RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 KCNJ4P48050 445 aa5.34□□□□□ -1.55
USP48-211ENST00000526044 SLC5A3P53794 718 aa5.34□□□□□ -1.55
USP48-211ENST00000526044 GPSM2P81274 684 aa5.34□□□□□ -1.55
USP48-211ENST00000526044 SRSF2Q01130 221 aaKnown RBP5.34□□□□□ -1.55
USP48-211ENST00000526044 DUSP2Q05923 314 aa5.34□□□□□ -1.55
USP48-211ENST00000526044 UBE4AQ14139 1066 aa5.34□□□□□ -1.55
USP48-211ENST00000526044 GORABQ5T7V8 394 aa5.34□□□□□ -1.55
USP48-211ENST00000526044 FAM180AQ6UWF9 173 aa5.34□□□□□ -1.55
USP48-211ENST00000526044 BTNL9Q6UXG8 535 aa5.34□□□□□ -1.55
USP48-211ENST00000526044 ABHD15Q6UXT9 468 aa5.34□□□□□ -1.55
USP48-211ENST00000526044 AMOTL1Q8IY63 956 aa5.34□□□□□ -1.55
USP48-211ENST00000526044 C16orf71Q8IYS4 520 aaPredicted RBP5.34□□□□□ -1.55
USP48-211ENST00000526044 ZNF808Q8N4W9 903 aaPredicted RBP5.34□□□□□ -1.55
USP48-211ENST00000526044 GLB1L3Q8NCI6 653 aaPredicted RBP5.34□□□□□ -1.55
USP48-211ENST00000526044 TSPEARQ8WU66 669 aa5.34□□□□□ -1.55
USP48-211ENST00000526044 MIEF2Q96C03 454 aa5.34□□□□□ -1.55
USP48-211ENST00000526044 ZNF512Q96ME7 567 aaPredicted RBP5.34□□□□□ -1.55
USP48-211ENST00000526044 ENKD1Q9H0I2 346 aa5.34□□□□□ -1.55
USP48-211ENST00000526044 CCDC8Q9H0W5 538 aaPredicted RBP5.34□□□□□ -1.55
USP48-211ENST00000526044 TLR9Q9NR96 1032 aa5.34□□□□□ -1.55
USP48-211ENST00000526044 CCM2LQ9NUG4 571 aaPredicted RBP5.34□□□□□ -1.55
USP48-211ENST00000526044 FPGT-TNNI3KV9GXZ4 949 aa5.34□□□□□ -1.55
USP48-211ENST00000526044 ZNF804BA4D1E1 1349 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 A0A1B0GUL7 405 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 CAPN14A8MX76 684 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 CYR61O00622 381 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 HOXA3O43365 443 aaPredicted RBP5.33□□□□□ -1.56
USP48-211ENST00000526044 MFAP3LO75121 409 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 PHF2O75151 1096 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 TMEM127O75204 238 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 CFBP00751 764 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 GASTP01350 101 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 IFIT1P09914 478 aaKnown RBP5.33□□□□□ -1.56
USP48-211ENST00000526044 SLC5A1P13866 664 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 TACR2P21452 398 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 FGFR2P21802 821 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 CASRP41180 1078 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 MTNR1BP49286 362 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 CCT2P78371 535 aaKnown RBP5.33□□□□□ -1.56
USP48-211ENST00000526044 ITKQ08881 620 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 PUM3Q15397 648 aaKnown RBP5.33□□□□□ -1.56
USP48-211ENST00000526044 ELAVL1Q15717 326 aaKnown RBP5.33□□□□□ -1.56
USP48-211ENST00000526044 ADRM1Q16186 407 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 ATP2B3Q16720 1220 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 INAVAQ3KP66 663 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 CAVIN4Q5BKX8 364 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 MUM1L1Q5H9M0 696 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 CCDC158Q5M9N0 1113 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 SYDE2Q5VT97 1194 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 SPTY2D1Q68D10 685 aaPredicted RBP5.33□□□□□ -1.56
USP48-211ENST00000526044 PGM2L1Q6PCE3 622 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 AACSQ86V21 672 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 GSPT2Q8IYD1 628 aaKnown RBP5.33□□□□□ -1.56
USP48-211ENST00000526044 VGLL2Q8N8G2 317 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 SUPT20HQ8NEM7 779 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 GPR156Q8NFN8 814 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 TBC1D16Q8TBP0 767 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 LPIN2Q92539 896 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 EYA3Q99504 573 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 ACE2Q9BYF1 805 aaPredicted RBP5.33□□□□□ -1.56
USP48-211ENST00000526044 SLITRK6Q9H5Y7 841 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 HECAQ9UBI9 543 aaPredicted RBP5.33□□□□□ -1.56
USP48-211ENST00000526044 ZBTB21Q9ULJ3 1066 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 DLEC1Q9Y238 1755 aa5.33□□□□□ -1.56
USP48-211ENST00000526044 COL11A2P13942 1736 aaPredicted RBP5.32□□□□□ -1.56
USP48-211ENST00000526044 TRIM75PA6NK02 468 aa5.32□□□□□ -1.56
USP48-211ENST00000526044 SNAP23O00161 211 aa5.32□□□□□ -1.56
USP48-211ENST00000526044 AKR1B10O60218 316 aa5.32□□□□□ -1.56
USP48-211ENST00000526044 UFL1O94874 794 aa5.32□□□□□ -1.56
USP48-211ENST00000526044 GZMKP49863 264 aa5.32□□□□□ -1.56
USP48-211ENST00000526044 MRPL49Q13405 166 aaKnown RBP5.32□□□□□ -1.56
USP48-211ENST00000526044 MTMR1Q13613 665 aa5.32□□□□□ -1.56
USP48-211ENST00000526044 CCDC93Q567U6 631 aa5.32□□□□□ -1.56
USP48-211ENST00000526044 SPDYAQ5MJ70 313 aa5.32□□□□□ -1.56
USP48-211ENST00000526044 GJC2Q5T442 439 aaPredicted RBP5.32□□□□□ -1.56
USP48-211ENST00000526044 OLFM4Q6UX06 510 aa5.32□□□□□ -1.56
USP48-211ENST00000526044 SH3RF3Q8TEJ3 882 aaPredicted RBP5.32□□□□□ -1.56
USP48-211ENST00000526044 RIN2Q8WYP3 895 aaPredicted RBP5.32□□□□□ -1.56
USP48-211ENST00000526044 IL17RAQ96F46 866 aa5.32□□□□□ -1.56
USP48-211ENST00000526044 GPATCH3Q96I76 525 aa5.32□□□□□ -1.56
USP48-211ENST00000526044 VPS33BQ9H267 617 aa5.32□□□□□ -1.56
USP48-211ENST00000526044 EPC1Q9H2F5 836 aa5.32□□□□□ -1.56
USP48-211ENST00000526044 GNL3LQ9NVN8 582 aaKnown RBP5.32□□□□□ -1.56
USP48-211ENST00000526044 POLLQ9UGP5 575 aa5.32□□□□□ -1.56
USP48-211ENST00000526044 GIT1Q9Y2X7 761 aa5.32□□□□□ -1.56
USP48-211ENST00000526044 GPR45Q9Y5Y3 372 aa5.32□□□□□ -1.56
USP48-211ENST00000526044 KIAA1551Q9HCM1 1747 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 COL4A1P02462 1669 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 TTC41PQ6P2S7 1318 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 BRCA1P38398 1863 aaKnown RBP5.31□□□□□ -1.56
USP48-211ENST00000526044 ERC2O15083 957 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 KATNA1O75449 491 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 FRAT2O75474 233 aaPredicted RBP5.31□□□□□ -1.56
USP48-211ENST00000526044 STC2O76061 302 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 IPO13O94829 963 aaKnown RBP5.31□□□□□ -1.56
USP48-211ENST00000526044 UQCRFS1P1P0C7P4 283 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 ATP5JP18859 108 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 GNAT2P19087 354 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 MX1P20591 662 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 ADORA1P30542 326 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms