RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 PI15O43692 258 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 HUS1O60921 280 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 SMARCB1Q12824 385 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 STK4Q13043 487 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 TEAD2Q15562 447 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 KNOP1Q1ED39 458 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 DUOXA2Q1HG44 320 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 FAM78AQ5JUQ0 283 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 TMEM86AQ8N2M4 240 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 KIAA0895Q8NCT3 520 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 SPATA18Q8TC71 538 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 SPPL2BQ8TCT7 592 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 ZSWIM3Q96MP5 696 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 ZNF334Q9HCZ1 680 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 TMLHEQ9NVH6 421 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 GREB1Q4ZG55 1949 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 MYL1P05976 194 aa12□□□□□ -0.49
TRAPPC4-204ENST00000524797 PRR29P0C7W0 189 aa12□□□□□ -0.49
TRAPPC4-204ENST00000524797 HAPLN1P10915 354 aaPredicted RBP12□□□□□ -0.49
TRAPPC4-204ENST00000524797 TUFMP49411 452 aaKnown RBP12□□□□□ -0.49
TRAPPC4-204ENST00000524797 CDR1P51861 262 aa12□□□□□ -0.49
TRAPPC4-204ENST00000524797 TSPY1Q01534 308 aa12□□□□□ -0.49
TRAPPC4-204ENST00000524797 PHLDB3Q6NSJ2 640 aa12□□□□□ -0.49
TRAPPC4-204ENST00000524797 DNAJB7Q7Z6W7 309 aaPredicted RBP12□□□□□ -0.49
TRAPPC4-204ENST00000524797 TOP6BLQ8N6T0 577 aa12□□□□□ -0.49
TRAPPC4-204ENST00000524797 PSMG2Q969U7 264 aa12□□□□□ -0.49
TRAPPC4-204ENST00000524797 HPDLQ96IR7 371 aa12□□□□□ -0.49
TRAPPC4-204ENST00000524797 ASB16Q96NS5 453 aa12□□□□□ -0.49
TRAPPC4-204ENST00000524797 SEPT5Q99719 369 aaPredicted RBP12□□□□□ -0.49
TRAPPC4-204ENST00000524797 LPIN3Q9BQK8 851 aa12□□□□□ -0.49
TRAPPC4-204ENST00000524797 GOLPH3LQ9H4A5 285 aa12□□□□□ -0.49
TRAPPC4-204ENST00000524797 DDX43Q9NXZ2 648 aaKnown RBP12□□□□□ -0.49
TRAPPC4-204ENST00000524797 SNX9Q9Y5X1 595 aa12□□□□□ -0.49
TRAPPC4-204ENST00000524797 RPN1P04843 607 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 ATF6P18850 670 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 RFX1P22670 979 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 ACAT1P24752 427 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 ANP32AP39687 249 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 MYL7Q01449 175 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 MYO1EQ12965 1108 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 MGAT5BQ3V5L5 792 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 INTS6LQ5JSJ4 861 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 TRAPPC11Q7Z392 1133 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 LIMS2Q7Z4I7 341 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 ITIH5Q86UX2 942 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 ADGRF2Q8IZF7 708 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 GOLGA5Q8TBA6 731 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 FAM200AQ8TCP9 573 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 SMARCD2Q92925 531 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 PKMYT1Q99640 499 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 ACBD6Q9BR61 282 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 GZF1Q9H116 711 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 GDPD2Q9HCC8 539 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 ZFP14Q9HCL3 533 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 ABI2Q9NYB9 513 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 R3HCC1Q9Y3T6 440 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 PCDHB5Q9Y5E4 795 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 PATJQ8NI35 1801 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 KIF26AQ9ULI4 1882 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 A0A1W2PRU2 124 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 STK25O00506 426 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 EXOC3O60645 756 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 PRPF40AO75400 957 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 FGF19O95750 216 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 DLATP10515 647 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 STARD6P59095 220 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 PFKPQ01813 784 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 VEPH1Q14D04 833 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 MLF2Q15773 248 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 SOWAHAQ2M3V2 549 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 CCDC105Q8IYK2 499 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 ZNF516Q92618 1163 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 CCDC127Q96BQ5 260 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 FNBP1Q96RU3 617 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 GPR88Q9GZN0 384 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 KCTD10Q9H3F6 313 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 TRPV4Q9HBA0 871 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 DMAC2Q9NW81 257 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 ANAPC1Q9H1A4 1944 aa11.99□□□□□ -0.49
TRAPPC4-204ENST00000524797 GABRDO14764 452 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 HCRTO43612 131 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 TNNI1P19237 187 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 LHX1P48742 406 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 DPYDQ12882 1025 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 SNW1Q13573 536 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 GRM2Q14416 872 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 NFE2Q16621 373 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 SLC44A4Q53GD3 710 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 KRBA2Q6ZNG9 492 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 GAREM2Q75VX8 874 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 DPH6Q7L8W6 267 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 SLC9A9Q8IVB4 645 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 DTWD2Q8NBA8 298 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 ZSCAN18Q8TBC5 510 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 PLEKHO2Q8TD55 490 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 GIPC2Q8TF65 315 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 PI4K2AQ9BTU6 479 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 IRF2BPLQ9H1B7 796 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 NCANO14594 1321 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 WARSP23381 471 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms