RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 PPP1R9BQ96SB3 815 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 RBM15Q96T37 977 aaKnown RBP eCLIP6.02□□□□□ -1.45
USP47-204ENST00000525078 AMNQ9BXJ7 453 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 TWSG1Q9GZX9 223 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 PRDM13Q9H4Q3 707 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 DERAQ9Y315 318 aa6.02□□□□□ -1.45
USP47-204ENST00000525078 A0A087WZ62 844 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 C19orf81C9J6K1 198 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 MTSS1O43312 755 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 TSPAN3O60637 253 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 GPR32O75388 356 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 BEST1O76090 585 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 GLP2RO95838 553 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 MPIG6BO95866 241 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 AMY1AP04745 511 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 CHGBP05060 677 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 CD1AP06126 327 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 LTA4HP09960 611 aaKnown RBP6.01□□□□□ -1.45
USP47-204ENST00000525078 CSH1P0DML2 217 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 CSH2P0DML3 217 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 IL11P20809 199 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 AKT1P31749 480 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 PGM1P36871 562 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 NNMTP40261 264 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 CCT4P50991 539 aaKnown RBP6.01□□□□□ -1.45
USP47-204ENST00000525078 RTP1P59025 263 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 TMF1P82094 1093 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 MXRA7P84157 204 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 SLC29A2Q14542 456 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 TBCEQ15813 527 aaPredicted RBP6.01□□□□□ -1.45
USP47-204ENST00000525078 NKPD1Q17RQ9 610 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 TRIM71Q2Q1W2 868 aaKnown RBP6.01□□□□□ -1.45
USP47-204ENST00000525078 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.01□□□□□ -1.45
USP47-204ENST00000525078 RAP1GAP2Q684P5 730 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 BICRALQ6AI39 1079 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 ABHD15Q6UXT9 468 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 BEND4Q6ZU67 534 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 KRT28Q7Z3Y7 464 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 FAM20CQ8IXL6 584 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 CARNMT1Q8N4J0 409 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 AVL9Q8NBF6 648 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 CFHR4Q92496 578 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 STAMQ92783 540 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 SPSB4Q96A44 273 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 DYDC2Q96IM9 177 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 MYRFLQ96LU7 910 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 PLVAPQ9BX97 442 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 XPO4Q9C0E2 1151 aaKnown RBP6.01□□□□□ -1.45
USP47-204ENST00000525078 TP63Q9H3D4 680 aaPredicted RBP6.01□□□□□ -1.45
USP47-204ENST00000525078 LANCL2Q9NS86 450 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 TMEM140Q9NV12 185 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 GALNT8Q9NY28 637 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 ZDHHC8Q9ULC8 765 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 CAMK2AQ9UQM7 478 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 TAF6LQ9Y6J9 622 aa6.01□□□□□ -1.45
USP47-204ENST00000525078 KRTAP9-1A8MXZ3 250 aaPredicted RBP6□□□□□ -1.45
USP47-204ENST00000525078 GOLGA6L6A8MZA4 724 aa6□□□□□ -1.45
USP47-204ENST00000525078 PTGES3LE9PB15 166 aa6□□□□□ -1.45
USP47-204ENST00000525078 H3BNC9 293 aa6□□□□□ -1.45
USP47-204ENST00000525078 SGSM2O43147 1006 aa6□□□□□ -1.45
USP47-204ENST00000525078 TGDSO95455 350 aa6□□□□□ -1.45
USP47-204ENST00000525078 MATN4O95460 622 aa6□□□□□ -1.45
USP47-204ENST00000525078 MLYCDO95822 493 aa6□□□□□ -1.45
USP47-204ENST00000525078 CNPP09543 421 aaKnown RBP6□□□□□ -1.45
USP47-204ENST00000525078 SRGAP2BP0DMP2 458 aa6□□□□□ -1.45
USP47-204ENST00000525078 CPA1P15085 419 aa6□□□□□ -1.45
USP47-204ENST00000525078 PECAM1P16284 738 aaPredicted RBP6□□□□□ -1.45
USP47-204ENST00000525078 RBM5P52756 815 aaKnown RBP eCLIP6□□□□□ -1.45
USP47-204ENST00000525078 NLRP5P59047 1200 aa6□□□□□ -1.45
USP47-204ENST00000525078 RPP30P78346 268 aaKnown RBP6□□□□□ -1.45
USP47-204ENST00000525078 PPARDQ03181 441 aa6□□□□□ -1.45
USP47-204ENST00000525078 CD69Q07108 199 aa6□□□□□ -1.45
USP47-204ENST00000525078 NSUN2Q08J23 767 aaKnown RBP eCLIP6□□□□□ -1.45
USP47-204ENST00000525078 BAK1Q16611 211 aa6□□□□□ -1.45
USP47-204ENST00000525078 DGKDQ16760 1214 aa6□□□□□ -1.45
USP47-204ENST00000525078 MST1LQ2TV78 715 aa6□□□□□ -1.45
USP47-204ENST00000525078 FAM69AQ5T7M9 428 aa6□□□□□ -1.45
USP47-204ENST00000525078 FYB2Q5VWT5 728 aa6□□□□□ -1.45
USP47-204ENST00000525078 CD276Q5ZPR3 534 aa6□□□□□ -1.45
USP47-204ENST00000525078 CASC1Q6TDU7 716 aa6□□□□□ -1.45
USP47-204ENST00000525078 KIAA0408Q6ZU52 694 aa6□□□□□ -1.45
USP47-204ENST00000525078 CEP128Q6ZU80 1094 aa6□□□□□ -1.45
USP47-204ENST00000525078 ANKS1BQ7Z6G8 1248 aa6□□□□□ -1.45
USP47-204ENST00000525078 KRT73Q86Y46 540 aa6□□□□□ -1.45
USP47-204ENST00000525078 CCDC28AQ8IWP9 274 aa6□□□□□ -1.45
USP47-204ENST00000525078 TTC39CQ8N584 583 aa6□□□□□ -1.45
USP47-204ENST00000525078 KCTD6Q8NC69 237 aa6□□□□□ -1.45
USP47-204ENST00000525078 NUP43Q8NFH3 380 aa6□□□□□ -1.45
USP47-204ENST00000525078 OR5AN1Q8NGI8 311 aa6□□□□□ -1.45
USP47-204ENST00000525078 NEDD1Q8NHV4 660 aa6□□□□□ -1.45
USP47-204ENST00000525078 SNX33Q8WV41 574 aa6□□□□□ -1.45
USP47-204ENST00000525078 TOE1Q96GM8 510 aaKnown RBP6□□□□□ -1.45
USP47-204ENST00000525078 EYA3Q99504 573 aa6□□□□□ -1.45
USP47-204ENST00000525078 NCAPGQ9BPX3 1015 aa6□□□□□ -1.45
USP47-204ENST00000525078 ITPAQ9BY32 194 aa6□□□□□ -1.45
USP47-204ENST00000525078 OR10A4Q9H209 315 aa6□□□□□ -1.45
USP47-204ENST00000525078 MAGEL2Q9UJ55 1249 aa6□□□□□ -1.45
USP47-204ENST00000525078 AJAP1Q9UKB5 411 aaPredicted RBP6□□□□□ -1.45
USP47-204ENST00000525078 ODF2LQ9ULJ1 636 aa6□□□□□ -1.45
USP47-204ENST00000525078 HSF4Q9ULV5 492 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms