RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 FAM86C1Q9NVL1 165 aa24.89■■□□□ 1.58
PKP3-206ENST00000528036 OBP2AQ9NY56 170 aa24.89■■□□□ 1.58
PKP3-206ENST00000528036 SOBPA7XYQ1 873 aa24.88■■□□□ 1.57
PKP3-206ENST00000528036 HAPLN1P10915 354 aaPredicted RBP24.88■■□□□ 1.57
PKP3-206ENST00000528036 KRT85P78386 507 aa24.88■■□□□ 1.57
PKP3-206ENST00000528036 BFSP1Q12934 665 aa24.88■■□□□ 1.57
PKP3-206ENST00000528036 BMT2Q1RMZ1 405 aa24.88■■□□□ 1.57
PKP3-206ENST00000528036 PDCL2Q8N4E4 241 aa24.88■■□□□ 1.57
PKP3-206ENST00000528036 FNBP1Q96RU3 617 aa24.88■■□□□ 1.57
PKP3-206ENST00000528036 PLA2G2FQ9BZM2 168 aa24.88■■□□□ 1.57
PKP3-206ENST00000528036 MTMR12Q9C0I1 747 aa24.88■■□□□ 1.57
PKP3-206ENST00000528036 AGPAT3Q9NRZ7 376 aa24.88■■□□□ 1.57
PKP3-206ENST00000528036 DLGAP2Q9P1A6 1054 aa24.88■■□□□ 1.57
PKP3-206ENST00000528036 GTF3C3Q9Y5Q9 886 aa24.88■■□□□ 1.57
PKP3-206ENST00000528036 A0A1W2PRU2 124 aa24.87■■□□□ 1.57
PKP3-206ENST00000528036 GFRA3O60609 400 aa24.87■■□□□ 1.57
PKP3-206ENST00000528036 FAM163BP0C2L3 166 aa24.87■■□□□ 1.57
PKP3-206ENST00000528036 CMA1P23946 247 aa24.87■■□□□ 1.57
PKP3-206ENST00000528036 PSMD2Q13200 908 aa24.87■■□□□ 1.57
PKP3-206ENST00000528036 C12orf56Q8IXR9 622 aa24.87■■□□□ 1.57
PKP3-206ENST00000528036 YAF2Q8IY57 180 aa24.87■■□□□ 1.57
PKP3-206ENST00000528036 XXYLT1Q8NBI6 393 aa24.87■■□□□ 1.57
PKP3-206ENST00000528036 ZSWIM2Q8NEG5 633 aa24.87■■□□□ 1.57
PKP3-206ENST00000528036 CXorf38Q8TB03 319 aa24.87■■□□□ 1.57
PKP3-206ENST00000528036 ZSWIM3Q96MP5 696 aa24.87■■□□□ 1.57
PKP3-206ENST00000528036 PHOX2BQ99453 314 aa24.87■■□□□ 1.57
PKP3-206ENST00000528036 ATXN3LQ9H3M9 355 aa24.87■■□□□ 1.57
PKP3-206ENST00000528036 FAM170BA6NMN3 283 aa24.86■■□□□ 1.57
PKP3-206ENST00000528036 ZNF263O14978 683 aa24.86■■□□□ 1.57
PKP3-206ENST00000528036 DCNP07585 359 aaKnown RBP24.86■■□□□ 1.57
PKP3-206ENST00000528036 WNT7BP56706 349 aa24.86■■□□□ 1.57
PKP3-206ENST00000528036 RPL10AP62906 217 aaKnown RBP24.86■■□□□ 1.57
PKP3-206ENST00000528036 UBXN2BQ14CS0 331 aa24.86■■□□□ 1.57
PKP3-206ENST00000528036 SNRNP35Q16560 246 aaKnown RBP24.86■■□□□ 1.57
PKP3-206ENST00000528036 ZC3H14Q6PJT7 736 aaKnown RBP24.86■■□□□ 1.57
PKP3-206ENST00000528036 C1orf210Q8IVY1 113 aa24.86■■□□□ 1.57
PKP3-206ENST00000528036 SCFD1Q8WVM8 642 aa24.86■■□□□ 1.57
PKP3-206ENST00000528036 HPS3Q969F9 1004 aa24.86■■□□□ 1.57
PKP3-206ENST00000528036 LTB4R2Q9NPC1 389 aa24.86■■□□□ 1.57
PKP3-206ENST00000528036 DDX43Q9NXZ2 648 aaKnown RBP24.86■■□□□ 1.57
PKP3-206ENST00000528036 ABI2Q9NYB9 513 aaPredicted RBP24.86■■□□□ 1.57
PKP3-206ENST00000528036 L1RE1Q9UN81 338 aa24.86■■□□□ 1.57
PKP3-206ENST00000528036 SNX9Q9Y5X1 595 aa24.86■■□□□ 1.57
PKP3-206ENST00000528036 MYH15Q9Y2K3 1946 aa24.86■■□□□ 1.57
PKP3-206ENST00000528036 DPYSL4O14531 572 aa24.85■■□□□ 1.57
PKP3-206ENST00000528036 TGFB1I1O43294 461 aa24.85■■□□□ 1.57
PKP3-206ENST00000528036 DDX6P26196 483 aaKnown RBP eCLIP24.85■■□□□ 1.57
PKP3-206ENST00000528036 GABRR2P28476 465 aa24.85■■□□□ 1.57
PKP3-206ENST00000528036 HOXD13P35453 343 aa24.85■■□□□ 1.57
PKP3-206ENST00000528036 RPS9P46781 194 aaKnown RBP24.85■■□□□ 1.57
PKP3-206ENST00000528036 PKP1Q13835 747 aa24.85■■□□□ 1.57
PKP3-206ENST00000528036 PSMD6Q15008 389 aa24.85■■□□□ 1.57
PKP3-206ENST00000528036 MAPRE1Q15691 268 aaKnown RBP24.85■■□□□ 1.57
PKP3-206ENST00000528036 KNOP1Q1ED39 458 aaKnown RBP24.85■■□□□ 1.57
PKP3-206ENST00000528036 POTEHQ6S545 545 aa24.85■■□□□ 1.57
PKP3-206ENST00000528036 VITQ6UXI7 678 aa24.85■■□□□ 1.57
PKP3-206ENST00000528036 TPRG1Q6ZUI0 275 aa24.85■■□□□ 1.57
PKP3-206ENST00000528036 LRRTM3Q86VH5 581 aa24.85■■□□□ 1.57
PKP3-206ENST00000528036 CBWD2Q8IUF1 395 aa24.85■■□□□ 1.57
PKP3-206ENST00000528036 SPRYD3Q8NCJ5 442 aa24.85■■□□□ 1.57
PKP3-206ENST00000528036 GLIS3Q8NEA6 775 aa24.85■■□□□ 1.57
PKP3-206ENST00000528036 NKD2Q969F2 451 aaPredicted RBP24.85■■□□□ 1.57
PKP3-206ENST00000528036 FUBP3Q96I24 572 aaKnown RBP eCLIP24.85■■□□□ 1.57
PKP3-206ENST00000528036 HPDLQ96IR7 371 aa24.85■■□□□ 1.57
PKP3-206ENST00000528036 SPATA32Q96LK8 384 aa24.85■■□□□ 1.57
PKP3-206ENST00000528036 IER2Q9BTL4 223 aa24.85■■□□□ 1.57
PKP3-206ENST00000528036 FOXQ1Q9C009 403 aa24.85■■□□□ 1.57
PKP3-206ENST00000528036 TASP1Q9H6P5 420 aa24.85■■□□□ 1.57
PKP3-206ENST00000528036 ZNF334Q9HCZ1 680 aaPredicted RBP24.85■■□□□ 1.57
PKP3-206ENST00000528036 UXTQ9UBK9 157 aaPredicted RBP24.85■■□□□ 1.57
PKP3-206ENST00000528036 SIX4Q9UIU6 781 aa24.85■■□□□ 1.57
PKP3-206ENST00000528036 ANK1P16157 1881 aa24.85■■□□□ 1.57
PKP3-206ENST00000528036 HEPACAM2A8MVW5 462 aa24.84■■□□□ 1.57
PKP3-206ENST00000528036 GABRDO14764 452 aa24.84■■□□□ 1.57
PKP3-206ENST00000528036 CHADO15335 359 aa24.84■■□□□ 1.57
PKP3-206ENST00000528036 CSH1P0DML2 217 aa24.84■■□□□ 1.57
PKP3-206ENST00000528036 CSH2P0DML3 217 aa24.84■■□□□ 1.57
PKP3-206ENST00000528036 GJA1P17302 382 aa24.84■■□□□ 1.57
PKP3-206ENST00000528036 GDI1P31150 447 aa24.84■■□□□ 1.57
PKP3-206ENST00000528036 AFMP43652 599 aa24.84■■□□□ 1.57
PKP3-206ENST00000528036 INTS6LQ5JSJ4 861 aaKnown RBP24.84■■□□□ 1.57
PKP3-206ENST00000528036 GAREM2Q75VX8 874 aa24.84■■□□□ 1.57
PKP3-206ENST00000528036 ADGRF2Q8IZF7 708 aa24.84■■□□□ 1.57
PKP3-206ENST00000528036 TTC9BQ8N6N2 239 aa24.84■■□□□ 1.57
PKP3-206ENST00000528036 CLDN23Q96B33 292 aa24.84■■□□□ 1.57
PKP3-206ENST00000528036 CEP295NLQ96MC4 621 aa24.84■■□□□ 1.57
PKP3-206ENST00000528036 SCAND2PQ9GZW5 306 aaPredicted RBP24.84■■□□□ 1.57
PKP3-206ENST00000528036 BLZF1Q9H2G9 400 aa24.84■■□□□ 1.57
PKP3-206ENST00000528036 SCN1AP35498 2009 aa24.84■■□□□ 1.57
PKP3-206ENST00000528036 KIF20AO95235 890 aa24.83■■□□□ 1.57
PKP3-206ENST00000528036 TNNI1P19237 187 aa24.83■■□□□ 1.57
PKP3-206ENST00000528036 AP3M2P53677 418 aa24.83■■□□□ 1.57
PKP3-206ENST00000528036 PLCB2Q00722 1185 aa24.83■■□□□ 1.57
PKP3-206ENST00000528036 FCHO2Q0JRZ9 810 aa24.83■■□□□ 1.57
PKP3-206ENST00000528036 CUL4BQ13620 913 aa24.83■■□□□ 1.57
PKP3-206ENST00000528036 GRM2Q14416 872 aa24.83■■□□□ 1.57
PKP3-206ENST00000528036 CFAP221Q4G0U5 840 aa24.83■■□□□ 1.57
PKP3-206ENST00000528036 GPR158Q5T848 1215 aa24.83■■□□□ 1.57
PKP3-206ENST00000528036 ARID3BQ8IVW6 561 aaPredicted RBP24.83■■□□□ 1.57
PKP3-206ENST00000528036 CSGALNACT1Q8TDX6 532 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms