RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 TRIM6Q9C030 488 aaPredicted RBP18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 VRTNQ9H8Y1 702 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 PTPN22Q9Y2R2 807 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 TCRBV5S1A1TA0A578 114 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 MYADML2A6NDP7 307 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 GOLGA8SH3BPF8 625 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 PPEF2O14830 753 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 PAEPP09466 180 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 PTGIRP43119 386 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 KCNJ1P48048 391 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 CDC42EP1Q00587 391 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 ZNF252P-AS1Q0IIN9 211 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 PTPN20Q4JDL3 420 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 DUPD1Q68J44 220 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 RHOT1Q8IXI2 618 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 CCDC105Q8IYK2 499 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 TMEM176AQ96HP8 235 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 HEMGNQ9BXL5 484 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 KLHL11Q9NVR0 708 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 TUBGCP4Q9UGJ1 667 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 IP6K2Q9UHH9 426 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 PIN4Q9Y237 131 aaKnown RBP18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 FAM187AA6NFU0 413 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 FSCN2O14926 492 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 AKAP5P24588 427 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 INHBEP58166 350 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 OGDHQ02218 1023 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 SNX17Q15036 470 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 SRLQ86TD4 932 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 C18orf25Q96B23 403 aaPredicted RBP18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 SNX27Q96L92 541 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 HEXIM2Q96MH2 286 aaKnown RBP18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 ARHGAP39Q9C0H5 1083 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 CYP3A43Q9HB55 503 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 FAM114A2Q9NRY5 505 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 PCYOX1Q9UHG3 505 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 SNX24Q9Y343 169 aa18.3■□□□□ 0.52
PCDHA6-202ENST00000527624 C17orf102A2RUQ5 167 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 PSTPIP1O43586 416 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 C6orf222P0C671 652 aaPredicted RBP18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 COILP38432 576 aaPredicted RBP18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 NDST1P52848 882 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 YARSP54577 528 aaKnown RBP18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 SNX1Q13596 522 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 CYP1B1Q16678 543 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 SGO2Q562F6 1265 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 KCTD16Q68DU8 428 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 APBB1IPQ7Z5R6 666 aaPredicted RBP18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 SH2D3CQ8N5H7 860 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 TRPV1Q8NER1 839 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 ATG4AQ8WYN0 398 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 FAXDC2Q96IV6 333 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 RASAL2Q9UJF2 1139 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 ABT1Q9ULW3 272 aaKnown RBP18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 PLAAQ9Y263 795 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 F8VP50 259 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 RECQL4O94761 1208 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 IGHA2P01877 340 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 RALAP11233 206 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 PURAQ00577 322 aaKnown RBP18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 ATP13A4Q4VNC1 1196 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 DNAJC21Q5F1R6 531 aaKnown RBP18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 NT5DC4Q86YG4 428 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 C7orf31Q8N865 590 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 LRRC45Q96CN5 670 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 CPXM1Q96SM3 734 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 LHX5Q9H2C1 402 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 PLEKHA5Q9HAU0 1116 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 RSPH14Q9UHP6 348 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 LCMT1Q9UIC8 334 aa18.29■□□□□ 0.52
PCDHA6-202ENST00000527624 GRIN2DO15399 1336 aa18.28■□□□□ 0.52
PCDHA6-202ENST00000527624 A6NNZ2 444 aa18.28■□□□□ 0.52
PCDHA6-202ENST00000527624 M0QYV0 167 aa18.28■□□□□ 0.52
PCDHA6-202ENST00000527624 MICAL2O94851 1124 aa18.28■□□□□ 0.52
PCDHA6-202ENST00000527624 AKR1A1P14550 325 aa18.28■□□□□ 0.52
PCDHA6-202ENST00000527624 MAN1A1P33908 653 aa18.28■□□□□ 0.52
PCDHA6-202ENST00000527624 HSD17B3P37058 310 aa18.28■□□□□ 0.52
PCDHA6-202ENST00000527624 GNGT1P63211 74 aa18.28■□□□□ 0.52
PCDHA6-202ENST00000527624 TUBB8Q3ZCM7 444 aa18.28■□□□□ 0.52
PCDHA6-202ENST00000527624 PPP1R15BQ5SWA1 713 aa18.28■□□□□ 0.52
PCDHA6-202ENST00000527624 C3orf20Q8ND61 904 aa18.28■□□□□ 0.52
PCDHA6-202ENST00000527624 SYNCQ9H7C4 482 aa18.28■□□□□ 0.52
PCDHA6-202ENST00000527624 KLK14Q9P0G3 267 aa18.28■□□□□ 0.52
PCDHA6-202ENST00000527624 BARX2Q9UMQ3 279 aaPredicted RBP18.28■□□□□ 0.52
PCDHA6-202ENST00000527624 RRP15Q9Y3B9 282 aaKnown RBP18.28■□□□□ 0.52
PCDHA6-202ENST00000527624 Q9Y3F1 56 aa18.28■□□□□ 0.52
PCDHA6-202ENST00000527624 CITO14578 2027 aa18.27■□□□□ 0.52
PCDHA6-202ENST00000527624 EIF3HO15372 352 aaKnown RBP eCLIP18.27■□□□□ 0.52
PCDHA6-202ENST00000527624 SREBF2Q12772 1141 aa18.27■□□□□ 0.52
PCDHA6-202ENST00000527624 MYO1EQ12965 1108 aa18.27■□□□□ 0.52
PCDHA6-202ENST00000527624 ZFYVE27Q5T4F4 411 aa18.27■□□□□ 0.52
PCDHA6-202ENST00000527624 EMC10Q5UCC4 262 aa18.27■□□□□ 0.52
PCDHA6-202ENST00000527624 LRIG3Q6UXM1 1119 aa18.27■□□□□ 0.52
PCDHA6-202ENST00000527624 ANKS1BQ7Z6G8 1248 aa18.27■□□□□ 0.52
PCDHA6-202ENST00000527624 RNF25Q96BH1 459 aaPredicted RBP18.27■□□□□ 0.52
PCDHA6-202ENST00000527624 KATNAL1Q9BW62 490 aa18.27■□□□□ 0.52
PCDHA6-202ENST00000527624 CHST7Q9NS84 486 aa18.27■□□□□ 0.52
PCDHA6-202ENST00000527624 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.27■□□□□ 0.52
PCDHA6-202ENST00000527624 SNX9Q9Y5X1 595 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms