ANKS3	Q6ZW76	656 aa		13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	DDX53	Q86TM3	631 aa	Known RBP	13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	B3GALNT2	Q8NCR0	500 aa		13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	TMEM35B	Q8NCS4	154 aa		13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	TFAP2B	Q92481	460 aa		13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	SYT15	Q9BQS2	421 aa		13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	PLVAP	Q9BX97	442 aa		13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	NAGPA	Q9UK23	515 aa		13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906	ADGRG1	Q9Y653	693 aa		13.88	□□□□□ -0.19
PSMD13-208	ENST00000528906		H0YGN5	161 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906		O00370	1275 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	RTN2	O75298	545 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	SOD2	P04179	222 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	TKT	P29401	623 aa	Known RBP	13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	BMP8B	P34820	402 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	BMPR1A	P36894	532 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	PBX3	P40426	434 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	MAGEA1	P43355	309 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	PLCB3	Q01970	1234 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	ORC1	Q13415	861 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	CLEC16A	Q2KHT3	1053 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	VARS2	Q5ST30	1063 aa	Known RBP	13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	ZNF280D	Q6N043	979 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	KIAA1841	Q6NSI8	718 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	TOGARAM2	Q6ZUX3	1019 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	ZSCAN30	Q86W11	494 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	CEP57	Q86XR8	500 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	DCP1B	Q8IZD4	617 aa	Known RBP	13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	LNX1	Q8TBB1	728 aa	Predicted RBP	13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	MYCBPAP	Q8TBZ2	947 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	KIAA1524	Q8TCG1	905 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	CYFIP2	Q96F07	1278 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	SAMD11	Q96NU1	681 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	NOX5	Q96PH1	765 aa		13.87	□□□□□ -0.19
PSMD13-208	ENST00000528906	PCDHB18P	Q96TA0	734 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms