RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 GPC5P78333 572 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 DLG4P78352 724 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 MYL7Q01449 175 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 TSPY1Q01534 308 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 SNW1Q13573 536 aaKnown RBP13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 TEAD2Q15562 447 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 CEP135Q66GS9 1140 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 TANGO2Q6ICL3 276 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 MTSS1LQ765P7 747 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 DNAJB7Q7Z6W7 309 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 GPIHBP1Q8IV16 184 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 SMYD4Q8IYR2 804 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 TMEM86AQ8N2M4 240 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 TOP6BLQ8N6T0 577 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 ENGASEQ8NFI3 743 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 GPR152Q8TDT2 470 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 ELMO3Q96BJ8 720 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 MMS19Q96T76 1030 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 PI4K2AQ9BTU6 479 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 LRRC3Q9BY71 257 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 ZNF334Q9HCZ1 680 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 GTF3C4Q9UKN8 822 aa13.79□□□□□ -0.2
TRAPPC4-205ENST00000525079 A0A1W2PRU2 124 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 LRRIQ3A6PVS8 624 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 ATP2C2O75185 946 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 PDGFRBP09619 1106 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 HAPLN1P10915 354 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 ATF6P18850 670 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 LMO2P25791 158 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 TUFMP49411 452 aaKnown RBP13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 GPR15P49685 360 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 EPHA5P54756 1037 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 MYL6P60660 151 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 BIRC3Q13489 604 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 TRPC3Q13507 836 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 KCNB1Q14721 858 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 INTS6LQ5JSJ4 861 aaKnown RBP13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 FAM78AQ5JUQ0 283 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 SDHAF4Q5VUM1 108 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 TMC8Q8IU68 726 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 SLC9A9Q8IVB4 645 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 STKLD1Q8NE28 680 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 SHKBP1Q8TBC3 707 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 SPPL2BQ8TCT7 592 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 PARD3BQ8TEW8 1205 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 ACBD6Q9BR61 282 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 GDE1Q9NZC3 331 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 PCDHB5Q9Y5E4 795 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 KMT2EQ8IZD2 1858 aa13.78□□□□□ -0.2
TRAPPC4-205ENST00000525079 MYBPHLA2RUH7 354 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 KRBA1A5PL33 1030 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 STK25O00506 426 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 GABRDO14764 452 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 GADD45BO75293 160 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 CLSTN1O94985 981 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 KIF20AO95235 890 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 NPR3P17342 541 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 CYP2F1P24903 491 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 LHX1P48742 406 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 PSMC1P62191 440 aaKnown RBP13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 FAM160A1Q05DH4 1040 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 VEPH1Q14D04 833 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 WDR72Q3MJ13 1102 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 STXBP5Q5T5C0 1151 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 TDRD10Q5VZ19 366 aaKnown RBP13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 DPH6Q7L8W6 267 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 ITIH5Q86UX2 942 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 GUF1Q8N442 669 aaKnown RBP13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 TMEM105Q8N8V8 129 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 LEMD2Q8NC56 503 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 C2orf15Q8WU43 125 aaKnown RBP13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 KBTBD7Q8WVZ9 684 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 PSMG2Q969U7 264 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 CCDC34Q96HJ3 373 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 PKMYT1Q99640 499 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 MRPL45Q9BRJ2 306 aaKnown RBP13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 SLITRK6Q9H5Y7 841 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 HSFX1Q9UBD0 423 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 NXF1Q9UBU9 619 aaKnown RBP13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 WNT16Q9UBV4 365 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 TRAF3IP3Q9Y228 551 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 ASB3Q9Y575 518 aa13.77□□□□□ -0.21
TRAPPC4-205ENST00000525079 PI15O43692 258 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 ECI2O75521 394 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 MICAL2O94851 1124 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 C4BPAP04003 597 aaKnown RBP13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 FCARP24071 287 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 NR2F2P24468 414 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 GABRR2P28476 465 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 VIPR2P41587 438 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 TNNC1P63316 161 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 SMARCB1Q12824 385 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 GRM2Q14416 872 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 TAF12Q16514 161 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 NFE2Q16621 373 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 DDR2Q16832 855 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 CWF19L1Q69YN2 538 aaKnown RBP13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 ISM2Q6H9L7 571 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 ASTLQ6HA08 431 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 GAREM2Q75VX8 874 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms