RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 IGSF22Q8N9C0 903 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 TMEM161BQ8NDZ6 487 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 SENP8Q96LD8 212 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 GCNAQ96QF7 691 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 LPIN3Q9BQK8 851 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 RUSC1Q9BVN2 902 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 ADAM33Q9BZ11 813 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 HAPLN2Q9GZV7 340 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 FOXP1Q9H334 677 aaPredicted RBP13.35□□□□□ -0.27
SRPRA-202ENST00000527817 EBF3Q9H4W6 596 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 POLR3BQ9NW08 1133 aaPredicted RBP13.35□□□□□ -0.27
SRPRA-202ENST00000527817 ANKFY1Q9P2R3 1169 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 TBX20Q9UMR3 447 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 DCLK1O15075 740 aa13.34□□□□□ -0.27
SRPRA-202ENST00000527817 APBB3O95704 486 aa13.34□□□□□ -0.27
SRPRA-202ENST00000527817 CYP11A1P05108 521 aa13.34□□□□□ -0.27
SRPRA-202ENST00000527817 MAPTP10636 758 aaKnown RBP13.34□□□□□ -0.27
SRPRA-202ENST00000527817 ODC1P11926 461 aa13.34□□□□□ -0.27
SRPRA-202ENST00000527817 GUCY2CP25092 1073 aa13.34□□□□□ -0.27
SRPRA-202ENST00000527817 TRAPPC10P48553 1259 aa13.34□□□□□ -0.27
SRPRA-202ENST00000527817 SMARCB1Q12824 385 aa13.34□□□□□ -0.27
SRPRA-202ENST00000527817 FOXC1Q12948 553 aa13.34□□□□□ -0.27
SRPRA-202ENST00000527817 ACAP1Q15027 740 aa13.34□□□□□ -0.27
SRPRA-202ENST00000527817 TAF12Q16514 161 aa13.34□□□□□ -0.27
SRPRA-202ENST00000527817 KYAT1Q16773 422 aa13.34□□□□□ -0.27
SRPRA-202ENST00000527817 TTC38Q5R3I4 469 aa13.34□□□□□ -0.27
SRPRA-202ENST00000527817 SPATA1Q5VX52 437 aa13.34□□□□□ -0.27
SRPRA-202ENST00000527817 C11orf74Q86VG3 221 aa13.34□□□□□ -0.27
SRPRA-202ENST00000527817 C2orf15Q8WU43 125 aaKnown RBP13.34□□□□□ -0.27
SRPRA-202ENST00000527817 GATA6Q92908 595 aa13.34□□□□□ -0.27
SRPRA-202ENST00000527817 USP13Q92995 863 aaPredicted RBP13.34□□□□□ -0.27
SRPRA-202ENST00000527817 HHIPQ96QV1 700 aa13.34□□□□□ -0.27
SRPRA-202ENST00000527817 RAB34Q9BZG1 259 aa13.34□□□□□ -0.27
SRPRA-202ENST00000527817 SMG9Q9H0W8 520 aaKnown RBP13.34□□□□□ -0.27
SRPRA-202ENST00000527817 KIF9Q9HAQ2 790 aa13.34□□□□□ -0.27
SRPRA-202ENST00000527817 TDP1Q9NUW8 608 aa13.34□□□□□ -0.27
SRPRA-202ENST00000527817 GON4LQ3T8J9 2241 aa13.33□□□□□ -0.27
SRPRA-202ENST00000527817 ASCC3Q8N3C0 2202 aaKnown RBP13.33□□□□□ -0.27
SRPRA-202ENST00000527817 LNP1A1A4G5 178 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 SRRM3A6NNA2 597 aaPredicted RBP13.33□□□□□ -0.28
SRPRA-202ENST00000527817 CDX4O14627 284 aaPredicted RBP13.33□□□□□ -0.28
SRPRA-202ENST00000527817 KHNYNO15037 678 aaKnown RBP13.33□□□□□ -0.28
SRPRA-202ENST00000527817 F11P03951 625 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 PLS3P13797 630 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 ATF6P18850 670 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 AVPR1AP37288 418 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 GUCY1B3Q02153 619 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 PPP2R3AQ06190 1150 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 DMC1Q14565 340 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 ZNF268Q14587 947 aaPredicted RBP13.33□□□□□ -0.28
SRPRA-202ENST00000527817 SLC39A12Q504Y0 691 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 TRIM68Q6AZZ1 485 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 LRSAM1Q6UWE0 723 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 TMEM150AQ86TG1 271 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 MAB21L3Q8N8X9 362 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 OR10T2Q8NGX3 314 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 SNX29Q8TEQ0 813 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 KCNN1Q92952 543 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 SEPT5Q99719 369 aaPredicted RBP13.33□□□□□ -0.28
SRPRA-202ENST00000527817 P2RY13Q9BPV8 354 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 ZCWPW1Q9H0M4 648 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 TMEM9BQ9NQ34 198 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 CCL26Q9Y258 94 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 NUP205Q92621 2012 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 WDFY3Q8IZQ1 3526 aa13.33□□□□□ -0.28
SRPRA-202ENST00000527817 PIRO00625 290 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 PPEF2O14830 753 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 HAPLN1P10915 354 aaPredicted RBP13.32□□□□□ -0.28
SRPRA-202ENST00000527817 ARSAP15289 507 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 SPINK2P20155 84 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 GJA4P35212 333 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 MATR3P43243 847 aaKnown RBP eCLIP13.32□□□□□ -0.28
SRPRA-202ENST00000527817 GUCY2FP51841 1108 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 NLRP12P59046 1061 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 BFSP1Q12934 665 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 PDGFRLQ15198 375 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 ENOX2Q16206 610 aaKnown RBP13.32□□□□□ -0.28
SRPRA-202ENST00000527817 MGAT5BQ3V5L5 792 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 USP39Q53GS9 565 aaKnown RBP13.32□□□□□ -0.28
SRPRA-202ENST00000527817 KRT79Q5XKE5 535 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 CC2D1AQ6P1N0 951 aaPredicted RBP13.32□□□□□ -0.28
SRPRA-202ENST00000527817 MON1AQ86VX9 555 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 CD302Q8IX05 232 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 KCTD17Q8N5Z5 321 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 RPLP0P6Q8NHW5 317 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 CCDC26Q8TAB7 109 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 SPPL2BQ8TCT7 592 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 GIPC2Q8TF65 315 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 ACDQ96AP0 544 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 SCNM1Q9BWG6 230 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 RPF1Q9H9Y2 349 aaKnown RBP13.32□□□□□ -0.28
SRPRA-202ENST00000527817 DSEQ9UL01 958 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 DENND4CQ5VZ89 1909 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 ZNF638Q14966 1978 aaKnown RBP13.32□□□□□ -0.28
SRPRA-202ENST00000527817 NBEAQ8NFP9 2946 aa13.32□□□□□ -0.28
SRPRA-202ENST00000527817 THADAQ6YHU6 1953 aa13.31□□□□□ -0.28
SRPRA-202ENST00000527817 ANO9A1A5B4 782 aa13.31□□□□□ -0.28
SRPRA-202ENST00000527817 H0YCG3 227 aa13.31□□□□□ -0.28
SRPRA-202ENST00000527817 OGTO15294 1046 aa13.31□□□□□ -0.28
SRPRA-202ENST00000527817 FAM189A1O60320 539 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms