RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 MKRN4PQ13434 485 aaPredicted RBP8.77□□□□□ -1.01
CHD7-202ENST00000524602 SURF1Q15526 300 aa8.77□□□□□ -1.01
CHD7-202ENST00000524602 OASLQ15646 514 aaKnown RBP8.77□□□□□ -1.01
CHD7-202ENST00000524602 DCAF15Q66K64 600 aa8.77□□□□□ -1.01
CHD7-202ENST00000524602 LLGL2Q6P1M3 1020 aa8.77□□□□□ -1.01
CHD7-202ENST00000524602 DNAJC24Q6P3W2 148 aa8.77□□□□□ -1.01
CHD7-202ENST00000524602 PHLDB2Q86SQ0 1253 aa8.77□□□□□ -1.01
CHD7-202ENST00000524602 FITM2Q8N6M3 262 aa8.77□□□□□ -1.01
CHD7-202ENST00000524602 TMEM35BQ8NCS4 154 aa8.77□□□□□ -1.01
CHD7-202ENST00000524602 DENND1AQ8TEH3 1009 aa8.77□□□□□ -1.01
CHD7-202ENST00000524602 SMC6Q96SB8 1091 aa8.77□□□□□ -1.01
CHD7-202ENST00000524602 HAPLN2Q9GZV7 340 aa8.77□□□□□ -1.01
CHD7-202ENST00000524602 CYP39A1Q9NYL5 469 aa8.77□□□□□ -1.01
CHD7-202ENST00000524602 ZNF214Q9UL59 606 aaPredicted RBP8.77□□□□□ -1.01
CHD7-202ENST00000524602 DNPEPQ9ULA0 475 aa8.77□□□□□ -1.01
CHD7-202ENST00000524602 PCDHGC3Q9UN70 934 aa8.77□□□□□ -1.01
CHD7-202ENST00000524602 hCG_1818297A0A087WSY0 165 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 IGF2BP3O00425 579 aaKnown RBP eCLIP8.76□□□□□ -1.01
CHD7-202ENST00000524602 UNC5CO95185 931 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 ASS1P00966 412 aaKnown RBP8.76□□□□□ -1.01
CHD7-202ENST00000524602 CFHP08603 1231 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 EIF4BP23588 611 aaKnown RBP8.76□□□□□ -1.01
CHD7-202ENST00000524602 GCAP28676 217 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 ELF1P32519 619 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 YARSP54577 528 aaKnown RBP8.76□□□□□ -1.01
CHD7-202ENST00000524602 SETDB1Q15047 1291 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 C2CD6Q53TS8 623 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 NBPF12Q5TAG4 269 aaPredicted RBP8.76□□□□□ -1.01
CHD7-202ENST00000524602 RNASEH2BQ5TBB1 312 aaKnown RBP8.76□□□□□ -1.01
CHD7-202ENST00000524602 CGB2Q6NT52 195 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 BRSK2Q8IWQ3 736 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 SCYL3Q8IZE3 742 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 TTC13Q8NBP0 860 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 ASAP3Q8TDY4 903 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 PWWP2AQ96N64 755 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 TEX13BQ9BXU2 312 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 STRIP2Q9ULQ0 834 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 LRRIQ4A6NIV6 560 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 C19orf81C9J6K1 198 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 DCTN3O75935 186 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 ALDH5A1P51649 535 aaPredicted RBP8.76□□□□□ -1.01
CHD7-202ENST00000524602 EFNA5P52803 228 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 PDK4Q16654 411 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 PPP1R15BQ5SWA1 713 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 DAB2IPQ5VWQ8 1189 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 CYP4F22Q6NT55 531 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 MFSD7Q6UXD7 560 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 ZNF280CQ8ND82 737 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 DNERQ8NFT8 737 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 N4BP2L2Q92802 583 aaPredicted RBP8.76□□□□□ -1.01
CHD7-202ENST00000524602 TRABDQ9H4I3 376 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 PSMC3IPQ9P2W1 217 aaPredicted RBP8.76□□□□□ -1.01
CHD7-202ENST00000524602 USH1CQ9Y6N9 552 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 CENPFP49454 3210 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 LCTP09848 1927 aa8.76□□□□□ -1.01
CHD7-202ENST00000524602 IGKV6D-21A0A0A0MT36 114 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 PECAM1P16284 738 aaPredicted RBP8.75□□□□□ -1.01
CHD7-202ENST00000524602 TSHRP16473 764 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 ATF7P17544 494 aaPredicted RBP8.75□□□□□ -1.01
CHD7-202ENST00000524602 ALDH3A1P30838 453 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 PHBP35232 272 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 GJC1P36383 396 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 WDR4P57081 412 aaKnown RBP8.75□□□□□ -1.01
CHD7-202ENST00000524602 YWHAEP62258 255 aaKnown RBP8.75□□□□□ -1.01
CHD7-202ENST00000524602 RPL7AP62424 266 aaKnown RBP8.75□□□□□ -1.01
CHD7-202ENST00000524602 KCNJ2P63252 427 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 LACTBP83111 547 aaPredicted RBP8.75□□□□□ -1.01
CHD7-202ENST00000524602 GPS1Q13098 491 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 ZKSCAN8Q15776 578 aaPredicted RBP8.75□□□□□ -1.01
CHD7-202ENST00000524602 PARP6Q2NL67 630 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 PRAMEF18Q5VWM3 479 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 DCUN1D2Q6PH85 259 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 TMEM143Q96AN5 459 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 FHDC1Q9C0D6 1143 aaPredicted RBP8.75□□□□□ -1.01
CHD7-202ENST00000524602 MLXIPLQ9NP71 852 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 NOP53Q9NZM5 478 aaKnown RBP8.75□□□□□ -1.01
CHD7-202ENST00000524602 ZNF112Q9UJU3 913 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 FZD1Q9UP38 647 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 IVNS1ABPQ9Y6Y0 642 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 ZWINTO95229 277 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 FOXN2P32314 431 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 CDKN2BP42772 138 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 MSH2P43246 934 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 ZNF252P-AS1Q0IIN9 211 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 STXBP2Q15833 593 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 SGSM1Q2NKQ1 1148 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 TLDC1Q6P9B6 456 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 ECHDC2Q86YB7 292 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 RSRC1Q96IZ7 334 aaKnown RBP8.75□□□□□ -1.01
CHD7-202ENST00000524602 WNK4Q96J92 1243 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 L3MBTL3Q96JM7 780 aaPredicted RBP8.75□□□□□ -1.01
CHD7-202ENST00000524602 RMDN2Q96LZ7 410 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 ANKRD27Q96NW4 1050 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 MCEEQ96PE7 176 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 TARS2Q9BW92 718 aaKnown RBP8.75□□□□□ -1.01
CHD7-202ENST00000524602 NIF3L1Q9GZT8 377 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 ANKFY1Q9P2R3 1169 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 FBXO40Q9UH90 709 aa8.75□□□□□ -1.01
CHD7-202ENST00000524602 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.75□□□□□ -1.01
CHD7-202ENST00000524602 ADCY3O60266 1144 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms