RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 hCG_1818297A0A087WSY0 165 aa12.12□□□□□ -0.47
PTPRK-217ENST00000524534 DPPA5A6NC42 116 aa12.12□□□□□ -0.47
PTPRK-217ENST00000524534 H0Y3Z8 333 aa12.12□□□□□ -0.47
PTPRK-217ENST00000524534 TROVE2P10155 538 aaKnown RBP eCLIP12.12□□□□□ -0.47
PTPRK-217ENST00000524534 ADRA1DP25100 572 aa12.12□□□□□ -0.47
PTPRK-217ENST00000524534 SSTR3P32745 418 aaPredicted RBP12.12□□□□□ -0.47
PTPRK-217ENST00000524534 NOP14P78316 857 aaKnown RBP12.12□□□□□ -0.47
PTPRK-217ENST00000524534 ZNF252P-AS1Q0IIN9 211 aa12.12□□□□□ -0.47
PTPRK-217ENST00000524534 PGM5Q15124 567 aa12.12□□□□□ -0.47
PTPRK-217ENST00000524534 C11orf91Q3C1V1 193 aa12.12□□□□□ -0.47
PTPRK-217ENST00000524534 TMEM270Q6UE05 265 aa12.12□□□□□ -0.47
PTPRK-217ENST00000524534 RBBP8NLQ8NC74 664 aaPredicted RBP12.12□□□□□ -0.47
PTPRK-217ENST00000524534 FAM151AQ8WW52 585 aa12.12□□□□□ -0.47
PTPRK-217ENST00000524534 DNAJC9Q8WXX5 260 aa12.12□□□□□ -0.47
PTPRK-217ENST00000524534 ADAM33Q9BZ11 813 aa12.12□□□□□ -0.47
PTPRK-217ENST00000524534 PDLIM7Q9NR12 457 aa12.12□□□□□ -0.47
PTPRK-217ENST00000524534 TM9SF1O15321 606 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 BANF1O75531 89 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 STBD1O95210 358 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 TNNI1P19237 187 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 EIF2AK2P19525 551 aaKnown RBP12.11□□□□□ -0.47
PTPRK-217ENST00000524534 MMP8P22894 467 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 GLRA2P23416 452 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 RTP1P59025 263 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 LBRQ14739 615 aaKnown RBP12.11□□□□□ -0.47
PTPRK-217ENST00000524534 SGSM1Q2NKQ1 1148 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 TSNAXIP1Q2TAA8 658 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 KHDC1Q4VXA5 237 aaKnown RBP12.11□□□□□ -0.47
PTPRK-217ENST00000524534 ANKMY2Q8IV38 441 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 APLFQ8IW19 511 aaPredicted RBP12.11□□□□□ -0.47
PTPRK-217ENST00000524534 NLGN1Q8N2Q7 840 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 RDM1Q8NG50 284 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 RFWD2Q8NHY2 731 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 PTCD3Q96EY7 689 aaKnown RBP12.11□□□□□ -0.47
PTPRK-217ENST00000524534 BICD1Q96G01 975 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 CEP170P1Q96L14 293 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 FNBP1Q96RU3 617 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 TUBB6Q9BUF5 446 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 VPS11Q9H270 941 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 TMOD2Q9NZR1 351 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 ARHGAP28Q9P2N2 729 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 PTPRJQ12913 1337 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 TCRBV5S1A1TA0A578 114 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 EIF4E1BA6NMX2 242 aaKnown RBP12.11□□□□□ -0.47
PTPRK-217ENST00000524534 CCDC22O60826 627 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 PEX19P40855 299 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 TFDP1Q14186 410 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 EFTUD2Q15029 972 aaKnown RBP eCLIP12.11□□□□□ -0.47
PTPRK-217ENST00000524534 HIF1AQ16665 826 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 RFWD3Q6PCD5 774 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 PCGF5Q86SE9 256 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 BANPQ8N9N5 519 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 SLC35B2Q8TB61 432 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 ZNF333Q96JL9 665 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 BTBD10Q9BSF8 475 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 TMEM121Q9BTD3 319 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 YIPF3Q9GZM5 350 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 SPATS2LQ9NUQ6 558 aaKnown RBP12.11□□□□□ -0.47
PTPRK-217ENST00000524534 MAP3K20Q9NYL2 800 aaKnown RBP12.11□□□□□ -0.47
PTPRK-217ENST00000524534 TCEAL9Q9UHQ7 104 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 SNCAIPQ9Y6H5 919 aa12.11□□□□□ -0.47
PTPRK-217ENST00000524534 SPDYE2BA6NHP3 402 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 SIGLEC16A6NMB1 481 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 F8VP50 259 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 ZNF862O60290 1169 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 DNAJC6O75061 913 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 MYCNP04198 464 aaPredicted RBP12.1□□□□□ -0.47
PTPRK-217ENST00000524534 SPDYE6P0CI01 402 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 CALRP27797 417 aaKnown RBP12.1□□□□□ -0.47
PTPRK-217ENST00000524534 PHBP35232 272 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 CDKN2BP42772 138 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 CTCFP49711 727 aaPredicted RBP12.1□□□□□ -0.47
PTPRK-217ENST00000524534 TFDP3Q5H9I0 405 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 ZFYVE27Q5T4F4 411 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 TXNRD3NBQ6F5E7 133 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 ATP11CQ8NB49 1132 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 TCP10LQ8TDR4 215 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 ALKBH8Q96BT7 664 aaKnown RBP12.1□□□□□ -0.47
PTPRK-217ENST00000524534 FAM136AQ96C01 138 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 GJD4Q96KN9 370 aaPredicted RBP12.1□□□□□ -0.47
PTPRK-217ENST00000524534 PAFAH2Q99487 392 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 ACSS3Q9H6R3 686 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 MANSC1Q9H8J5 431 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 XPNPEP1Q9NQW7 623 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 ARL8BQ9NVJ2 186 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 STOML1Q9UBI4 398 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 DCTN4Q9UJW0 460 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 PCDHA10Q9Y5I2 948 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 STYXL1Q9Y6J8 313 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 CNTNAP1P78357 1384 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 CLRN2A0PK11 232 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 E7ESA3 106 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 GOLGA8SH3BPF8 625 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 GOLGA8MH3BSY2 632 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 SGK1O00141 431 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 PLSCR1O15162 318 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 GSC2O15499 205 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 TBC1D12O60347 775 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 NPTXRO95502 500 aa12.1□□□□□ -0.47
PTPRK-217ENST00000524534 MYCLP12524 364 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms