RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 PKMYT1Q99640 499 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 XYLT2Q9H1B5 865 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 CRISPLD1Q9H336 500 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 HCFC1R1Q9NWW0 138 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 DDX43Q9NXZ2 648 aaKnown RBP22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 CEP72Q9P209 647 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 MAPK8IP1Q9UQF2 711 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 MRPS23Q9Y3D9 190 aaKnown RBP22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 AKAP3O75969 853 aa22.4■■□□□ 1.18
TRAPPC9-215ENST00000524162 FGF19O95750 216 aa22.4■■□□□ 1.18
TRAPPC9-215ENST00000524162 WARSP23381 471 aaKnown RBP22.4■■□□□ 1.18
TRAPPC9-215ENST00000524162 PRCPP42785 496 aa22.4■■□□□ 1.18
TRAPPC9-215ENST00000524162 NTHL1P78549 312 aa22.4■■□□□ 1.18
TRAPPC9-215ENST00000524162 LRRC63Q05C16 580 aa22.4■■□□□ 1.18
TRAPPC9-215ENST00000524162 ADAM9Q13443 819 aa22.4■■□□□ 1.18
TRAPPC9-215ENST00000524162 TRPC3Q13507 836 aa22.4■■□□□ 1.18
TRAPPC9-215ENST00000524162 HTR4Q13639 388 aa22.4■■□□□ 1.18
TRAPPC9-215ENST00000524162 INTS6LQ5JSJ4 861 aaKnown RBP22.4■■□□□ 1.18
TRAPPC9-215ENST00000524162 TDRD10Q5VZ19 366 aaKnown RBP22.4■■□□□ 1.18
TRAPPC9-215ENST00000524162 CEP135Q66GS9 1140 aa22.4■■□□□ 1.18
TRAPPC9-215ENST00000524162 ITIH5Q86UX2 942 aa22.4■■□□□ 1.18
TRAPPC9-215ENST00000524162 LRRTM3Q86VH5 581 aa22.4■■□□□ 1.18
TRAPPC9-215ENST00000524162 ZC3H3Q8IXZ2 948 aaKnown RBP22.4■■□□□ 1.18
TRAPPC9-215ENST00000524162 ATAD1Q8NBU5 361 aa22.4■■□□□ 1.18
TRAPPC9-215ENST00000524162 FUBP3Q96I24 572 aaKnown RBP eCLIP22.4■■□□□ 1.18
TRAPPC9-215ENST00000524162 PGLYRP2Q96PD5 576 aa22.4■■□□□ 1.18
TRAPPC9-215ENST00000524162 DUSP12Q9UNI6 340 aa22.4■■□□□ 1.18
TRAPPC9-215ENST00000524162 PCDHB5Q9Y5E4 795 aa22.4■■□□□ 1.18
TRAPPC9-215ENST00000524162 GADD45BO75293 160 aaPredicted RBP22.39■■□□□ 1.17
TRAPPC9-215ENST00000524162 MAPRE1Q15691 268 aaKnown RBP22.39■■□□□ 1.17
TRAPPC9-215ENST00000524162 CFAP221Q4G0U5 840 aa22.39■■□□□ 1.17
TRAPPC9-215ENST00000524162 FAM171BQ6P995 826 aa22.39■■□□□ 1.17
TRAPPC9-215ENST00000524162 NPAS3Q8IXF0 933 aa22.39■■□□□ 1.17
TRAPPC9-215ENST00000524162 ADSSL1Q8N142 457 aa22.39■■□□□ 1.17
TRAPPC9-215ENST00000524162 KBTBD7Q8WVZ9 684 aa22.39■■□□□ 1.17
TRAPPC9-215ENST00000524162 PSMG2Q969U7 264 aa22.39■■□□□ 1.17
TRAPPC9-215ENST00000524162 ASIC4Q96FT7 647 aa22.39■■□□□ 1.17
TRAPPC9-215ENST00000524162 CEP295NLQ96MC4 621 aa22.39■■□□□ 1.17
TRAPPC9-215ENST00000524162 GPR88Q9GZN0 384 aa22.39■■□□□ 1.17
TRAPPC9-215ENST00000524162 DNAJC25Q9H1X3 360 aa22.39■■□□□ 1.17
TRAPPC9-215ENST00000524162 ASAH2Q9NR71 780 aa22.39■■□□□ 1.17
TRAPPC9-215ENST00000524162 CDH9Q9ULB4 789 aa22.39■■□□□ 1.17
TRAPPC9-215ENST00000524162 TULP1O00294 542 aaPredicted RBP22.38■■□□□ 1.17
TRAPPC9-215ENST00000524162 ASGR2P07307 311 aa22.38■■□□□ 1.17
TRAPPC9-215ENST00000524162 GTF2H1P32780 548 aa22.38■■□□□ 1.17
TRAPPC9-215ENST00000524162 VAMP7P51809 220 aa22.38■■□□□ 1.17
TRAPPC9-215ENST00000524162 STIM1Q13586 685 aa22.38■■□□□ 1.17
TRAPPC9-215ENST00000524162 NCOA4Q13772 614 aa22.38■■□□□ 1.17
TRAPPC9-215ENST00000524162 WDR72Q3MJ13 1102 aa22.38■■□□□ 1.17
TRAPPC9-215ENST00000524162 PDZD4Q76G19 769 aaPredicted RBP22.38■■□□□ 1.17
TRAPPC9-215ENST00000524162 FAM186BQ8IYM0 893 aa22.38■■□□□ 1.17
TRAPPC9-215ENST00000524162 ITFG1Q8TB96 612 aa22.38■■□□□ 1.17
TRAPPC9-215ENST00000524162 DHTKD1Q96HY7 919 aaPredicted RBP22.38■■□□□ 1.17
TRAPPC9-215ENST00000524162 CORO1BQ9BR76 489 aa22.38■■□□□ 1.17
TRAPPC9-215ENST00000524162 LRRC3Q9BY71 257 aa22.38■■□□□ 1.17
TRAPPC9-215ENST00000524162 ARIH1Q9Y4X5 557 aaPredicted RBP22.38■■□□□ 1.17
TRAPPC9-215ENST00000524162 TMEM221A6NGB7 291 aa22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 M0R296 226 aa22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 CETN3O15182 167 aa22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 PHACTR2O75167 634 aa22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 HAPLN1P10915 354 aaPredicted RBP22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 KRT13P13646 458 aa22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 MYL6P60660 151 aa22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 TNNC1P63316 161 aa22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 DLG4P78352 724 aa22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 FKBP3Q00688 224 aaKnown RBP22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 BIRC3Q13489 604 aa22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 SLC5A9Q2M3M2 681 aa22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 SGSM1Q2NKQ1 1148 aa22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 C1orf220Q5T0J3 134 aa22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 SV2AQ7L0J3 742 aa22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 SMYD4Q8IYR2 804 aaPredicted RBP22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 SLC44A3Q8N4M1 653 aa22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 FAXDC2Q96IV6 333 aa22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 TSG101Q99816 390 aa22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 ZMYM5Q9UJ78 669 aa22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 SLC27A5Q9Y2P5 690 aa22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 GREB1Q4ZG55 1949 aa22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 MUC6Q6W4X9 2439 aa22.37■■□□□ 1.17
TRAPPC9-215ENST00000524162 PSMA7O14818 248 aa22.36■■□□□ 1.17
TRAPPC9-215ENST00000524162 SLC16A3O15427 465 aaKnown RBP22.36■■□□□ 1.17
TRAPPC9-215ENST00000524162 VEPH1Q14D04 833 aa22.36■■□□□ 1.17
TRAPPC9-215ENST00000524162 DNAJB7Q7Z6W7 309 aaPredicted RBP22.36■■□□□ 1.17
TRAPPC9-215ENST00000524162 OSTM1Q86WC4 334 aa22.36■■□□□ 1.17
TRAPPC9-215ENST00000524162 TMC8Q8IU68 726 aa22.36■■□□□ 1.17
TRAPPC9-215ENST00000524162 TRIML1Q8N9V2 468 aa22.36■■□□□ 1.17
TRAPPC9-215ENST00000524162 MMS19Q96T76 1030 aa22.36■■□□□ 1.17
TRAPPC9-215ENST00000524162 SOBPA7XYQ1 873 aa22.35■■□□□ 1.17
TRAPPC9-215ENST00000524162 VNN1O95497 513 aa22.35■■□□□ 1.17
TRAPPC9-215ENST00000524162 ASS1P00966 412 aaKnown RBP22.35■■□□□ 1.17
TRAPPC9-215ENST00000524162 SRFP11831 508 aa22.35■■□□□ 1.17
TRAPPC9-215ENST00000524162 P4HA1P13674 534 aa22.35■■□□□ 1.17
TRAPPC9-215ENST00000524162 CCNE1P24864 410 aa22.35■■□□□ 1.17
TRAPPC9-215ENST00000524162 MAGEA11P43364 429 aa22.35■■□□□ 1.17
TRAPPC9-215ENST00000524162 MORC3Q14149 939 aa22.35■■□□□ 1.17
TRAPPC9-215ENST00000524162 ZNF699Q32M78 642 aa22.35■■□□□ 1.17
TRAPPC9-215ENST00000524162 MGAT5BQ3V5L5 792 aa22.35■■□□□ 1.17
TRAPPC9-215ENST00000524162 ZNF667Q5HYK9 610 aa22.35■■□□□ 1.17
TRAPPC9-215ENST00000524162 C4orf50Q6ZRC1 276 aa22.35■■□□□ 1.17
TRAPPC9-215ENST00000524162 TTC9BQ8N6N2 239 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms