RNA–Protein interactions for RNA: ENST00000528895.5

TM9SF1-207, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-207ENST00000528895 EPHB4P54760 987 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 BCAR1P56945 870 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 STILQ15468 1287 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 SLC18A3Q16572 532 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 TIGD5Q53EQ6 642 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 RAD9BQ6WBX8 426 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 ZNF571Q7Z3V5 609 aaPredicted RBP12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 LIMS2Q7Z4I7 341 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 NOP9Q86U38 636 aaKnown RBP12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 ZSCAN30Q86W11 494 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 HERC6Q8IVU3 1022 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 THEM5Q8N1Q8 247 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 KBTBD7Q8WVZ9 684 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 RABGGTAQ92696 567 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 UBE2OQ9C0C9 1292 aaKnown RBP12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 CWH43Q9H720 699 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 MTMR10Q9NXD2 777 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 STK39Q9UEW8 545 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 INSL6Q9Y581 213 aa12.56□□□□□ -0.4
TM9SF1-207ENST00000528895 GALTP07902 379 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 GNL1P36915 607 aaPredicted RBP12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 RAD23BP54727 409 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 HTRA4P83105 476 aaPredicted RBP12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 MTF1Q14872 753 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 SGO2Q562F6 1265 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 C10orf76Q5T2E6 689 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 TAF3Q5VWG9 929 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 WSCD1Q658N2 575 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 OVOS1Q6IE37 1185 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 FUT10Q6P4F1 479 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 KIAA1328Q86T90 577 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 FIBCD1Q8N539 461 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 SLC4A11Q8NBS3 891 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 SLC20A1Q8WUM9 679 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 TMEM169Q96HH4 297 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 RNPC3Q96LT9 517 aaKnown RBP12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 ELOVL4Q9GZR5 314 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 SPTLC3Q9NUV7 552 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 MARCH5Q9NX47 278 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 DDX43Q9NXZ2 648 aaKnown RBP12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 CXXC1Q9P0U4 656 aaPredicted RBP12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 HMGXB4Q9UGU5 601 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 ADAMTS1Q9UHI8 967 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 MRPL42Q9Y6G3 142 aaKnown RBP12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 EPN1Q9Y6I3 576 aaPredicted RBP12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 SPTBN5Q9NRC6 3674 aaKnown RBP12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 SCN1AP35498 2009 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 ATP8B3O60423 1300 aa12.55□□□□□ -0.4
TM9SF1-207ENST00000528895 GOLGA6L9A6NEM1 432 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 I3L4J1 428 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 GABRDO14764 452 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 TLL1O43897 1013 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 LCA5LO95447 670 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 LSM8O95777 96 aaKnown RBP12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 ITGB1P05556 798 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 BRD2P25440 801 aaKnown RBP12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 TSPY1Q01534 308 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 YWHAHQ04917 246 aaPredicted RBP12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 GFPT1Q06210 699 aaPredicted RBP12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 ASTE1Q2TB18 679 aaPredicted RBP12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 KCNT2Q6UVM3 1135 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 CD300LGQ6UXG3 332 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 TOGARAM2Q6ZUX3 1019 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 TMCO2Q7Z6W1 182 aaPredicted RBP12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 GLYCTKQ8IVS8 523 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 COLGALT1Q8NBJ5 622 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 MSANTD4Q8NCY6 345 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 WHAMMQ8TF30 809 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 ZNF606Q8WXB4 792 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 HEXIM2Q96MH2 286 aaKnown RBP12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 TWNKQ96RR1 684 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 RAD9AQ99638 391 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 SYT15Q9BQS2 421 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 DESI2Q9BSY9 194 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 SYT11Q9BT88 431 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 TSGA10Q9BZW7 698 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 HCSTQ9UBK5 93 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 HESX1Q9UBX0 185 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 CDH9Q9ULB4 789 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 PYCARDQ9ULZ3 195 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 PCDHGC3Q9UN70 934 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 RWDD3Q9Y3V2 267 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 FARP1Q9Y4F1 1045 aaPredicted RBP12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 PCDHB12Q9Y5F1 795 aa12.54□□□□□ -0.4
TM9SF1-207ENST00000528895 PTPRSQ13332 1948 aa12.53□□□□□ -0.4
TM9SF1-207ENST00000528895 A0A087X0T9 212 aa12.53□□□□□ -0.4
TM9SF1-207ENST00000528895 M0QYV0 167 aa12.53□□□□□ -0.4
TM9SF1-207ENST00000528895 DDX3XO00571 662 aaKnown RBP eCLIP12.53□□□□□ -0.45e-16■■■□□ 16.5
TM9SF1-207ENST00000528895 MMEP08473 750 aa12.53□□□□□ -0.4
TM9SF1-207ENST00000528895 FAM228BP0C875 321 aa12.53□□□□□ -0.4
TM9SF1-207ENST00000528895 NSFP46459 744 aaKnown RBP12.53□□□□□ -0.4
TM9SF1-207ENST00000528895 FMO1Q01740 532 aa12.53□□□□□ -0.4
TM9SF1-207ENST00000528895 ORC1Q13415 861 aa12.53□□□□□ -0.4
TM9SF1-207ENST00000528895 MAPRE1Q15691 268 aaKnown RBP12.53□□□□□ -0.4
TM9SF1-207ENST00000528895 CCDC122Q5T0U0 273 aa12.53□□□□□ -0.4
TM9SF1-207ENST00000528895 ZNF280DQ6N043 979 aa12.53□□□□□ -0.4
TM9SF1-207ENST00000528895 ACOT1Q86TX2 421 aa12.53□□□□□ -0.4
TM9SF1-207ENST00000528895 OSTM1Q86WC4 334 aa12.53□□□□□ -0.4
TM9SF1-207ENST00000528895 B3GALNT2Q8NCR0 500 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms