RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 FAM43BQ6ZT52 329 aaPredicted RBP7.29□□□□□ -1.24
TGFBR3-207ENST00000525962 C1orf186Q6ZWK4 172 aa7.29□□□□□ -1.24
TGFBR3-207ENST00000525962 PDZD8Q8NEN9 1154 aa7.29□□□□□ -1.24
TGFBR3-207ENST00000525962 CXorf38Q8TB03 319 aa7.29□□□□□ -1.24
TGFBR3-207ENST00000525962 NSL1Q96IY1 281 aa7.29□□□□□ -1.24
TGFBR3-207ENST00000525962 RBM41Q96IZ5 413 aaKnown RBP7.29□□□□□ -1.24
TGFBR3-207ENST00000525962 KREMEN1Q96MU8 473 aa7.29□□□□□ -1.24
TGFBR3-207ENST00000525962 APOL2Q9BQE5 337 aa7.29□□□□□ -1.24
TGFBR3-207ENST00000525962 ZNF395Q9H8N7 513 aaPredicted RBP7.29□□□□□ -1.24
TGFBR3-207ENST00000525962 TUFT1Q9NNX1 390 aa7.29□□□□□ -1.24
TGFBR3-207ENST00000525962 RNF146Q9NTX7 359 aa7.29□□□□□ -1.24
TGFBR3-207ENST00000525962 SEL1LQ9UBV2 794 aa7.29□□□□□ -1.24
TGFBR3-207ENST00000525962 ZC3H7BQ9UGR2 993 aaKnown RBP7.29□□□□□ -1.24
TGFBR3-207ENST00000525962 FBXO40Q9UH90 709 aa7.29□□□□□ -1.24
TGFBR3-207ENST00000525962 TBX20Q9UMR3 447 aa7.29□□□□□ -1.24
TGFBR3-207ENST00000525962 NFS1Q9Y697 457 aa7.29□□□□□ -1.24
TGFBR3-207ENST00000525962 A6NJR5 290 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 XPO1O14980 1071 aaKnown RBP7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 ADCY3O60266 1144 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 TPST1O60507 370 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 HSPA4LO95757 839 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 CFHP08603 1231 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 ATP4AP20648 1035 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 TNFRSF8P28908 595 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 HOXD13P35453 343 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 SREBF1P36956 1147 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 PRKCIP41743 596 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 BCAR1P56945 870 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 FMO1Q01740 532 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 NPNTQ6UXI9 565 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 ALYREFQ86V81 257 aaKnown RBP7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 FAM13CQ8NE31 585 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 TRIM11Q96F44 468 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 CENPKQ9BS16 269 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 ZNF408Q9H9D4 720 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 KIAA1586Q9HCI6 787 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 SIX2Q9NPC8 291 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 IL1RAPL1Q9NZN1 696 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 WRAP73Q9P2S5 460 aaPredicted RBP7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 HESX1Q9UBX0 185 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 PCDHB2Q9Y5E7 798 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 UNC5CO95185 931 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 PGM3O95394 542 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 HNRNPCP07910 306 aaKnown RBP eCLIP7.28□□□□□ -1.242e-6■■□□□ 12.5
TGFBR3-207ENST00000525962 GHRP10912 638 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 KCNA4P22459 653 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 CALB2P22676 271 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 ECHS1P30084 290 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 PAPOLAP51003 745 aaKnown RBP7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 PSMC5P62195 406 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 RPL10AP62906 217 aaKnown RBP7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 DDR1Q08345 913 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 ITKQ08881 620 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 FAAP100Q0VG06 881 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 ORC2Q13416 577 aaPredicted RBP7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 RASA2Q15283 850 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 CCNJLQ8IV13 435 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 CDAN1Q8IWY9 1227 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 CDKL2Q92772 493 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 MTMR12Q9C0I1 747 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 SUDS3Q9H7L9 328 aaPredicted RBP7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 KCNMB3Q9NPA1 279 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 PARVAQ9NVD7 372 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 ADA2Q9NZK5 511 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 LZTS1Q9Y250 596 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 PCDHA3Q9Y5H8 950 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 NR2E3Q9Y5X4 410 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 SCINQ9Y6U3 715 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 V9GYQ6 96 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 ATRNO75882 1429 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 CAMTA1Q9Y6Y1 1673 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 GOLGA8TH3BQL2 631 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 FCHO1O14526 889 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 CYP3A4P08684 503 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 FGRP09769 529 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 TCF4P15884 667 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 ELK3P41970 407 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 RARRES1P49788 294 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 AP2B1P63010 937 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 ZNF200P98182 395 aaPredicted RBP7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 MKRN3Q13064 507 aaKnown RBP7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 SEMA3FQ13275 785 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 KHDC1Q4VXA5 237 aaKnown RBP7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 DSTYKQ6XUX3 929 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 MAP7D3Q8IWC1 876 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 MCOLN2Q8IZK6 566 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 RNF149Q8NC42 400 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 FEZF2Q8TBJ5 459 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 STK32AQ8WU08 396 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 ATXN2LQ8WWM7 1075 aaKnown RBP7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 NLRP7Q8WX94 980 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 GRAMD1AQ96CP6 724 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 TMA16Q96EY4 203 aaKnown RBP7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 CLMNQ96JQ2 1002 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 ZNF570Q96NI8 536 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 MXRA8Q9BRK3 442 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 POLR3CQ9BUI4 534 aaPredicted RBP7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 RNPEPL1Q9HAU8 725 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 IP6K2Q9UHH9 426 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 APPL1Q9UKG1 709 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms