RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 PCSK1P29120 753 aa13□□□□□ -0.33
TRAPPC4-209ENST00000528230 ATICP31939 592 aa13□□□□□ -0.33
TRAPPC4-209ENST00000528230 SOWAHAQ2M3V2 549 aa13□□□□□ -0.33
TRAPPC4-209ENST00000528230 PARM1Q6UWI2 310 aa13□□□□□ -0.33
TRAPPC4-209ENST00000528230 ITIH5Q86UX2 942 aa13□□□□□ -0.33
TRAPPC4-209ENST00000528230 HS6ST3Q8IZP7 471 aa13□□□□□ -0.33
TRAPPC4-209ENST00000528230 TMC2Q8TDI7 906 aa13□□□□□ -0.33
TRAPPC4-209ENST00000528230 FGF14Q92915 247 aa13□□□□□ -0.33
TRAPPC4-209ENST00000528230 PSMG2Q969U7 264 aa13□□□□□ -0.33
TRAPPC4-209ENST00000528230 MCRS1Q96EZ8 462 aa13□□□□□ -0.33
TRAPPC4-209ENST00000528230 FAM84AQ96KN4 292 aa13□□□□□ -0.33
TRAPPC4-209ENST00000528230 GSDMAQ96QA5 445 aa13□□□□□ -0.33
TRAPPC4-209ENST00000528230 LRRC3Q9BY71 257 aa13□□□□□ -0.33
TRAPPC4-209ENST00000528230 GTPBP4Q9BZE4 634 aaKnown RBP13□□□□□ -0.33
TRAPPC4-209ENST00000528230 DNAJC25Q9H1X3 360 aa13□□□□□ -0.33
TRAPPC4-209ENST00000528230 SLC2A4RGQ9NR83 387 aa13□□□□□ -0.33
TRAPPC4-209ENST00000528230 HOOK1Q9UJC3 728 aaKnown RBP13□□□□□ -0.33
TRAPPC4-209ENST00000528230 FRMD4BQ9Y2L6 1034 aa13□□□□□ -0.33
TRAPPC4-209ENST00000528230 PCDHB5Q9Y5E4 795 aa13□□□□□ -0.33
TRAPPC4-209ENST00000528230 KMT2EQ8IZD2 1858 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 IKBKBO14920 756 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 MOSPD3O75425 235 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 ECI2O75521 394 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 CEBPBP17676 345 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 WARSP23381 471 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 RPL13P26373 211 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 CCR2P41597 374 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 NUBP1P53384 320 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 ENPEPQ07075 957 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 TRPC3Q13507 836 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 MGAT5BQ3V5L5 792 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 COBLL1Q53SF7 1204 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 INTS6LQ5JSJ4 861 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 DNAJB7Q7Z6W7 309 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 ADGRF2Q8IZF7 708 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 SPATA20Q8TB22 786 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 PLEKHO2Q8TD55 490 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 ING5Q8WYH8 240 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 SYAP1Q96A49 352 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 TCEAL4Q96EI5 215 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 PKMYT1Q99640 499 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 PRRX2Q99811 253 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 RPP25Q9BUL9 199 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 VRTNQ9H8Y1 702 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 ABCB6Q9NP58 842 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 DENND4CQ5VZ89 1909 aa12.99□□□□□ -0.33
TRAPPC4-209ENST00000528230 LRRIQ3A6PVS8 624 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 NARSO43776 548 aaKnown RBP12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 PHACTR2O75167 634 aa12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 TACC1O75410 805 aa12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 SMC2O95347 1197 aa12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 C4BPAP04003 597 aaKnown RBP12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 MYL4P12829 197 aa12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 AVPR2P30518 371 aa12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 CASP4P49662 377 aa12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 CLCN5P51795 746 aa12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 MCCD1P59942 119 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 PNOCQ13519 176 aa12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 VEPH1Q14D04 833 aa12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 EDRF1Q3B7T1 1238 aa12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 ZNF658Q5TYW1 1059 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 FAM171BQ6P995 826 aa12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 OSTM1Q86WC4 334 aa12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 TMC8Q8IU68 726 aa12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 TTC9BQ8N6N2 239 aa12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 ELSPBP1Q96BH3 223 aa12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 FUBP3Q96I24 572 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 SEPT5Q99719 369 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 TMLHEQ9NVH6 421 aa12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 RAPGEFL1Q9UHV5 662 aa12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 FBXL21Q9UKT6 434 aa12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 CDH9Q9ULB4 789 aa12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 MAPK8IP1Q9UQF2 711 aa12.98□□□□□ -0.33
TRAPPC4-209ENST00000528230 PDGFBP01127 241 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 NR2F2P24468 414 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 MYL6P60660 151 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 RPL10AP62906 217 aaKnown RBP12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 TNNC1P63316 161 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 ADAM9Q13443 819 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 MAPRE1Q15691 268 aaKnown RBP12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 WDR72Q3MJ13 1102 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 CFAP221Q4G0U5 840 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 ZCWPW2Q504Y3 356 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 TDRD10Q5VZ19 366 aaKnown RBP12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 CEP135Q66GS9 1140 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 SHKBP1Q8TBC3 707 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 FAM200AQ8TCP9 573 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 KBTBD7Q8WVZ9 684 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 SMARCD2Q92925 531 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 E2F7Q96AV8 911 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 ASB16Q96NS5 453 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 MMS19Q96T76 1030 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 XYLT2Q9H1B5 865 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 MFSD1Q9H3U5 465 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 TRPV4Q9HBA0 871 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 ZFP14Q9HCL3 533 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 ABI2Q9NYB9 513 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 ZMYM5Q9UJ78 669 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 GTF3C4Q9UKN8 822 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 PCDHA5Q9Y5H7 936 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms