RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 ABI2Q9NYB9 513 aaPredicted RBP18.26■□□□□ 0.51
CCS-203ENST00000526058 HSFX1Q9UBD0 423 aa18.26■□□□□ 0.51
CCS-203ENST00000526058 GABRDO14764 452 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 MICAL2O94851 1124 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 NR3C1P04150 777 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 ATF6P18850 670 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 AVPR2P30518 371 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 GPC5P78333 572 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 MYL7Q01449 175 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 TSPY1Q01534 308 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 CCDC142Q17RM4 750 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 MGAT5BQ3V5L5 792 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 LIMS2Q7Z4I7 341 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 DNAJB7Q7Z6W7 309 aaPredicted RBP18.25■□□□□ 0.51
CCS-203ENST00000526058 SIX5Q8N196 739 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 LEMD2Q8NC56 503 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 PARD3BQ8TEW8 1205 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 C2orf15Q8WU43 125 aaKnown RBP18.25■□□□□ 0.51
CCS-203ENST00000526058 TMEM174Q8WUU8 243 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 KBTBD7Q8WVZ9 684 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 ACBD6Q9BR61 282 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 PLA2G2FQ9BZM2 168 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 MFSD1Q9H3U5 465 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 ZNF334Q9HCZ1 680 aaPredicted RBP18.25■□□□□ 0.51
CCS-203ENST00000526058 WNT16Q9UBV4 365 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 CA14Q9ULX7 337 aa18.25■□□□□ 0.51
CCS-203ENST00000526058 ARIH1Q9Y4X5 557 aaPredicted RBP18.25■□□□□ 0.51
CCS-203ENST00000526058 KRBA1A5PL33 1030 aa18.24■□□□□ 0.51
CCS-203ENST00000526058 LRRIQ3A6PVS8 624 aaPredicted RBP18.24■□□□□ 0.51
CCS-203ENST00000526058 HAPLN1P10915 354 aaPredicted RBP18.24■□□□□ 0.51
CCS-203ENST00000526058 NPR3P17342 541 aa18.24■□□□□ 0.51
CCS-203ENST00000526058 LHX1P48742 406 aa18.24■□□□□ 0.51
CCS-203ENST00000526058 TUFMP49411 452 aaKnown RBP18.24■□□□□ 0.51
CCS-203ENST00000526058 DLG4P78352 724 aa18.24■□□□□ 0.51
CCS-203ENST00000526058 SMARCB1Q12824 385 aa18.24■□□□□ 0.51
CCS-203ENST00000526058 TEAD2Q15562 447 aa18.24■□□□□ 0.51
CCS-203ENST00000526058 INTS6LQ5JSJ4 861 aaKnown RBP18.24■□□□□ 0.51
CCS-203ENST00000526058 FAM78AQ5JUQ0 283 aa18.24■□□□□ 0.51
CCS-203ENST00000526058 TANGO2Q6ICL3 276 aa18.24■□□□□ 0.51
CCS-203ENST00000526058 FLCNQ8NFG4 579 aa18.24■□□□□ 0.51
CCS-203ENST00000526058 SHKBP1Q8TBC3 707 aa18.24■□□□□ 0.51
CCS-203ENST00000526058 FAM200AQ8TCP9 573 aa18.24■□□□□ 0.51
CCS-203ENST00000526058 SPPL2BQ8TCT7 592 aa18.24■□□□□ 0.51
CCS-203ENST00000526058 GIPC2Q8TF65 315 aa18.24■□□□□ 0.51
CCS-203ENST00000526058 PSMG2Q969U7 264 aa18.24■□□□□ 0.51
CCS-203ENST00000526058 PKMYT1Q99640 499 aa18.24■□□□□ 0.51
CCS-203ENST00000526058 PI4K2AQ9BTU6 479 aa18.24■□□□□ 0.51
CCS-203ENST00000526058 GTF3C4Q9UKN8 822 aa18.24■□□□□ 0.51
CCS-203ENST00000526058 TRAF3IP3Q9Y228 551 aa18.24■□□□□ 0.51
CCS-203ENST00000526058 ASB3Q9Y575 518 aa18.24■□□□□ 0.51
CCS-203ENST00000526058 PCDHB5Q9Y5E4 795 aa18.24■□□□□ 0.51
CCS-203ENST00000526058 A0A1W2PRU2 124 aa18.23■□□□□ 0.51
CCS-203ENST00000526058 CALUO43852 315 aaPredicted RBP18.23■□□□□ 0.51
CCS-203ENST00000526058 FCARP24071 287 aa18.23■□□□□ 0.51
CCS-203ENST00000526058 LMO2P25791 158 aa18.23■□□□□ 0.51
CCS-203ENST00000526058 MYL6P60660 151 aa18.23■□□□□ 0.51
CCS-203ENST00000526058 CLDN10P78369 228 aa18.23■□□□□ 0.51
CCS-203ENST00000526058 FAM160A1Q05DH4 1040 aa18.23■□□□□ 0.51
CCS-203ENST00000526058 TRPC3Q13507 836 aa18.23■□□□□ 0.51
CCS-203ENST00000526058 TDRD10Q5VZ19 366 aaKnown RBP18.23■□□□□ 0.51
CCS-203ENST00000526058 CEP135Q66GS9 1140 aa18.23■□□□□ 0.51
CCS-203ENST00000526058 CWF19L1Q69YN2 538 aaKnown RBP18.23■□□□□ 0.51
CCS-203ENST00000526058 DPH6Q7L8W6 267 aa18.23■□□□□ 0.51
CCS-203ENST00000526058 SMYD4Q8IYR2 804 aaPredicted RBP18.23■□□□□ 0.51
CCS-203ENST00000526058 GUF1Q8N442 669 aaKnown RBP18.23■□□□□ 0.51
CCS-203ENST00000526058 TMEM105Q8N8V8 129 aa18.23■□□□□ 0.51
CCS-203ENST00000526058 SPATA18Q8TC71 538 aa18.23■□□□□ 0.51
CCS-203ENST00000526058 ERCC4Q92889 916 aaPredicted RBP18.23■□□□□ 0.51
CCS-203ENST00000526058 MMS19Q96T76 1030 aa18.23■□□□□ 0.51
CCS-203ENST00000526058 SLC2A4RGQ9NR83 387 aa18.23■□□□□ 0.51
CCS-203ENST00000526058 MYBPHLA2RUH7 354 aa18.22■□□□□ 0.51
CCS-203ENST00000526058 PI15O43692 258 aa18.22■□□□□ 0.51
CCS-203ENST00000526058 ATP2C2O75185 946 aa18.22■□□□□ 0.51
CCS-203ENST00000526058 ECI2O75521 394 aa18.22■□□□□ 0.51
CCS-203ENST00000526058 KIF20AO95235 890 aa18.22■□□□□ 0.51
CCS-203ENST00000526058 C4BPAP04003 597 aaKnown RBP18.22■□□□□ 0.51
CCS-203ENST00000526058 GPR15P49685 360 aa18.22■□□□□ 0.51
CCS-203ENST00000526058 BIRC3Q13489 604 aa18.22■□□□□ 0.51
CCS-203ENST00000526058 NFE2Q16621 373 aaPredicted RBP18.22■□□□□ 0.51
CCS-203ENST00000526058 WDR72Q3MJ13 1102 aa18.22■□□□□ 0.51
CCS-203ENST00000526058 STXBP5Q5T5C0 1151 aa18.22■□□□□ 0.51
CCS-203ENST00000526058 ASTLQ6HA08 431 aaPredicted RBP18.22■□□□□ 0.51
CCS-203ENST00000526058 GAREM2Q75VX8 874 aa18.22■□□□□ 0.51
CCS-203ENST00000526058 ITIH5Q86UX2 942 aa18.22■□□□□ 0.51
CCS-203ENST00000526058 STKLD1Q8NE28 680 aa18.22■□□□□ 0.51
CCS-203ENST00000526058 PRSS33Q8NF86 280 aa18.22■□□□□ 0.51
CCS-203ENST00000526058 ELMO3Q96BJ8 720 aa18.22■□□□□ 0.51
CCS-203ENST00000526058 CCDC34Q96HJ3 373 aa18.22■□□□□ 0.51
CCS-203ENST00000526058 ASB16Q96NS5 453 aa18.22■□□□□ 0.51
CCS-203ENST00000526058 MRPL45Q9BRJ2 306 aaKnown RBP18.22■□□□□ 0.51
CCS-203ENST00000526058 NME7Q9Y5B8 376 aa18.22■□□□□ 0.51
CCS-203ENST00000526058 COL4A3Q01955 1670 aa18.22■□□□□ 0.51
CCS-203ENST00000526058 CACNA1HO95180 2353 aa18.22■□□□□ 0.51
CCS-203ENST00000526058 PHACTR2O75167 634 aa18.21■□□□□ 0.51
CCS-203ENST00000526058 PDGFRBP09619 1106 aa18.21■□□□□ 0.51
CCS-203ENST00000526058 WARSP23381 471 aaKnown RBP18.21■□□□□ 0.51
CCS-203ENST00000526058 CYP2F1P24903 491 aa18.21■□□□□ 0.51
CCS-203ENST00000526058 GABRR2P28476 465 aa18.21■□□□□ 0.51
CCS-203ENST00000526058 PCSK1P29120 753 aa18.21■□□□□ 0.51
CCS-203ENST00000526058 PSMC1P62191 440 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms