RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 UCP3P55916 312 aa7.17□□□□□ -1.26
PCF11-202ENST00000528336 FAM193AP78312 1265 aa7.17□□□□□ -1.26
PCF11-202ENST00000528336 HSP90AB4PQ58FF6 505 aa7.17□□□□□ -1.26
PCF11-202ENST00000528336 ZNF783Q6ZMS7 281 aa7.17□□□□□ -1.26
PCF11-202ENST00000528336 PPP1R32Q7Z5V6 425 aa7.17□□□□□ -1.26
PCF11-202ENST00000528336 CCAR1Q8IX12 1150 aaKnown RBP7.17□□□□□ -1.26
PCF11-202ENST00000528336 SMC5Q8IY18 1101 aa7.17□□□□□ -1.26
PCF11-202ENST00000528336 OR6B3Q8NGW1 331 aa7.17□□□□□ -1.26
PCF11-202ENST00000528336 ANKS1AQ92625 1134 aa7.17□□□□□ -1.26
PCF11-202ENST00000528336 TRIM54Q9BYV2 358 aa7.17□□□□□ -1.26
PCF11-202ENST00000528336 CYP4F11Q9HBI6 524 aa7.17□□□□□ -1.26
PCF11-202ENST00000528336 CPNE7Q9UBL6 633 aa7.17□□□□□ -1.26
PCF11-202ENST00000528336 FAM50BQ9Y247 325 aa7.17□□□□□ -1.26
PCF11-202ENST00000528336 PLEKHM1Q9Y4G2 1056 aa7.17□□□□□ -1.26
PCF11-202ENST00000528336 RAD54BQ9Y620 910 aa7.17□□□□□ -1.26
PCF11-202ENST00000528336 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 CCDC194A0A1B0GVG4 234 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 F5H697 171 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 MYO1CO00159 1063 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 TBX3O15119 743 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 TBC1D4O60343 1298 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 MAP4K4O95819 1239 aaPredicted RBP7.16□□□□□ -1.26
PCF11-202ENST00000528336 EGR2P11161 476 aaPredicted RBP7.16□□□□□ -1.26
PCF11-202ENST00000528336 PEX2P28328 305 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 ACVRL1P37023 503 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 TOB1P50616 345 aaPredicted RBP7.16□□□□□ -1.26
PCF11-202ENST00000528336 SUMO3P55854 103 aaPredicted RBP7.16□□□□□ -1.26
PCF11-202ENST00000528336 SCAPQ12770 1279 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 TCF15Q12870 199 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 KLF10Q13118 480 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 SP5Q6BEB4 398 aaPredicted RBP7.16□□□□□ -1.26
PCF11-202ENST00000528336 CYB5RLQ6IPT4 315 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 SLC16A11Q8NCK7 471 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 KBTBD7Q8WVZ9 684 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 SNX19Q92543 992 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 SLC46A1Q96NT5 459 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 APOL5Q9BWW9 433 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 SACM1LQ9NTJ5 587 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 HESX1Q9UBX0 185 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 ING1Q9UK53 422 aaPredicted RBP7.16□□□□□ -1.26
PCF11-202ENST00000528336 TMX2Q9Y320 296 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 SMARCA4P51532 1647 aa7.16□□□□□ -1.26
PCF11-202ENST00000528336 E7ENX8 843 aa7.15□□□□□ -1.26
PCF11-202ENST00000528336 MGEA5O60502 916 aa7.15□□□□□ -1.26
PCF11-202ENST00000528336 THP07101 528 aa7.15□□□□□ -1.26
PCF11-202ENST00000528336 BRAFP15056 766 aa7.15□□□□□ -1.26
PCF11-202ENST00000528336 NPTX2P47972 431 aa7.15□□□□□ -1.26
PCF11-202ENST00000528336 ARFIP2P53365 341 aa7.15□□□□□ -1.26
PCF11-202ENST00000528336 TAP2Q03519 686 aa7.15□□□□□ -1.26
PCF11-202ENST00000528336 CTBP1Q13363 440 aa7.15□□□□□ -1.26
PCF11-202ENST00000528336 FHL2Q14192 279 aa7.15□□□□□ -1.26
PCF11-202ENST00000528336 ABHD17BQ5VST6 288 aa7.15□□□□□ -1.26
PCF11-202ENST00000528336 KSR2Q6VAB6 950 aa7.15□□□□□ -1.26
PCF11-202ENST00000528336 SLC15A4Q8N697 577 aa7.15□□□□□ -1.26
PCF11-202ENST00000528336 DNAJC5GQ8N7S2 189 aa7.15□□□□□ -1.26
PCF11-202ENST00000528336 SLC30A5Q8TAD4 765 aa7.15□□□□□ -1.26
PCF11-202ENST00000528336 SSH3Q8TE77 659 aa7.15□□□□□ -1.26
PCF11-202ENST00000528336 TTC17Q96AE7 1141 aa7.15□□□□□ -1.26
PCF11-202ENST00000528336 Q96MF0 132 aa7.15□□□□□ -1.26
PCF11-202ENST00000528336 INTS13Q9NVM9 706 aa7.15□□□□□ -1.26
PCF11-202ENST00000528336 GEMIN8Q9NWZ8 242 aaKnown RBP7.15□□□□□ -1.26
PCF11-202ENST00000528336 XPR1Q9UBH6 696 aa7.15□□□□□ -1.26
PCF11-202ENST00000528336 MYO1FO00160 1098 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 EIF3JO75822 258 aaKnown RBP7.14□□□□□ -1.27
PCF11-202ENST00000528336 MYF5P13349 255 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 ZKSCAN1P17029 563 aaPredicted RBP7.14□□□□□ -1.27
PCF11-202ENST00000528336 EN2P19622 333 aaPredicted RBP7.14□□□□□ -1.27
PCF11-202ENST00000528336 ITGALP20701 1170 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 GNALP38405 381 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 GCLCP48506 637 aaPredicted RBP7.14□□□□□ -1.27
PCF11-202ENST00000528336 SLC11A2P49281 568 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 NDUFV1P49821 464 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 SETQ01105 290 aaPredicted RBP7.14□□□□□ -1.27
PCF11-202ENST00000528336 FSTL1Q12841 308 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 SLC13A2Q13183 592 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 SF3B3Q15393 1217 aaKnown RBP7.14□□□□□ -1.27
PCF11-202ENST00000528336 LONRF3Q496Y0 759 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 COBLL1Q53SF7 1204 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 LAIR1Q6GTX8 287 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 LAYNQ6UX15 382 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 MICALCLQ6ZW33 695 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 TMPRSS9Q7Z410 1059 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 MROH2BQ7Z745 1585 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 ULK2Q8IYT8 1036 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 MPP5Q8N3R9 675 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 SLC44A3Q8N4M1 653 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 HEPHQ9BQS7 1158 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 AIFM2Q9BRQ8 373 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 TTPALQ9BTX7 342 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 KRTAP4-7Q9BYR0 210 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 LRRC27Q9C0I9 530 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 KIAA1586Q9HCI6 787 aa7.14□□□□□ -1.27
PCF11-202ENST00000528336 COL4A3Q01955 1670 aa7.13□□□□□ -1.27
PCF11-202ENST00000528336 A0A0B4J269 797 aa7.13□□□□□ -1.27
PCF11-202ENST00000528336 TMEM233B4DJY2 109 aa7.13□□□□□ -1.27
PCF11-202ENST00000528336 PRC1O43663 620 aa7.13□□□□□ -1.27
PCF11-202ENST00000528336 FMO1Q01740 532 aa7.13□□□□□ -1.27
PCF11-202ENST00000528336 TUBB3Q13509 450 aa7.13□□□□□ -1.27
PCF11-202ENST00000528336 SEMA5AQ13591 1074 aa7.13□□□□□ -1.27
PCF11-202ENST00000528336 HLXQ14774 488 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms