RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 AGTPBP1Q9UPW5 1226 aa18.58■□□□□ 0.56
USH1C-205ENST00000527020 INO80B-WBP1J3KQ70 363 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 CXCL8P10145 99 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 PTPN7P35236 360 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 RAP1GAPP47736 663 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 IREB2P48200 963 aaKnown RBP18.57■□□□□ 0.56
USH1C-205ENST00000527020 ACTN3Q08043 901 aaPredicted RBP18.57■□□□□ 0.56
USH1C-205ENST00000527020 PTPN20Q4JDL3 420 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 FBXW10Q5XX13 1052 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 PIGWQ7Z7B1 504 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 ERO1BQ86YB8 467 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 CYP4X1Q8N118 509 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 DCPSQ96C86 337 aaKnown RBP18.57■□□□□ 0.56
USH1C-205ENST00000527020 INO80BQ9C086 356 aaPredicted RBP18.57■□□□□ 0.56
USH1C-205ENST00000527020 hCG_1818297A0A087WSY0 165 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 TJP3O95049 919 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 TNNC2P02585 160 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 ZSCAN5DPP0CG00 497 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 ETS1P14921 441 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 CDKN2BP42772 138 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 TAP1Q03518 808 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 PIGHQ14442 188 aaPredicted RBP18.57■□□□□ 0.56
USH1C-205ENST00000527020 EFCAB12Q6NXP0 572 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 GSTA5Q7RTV2 222 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 SULF1Q8IWU6 871 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 CNPY4Q8N129 248 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 ZCCHC9Q8N567 271 aaKnown RBP18.57■□□□□ 0.56
USH1C-205ENST00000527020 ALLCQ8N6M5 410 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 C9orf72Q96LT7 481 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 PDGFCQ9NRA1 345 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 KCNH4Q9UQ05 1017 aa18.57■□□□□ 0.56
USH1C-205ENST00000527020 SPDYE5A6NIY4 337 aa18.56■□□□□ 0.56
USH1C-205ENST00000527020 C3orf70A6NLC5 250 aaPredicted RBP18.56■□□□□ 0.56
USH1C-205ENST00000527020 CXCL11O14625 94 aa18.56■□□□□ 0.56
USH1C-205ENST00000527020 ASAP2O43150 1006 aa18.56■□□□□ 0.56
USH1C-205ENST00000527020 CETN2P41208 172 aa18.56■□□□□ 0.56
USH1C-205ENST00000527020 IFNAR2P48551 515 aa18.56■□□□□ 0.56
USH1C-205ENST00000527020 COPS2P61201 443 aa18.56■□□□□ 0.56
USH1C-205ENST00000527020 OASLQ15646 514 aaKnown RBP18.56■□□□□ 0.56
USH1C-205ENST00000527020 EAPPQ56P03 285 aaPredicted RBP18.56■□□□□ 0.56
USH1C-205ENST00000527020 CCDC121Q6ZUS5 278 aa18.56■□□□□ 0.56
USH1C-205ENST00000527020 ARFGAP1Q8N6T3 406 aa18.56■□□□□ 0.56
USH1C-205ENST00000527020 ANKRD36BP1Q96IX9 119 aa18.56■□□□□ 0.56
USH1C-205ENST00000527020 MMP19Q99542 508 aa18.56■□□□□ 0.56
USH1C-205ENST00000527020 MPHOSPH6Q99547 160 aaKnown RBP18.56■□□□□ 0.56
USH1C-205ENST00000527020 BCO2Q9BYV7 579 aa18.56■□□□□ 0.56
USH1C-205ENST00000527020 SDCBP2Q9H190 292 aa18.56■□□□□ 0.56
USH1C-205ENST00000527020 EURLQ9NYK6 297 aa18.56■□□□□ 0.56
USH1C-205ENST00000527020 NXF1Q9UBU9 619 aaKnown RBP18.56■□□□□ 0.56
USH1C-205ENST00000527020 LGALS13Q9UHV8 139 aa18.56■□□□□ 0.56
USH1C-205ENST00000527020 TNFSF13BQ9Y275 285 aa18.56■□□□□ 0.56
USH1C-205ENST00000527020 GPR25O00155 361 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 DNM1LO00429 736 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 DNALI1O14645 258 aaPredicted RBP18.55■□□□□ 0.56
USH1C-205ENST00000527020 NFICP08651 508 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 RFC1P35251 1148 aaPredicted RBP18.55■□□□□ 0.56
USH1C-205ENST00000527020 LMNB2Q03252 620 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 TFDP1Q14186 410 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 ZFYVE27Q5T4F4 411 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 CCDC13Q8IYE1 715 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 CCT6BQ92526 530 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 RNPEPQ9H4A4 650 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 SMARCAD1Q9H4L7 1026 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 TMEM120BA0PK00 339 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 HBP1O60381 514 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 C22orf31O95567 290 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 TXNP10599 105 aaKnown RBP18.55■□□□□ 0.56
USH1C-205ENST00000527020 SLC26A2P50443 739 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 RAD23BP54727 409 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 CDH8P55286 799 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 MPP2Q14168 576 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 WDR72Q3MJ13 1102 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 ANKRD20A8PQ5CZ79 823 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 TFDP3Q5H9I0 405 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 C1orf127Q8N9H9 656 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 JOSD2Q8TAC2 188 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 CXorf38Q8TB03 319 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 RBM15Q96T37 977 aaKnown RBP eCLIP18.55■□□□□ 0.56
USH1C-205ENST00000527020 LHX5Q9H2C1 402 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 IFT122Q9HBG6 1241 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 ZNF148Q9UQR1 794 aa18.55■□□□□ 0.56
USH1C-205ENST00000527020 DRG1Q9Y295 367 aaKnown RBP18.55■□□□□ 0.56
USH1C-205ENST00000527020 LRRD1A4D1F6 860 aa18.54■□□□□ 0.56
USH1C-205ENST00000527020 MAGEA4P43358 317 aa18.54■□□□□ 0.56
USH1C-205ENST00000527020 LACTBP83111 547 aaPredicted RBP18.54■□□□□ 0.56
USH1C-205ENST00000527020 SLC25A11Q02978 314 aaKnown RBP18.54■□□□□ 0.56
USH1C-205ENST00000527020 KCTD2Q14681 263 aa18.54■□□□□ 0.56
USH1C-205ENST00000527020 CCDC142Q17RM4 750 aa18.54■□□□□ 0.56
USH1C-205ENST00000527020 KIAA0319LQ8IZA0 1049 aa18.54■□□□□ 0.56
USH1C-205ENST00000527020 HAUS1Q96CS2 278 aa18.54■□□□□ 0.56
USH1C-205ENST00000527020 DDX56Q9NY93 547 aaKnown RBP18.54■□□□□ 0.56
USH1C-205ENST00000527020 CEP83Q9Y592 693 aa18.54■□□□□ 0.56
USH1C-205ENST00000527020 PLXNA1Q9UIW2 1896 aa18.54■□□□□ 0.56
USH1C-205ENST00000527020 SIGLEC16A6NMB1 481 aa18.54■□□□□ 0.56
USH1C-205ENST00000527020 GOLGA8SH3BPF8 625 aa18.54■□□□□ 0.56
USH1C-205ENST00000527020 VCPP55072 806 aaKnown RBP18.54■□□□□ 0.56
USH1C-205ENST00000527020 YWHAEP62258 255 aaKnown RBP18.54■□□□□ 0.56
USH1C-205ENST00000527020 ORC1Q13415 861 aa18.54■□□□□ 0.56
USH1C-205ENST00000527020 LRRC14Q15048 493 aa18.54■□□□□ 0.56
USH1C-205ENST00000527020 LACTB2Q53H82 288 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms