RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 THEM5Q8N1Q8 247 aa13.71□□□□□ -0.21
CLP1-202ENST00000525602 TOP6BLQ8N6T0 577 aa13.71□□□□□ -0.21
CLP1-202ENST00000525602 ZNF516Q92618 1163 aa13.71□□□□□ -0.21
CLP1-202ENST00000525602 NKD2Q969F2 451 aaPredicted RBP13.71□□□□□ -0.21
CLP1-202ENST00000525602 SMARCE1Q969G3 411 aa13.71□□□□□ -0.21
CLP1-202ENST00000525602 HPDLQ96IR7 371 aa13.71□□□□□ -0.21
CLP1-202ENST00000525602 GSDMAQ96QA5 445 aa13.71□□□□□ -0.21
CLP1-202ENST00000525602 CRISPLD1Q9H336 500 aa13.71□□□□□ -0.21
CLP1-202ENST00000525602 DNMT3BQ9UBC3 853 aaKnown RBP13.71□□□□□ -0.21
CLP1-202ENST00000525602 HOOK1Q9UJC3 728 aaKnown RBP13.71□□□□□ -0.21
CLP1-202ENST00000525602 FBXL21Q9UKT6 434 aa13.71□□□□□ -0.21
CLP1-202ENST00000525602 DUSP12Q9UNI6 340 aa13.71□□□□□ -0.21
CLP1-202ENST00000525602 YIPF1Q9Y548 306 aa13.71□□□□□ -0.21
CLP1-202ENST00000525602 SNX9Q9Y5X1 595 aa13.71□□□□□ -0.21
CLP1-202ENST00000525602 RHOP08100 348 aa13.71□□□□□ -0.22
CLP1-202ENST00000525602 CFHP08603 1231 aa13.71□□□□□ -0.22
CLP1-202ENST00000525602 NR2F2P24468 414 aa13.71□□□□□ -0.22
CLP1-202ENST00000525602 CLDN10P78369 228 aa13.71□□□□□ -0.22
CLP1-202ENST00000525602 DUSP4Q13115 394 aa13.71□□□□□ -0.22
CLP1-202ENST00000525602 TDGQ13569 410 aa13.71□□□□□ -0.22
CLP1-202ENST00000525602 SLC39A12Q504Y0 691 aa13.71□□□□□ -0.22
CLP1-202ENST00000525602 ZNF658Q5TYW1 1059 aaPredicted RBP13.71□□□□□ -0.22
CLP1-202ENST00000525602 CENPPQ6IPU0 288 aa13.71□□□□□ -0.22
CLP1-202ENST00000525602 OSTM1Q86WC4 334 aa13.71□□□□□ -0.22
CLP1-202ENST00000525602 ELOA2Q8IYF1 753 aaPredicted RBP13.71□□□□□ -0.22
CLP1-202ENST00000525602 CCDC105Q8IYK2 499 aa13.71□□□□□ -0.22
CLP1-202ENST00000525602 ADGRF2Q8IZF7 708 aa13.71□□□□□ -0.22
CLP1-202ENST00000525602 ADSSL1Q8N142 457 aa13.71□□□□□ -0.22
CLP1-202ENST00000525602 TMEM86AQ8N2M4 240 aa13.71□□□□□ -0.22
CLP1-202ENST00000525602 ATAD1Q8NBU5 361 aa13.71□□□□□ -0.22
CLP1-202ENST00000525602 ITFG1Q8TB96 612 aa13.71□□□□□ -0.22
CLP1-202ENST00000525602 PARD3BQ8TEW8 1205 aa13.71□□□□□ -0.22
CLP1-202ENST00000525602 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.71□□□□□ -0.22
CLP1-202ENST00000525602 FRMD4BQ9Y2L6 1034 aa13.71□□□□□ -0.22
CLP1-202ENST00000525602 PCDHA5Q9Y5H7 936 aa13.71□□□□□ -0.22
CLP1-202ENST00000525602 SPTBN2O15020 2390 aa13.7□□□□□ -0.22
CLP1-202ENST00000525602 CACNA1IQ9P0X4 2223 aa13.7□□□□□ -0.22
CLP1-202ENST00000525602 KRBA1A5PL33 1030 aa13.7□□□□□ -0.22
CLP1-202ENST00000525602 CST3P01034 146 aaPredicted RBP13.7□□□□□ -0.22
CLP1-202ENST00000525602 PRCPP42785 496 aa13.7□□□□□ -0.22
CLP1-202ENST00000525602 PLD1Q13393 1074 aa13.7□□□□□ -0.22
CLP1-202ENST00000525602 ANGPT1Q15389 498 aa13.7□□□□□ -0.22
CLP1-202ENST00000525602 SLC5A9Q2M3M2 681 aa13.7□□□□□ -0.22
CLP1-202ENST00000525602 SOWAHAQ2M3V2 549 aa13.7□□□□□ -0.22
CLP1-202ENST00000525602 COBLL1Q53SF7 1204 aa13.7□□□□□ -0.22
CLP1-202ENST00000525602 TDRD10Q5VZ19 366 aaKnown RBP13.7□□□□□ -0.22
CLP1-202ENST00000525602 LIMS2Q7Z4I7 341 aa13.7□□□□□ -0.22
CLP1-202ENST00000525602 LRRTM3Q86VH5 581 aa13.7□□□□□ -0.22
CLP1-202ENST00000525602 ELMOD1Q8N336 334 aa13.7□□□□□ -0.22
CLP1-202ENST00000525602 TTC9BQ8N6N2 239 aa13.7□□□□□ -0.22
CLP1-202ENST00000525602 SPATA18Q8TC71 538 aa13.7□□□□□ -0.22
CLP1-202ENST00000525602 AVENQ9NQS1 362 aaPredicted RBP13.7□□□□□ -0.22
CLP1-202ENST00000525602 DDX43Q9NXZ2 648 aaKnown RBP13.7□□□□□ -0.22
CLP1-202ENST00000525602 CDH7Q9ULB5 785 aa13.7□□□□□ -0.22
CLP1-202ENST00000525602 CA14Q9ULX7 337 aa13.7□□□□□ -0.22
CLP1-202ENST00000525602 SLC27A5Q9Y2P5 690 aa13.7□□□□□ -0.22
CLP1-202ENST00000525602 GABRDO14764 452 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 MAPK13O15264 365 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 AKAP3O75969 853 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 LAMP2P13473 410 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 PTPN2P17706 415 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 AP3M2P53677 418 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 UBE2HP62256 183 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 DLG4P78352 724 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 MYL7Q01449 175 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 TSPY1Q01534 308 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 BIRC3Q13489 604 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 EDRF1Q3B7T1 1238 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 INTS6LQ5JSJ4 861 aaKnown RBP13.69□□□□□ -0.22
CLP1-202ENST00000525602 DPH6Q7L8W6 267 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 NPAS3Q8IXF0 933 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 DTWD2Q8NBA8 298 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 TMC2Q8TDI7 906 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 FGF13Q92913 245 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 ACBD6Q9BR61 282 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 CORO1BQ9BR76 489 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 XYLT2Q9H1B5 865 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 CEP72Q9P209 647 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 HSFX1Q9UBD0 423 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 MAN1B1Q9UKM7 699 aa13.69□□□□□ -0.22
CLP1-202ENST00000525602 MRPS23Q9Y3D9 190 aaKnown RBP13.69□□□□□ -0.22
CLP1-202ENST00000525602 ZFP37Q9Y6Q3 630 aaPredicted RBP13.69□□□□□ -0.22
CLP1-202ENST00000525602 FANCMQ8IYD8 2048 aa13.68□□□□□ -0.22
CLP1-202ENST00000525602 HCRTO43612 131 aa13.68□□□□□ -0.22
CLP1-202ENST00000525602 PHACTR2O75167 634 aa13.68□□□□□ -0.22
CLP1-202ENST00000525602 SOAT2O75908 522 aa13.68□□□□□ -0.22
CLP1-202ENST00000525602 STAU1O95793 577 aaKnown RBP13.68□□□□□ -0.22
CLP1-202ENST00000525602 C4BPAP04003 597 aaKnown RBP13.68□□□□□ -0.22
CLP1-202ENST00000525602 CEBPBP17676 345 aa13.68□□□□□ -0.22
CLP1-202ENST00000525602 ACAT1P24752 427 aaKnown RBP13.68□□□□□ -0.22
CLP1-202ENST00000525602 RPL13P26373 211 aaKnown RBP13.68□□□□□ -0.22
CLP1-202ENST00000525602 ATICP31939 592 aa13.68□□□□□ -0.22
CLP1-202ENST00000525602 LHX1P48742 406 aa13.68□□□□□ -0.22
CLP1-202ENST00000525602 CDR1P51861 262 aa13.68□□□□□ -0.22
CLP1-202ENST00000525602 MYL6P60660 151 aa13.68□□□□□ -0.22
CLP1-202ENST00000525602 SMARCB1Q12824 385 aa13.68□□□□□ -0.22
CLP1-202ENST00000525602 ADAM9Q13443 819 aa13.68□□□□□ -0.22
CLP1-202ENST00000525602 TRPC3Q13507 836 aa13.68□□□□□ -0.22
CLP1-202ENST00000525602 PRSS36Q5K4E3 855 aa13.68□□□□□ -0.22
CLP1-202ENST00000525602 C1orf220Q5T0J3 134 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms