RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 POLR2BP30876 1174 aaKnown RBP20.26■□□□□ 0.83
PTP4A3-206ENST00000524028 STAT6P42226 847 aa20.26■□□□□ 0.83
PTP4A3-206ENST00000524028 TFAMQ00059 246 aaKnown RBP20.26■□□□□ 0.83
PTP4A3-206ENST00000524028 FOXK2Q01167 660 aa20.26■□□□□ 0.83
PTP4A3-206ENST00000524028 GAS6Q14393 721 aa20.26■□□□□ 0.83
PTP4A3-206ENST00000524028 SV2CQ496J9 727 aa20.26■□□□□ 0.83
PTP4A3-206ENST00000524028 CCDC73Q6ZRK6 1079 aa20.26■□□□□ 0.83
PTP4A3-206ENST00000524028 BRSK2Q8IWQ3 736 aa20.26■□□□□ 0.83
PTP4A3-206ENST00000524028 C1orf127Q8N9H9 656 aa20.26■□□□□ 0.83
PTP4A3-206ENST00000524028 TTC8Q8TAM2 541 aa20.26■□□□□ 0.83
PTP4A3-206ENST00000524028 CSGALNACT1Q8TDX6 532 aa20.26■□□□□ 0.83
PTP4A3-206ENST00000524028 C2orf15Q8WU43 125 aaKnown RBP20.26■□□□□ 0.83
PTP4A3-206ENST00000524028 INTS4Q96HW7 963 aaKnown RBP20.26■□□□□ 0.83
PTP4A3-206ENST00000524028 CBWD1Q9BRT8 395 aa20.26■□□□□ 0.83
PTP4A3-206ENST00000524028 SMG9Q9H0W8 520 aaKnown RBP20.26■□□□□ 0.83
PTP4A3-206ENST00000524028 TASP1Q9H6P5 420 aa20.26■□□□□ 0.83
PTP4A3-206ENST00000524028 PANK4Q9NVE7 773 aa20.26■□□□□ 0.83
PTP4A3-206ENST00000524028 ABI2Q9NYB9 513 aaPredicted RBP20.26■□□□□ 0.83
PTP4A3-206ENST00000524028 PCDHB13Q9Y5F0 798 aa20.26■□□□□ 0.83
PTP4A3-206ENST00000524028 DMXL1Q9Y485 3027 aa20.25■□□□□ 0.83
PTP4A3-206ENST00000524028 ITGB3P05106 788 aa20.25■□□□□ 0.83
PTP4A3-206ENST00000524028 GARTP22102 1010 aa20.25■□□□□ 0.83
PTP4A3-206ENST00000524028 WEE1P30291 646 aa20.25■□□□□ 0.83
PTP4A3-206ENST00000524028 VEPH1Q14D04 833 aa20.25■□□□□ 0.83
PTP4A3-206ENST00000524028 ARHGAP15Q53QZ3 475 aa20.25■□□□□ 0.83
PTP4A3-206ENST00000524028 TXNDC11Q6PKC3 985 aa20.25■□□□□ 0.83
PTP4A3-206ENST00000524028 ERMP1Q7Z2K6 904 aa20.25■□□□□ 0.83
PTP4A3-206ENST00000524028 TMEM150AQ86TG1 271 aa20.25■□□□□ 0.83
PTP4A3-206ENST00000524028 SPPL2BQ8TCT7 592 aa20.25■□□□□ 0.83
PTP4A3-206ENST00000524028 SLC46A2Q9BY10 475 aa20.25■□□□□ 0.83
PTP4A3-206ENST00000524028 EPC1Q9H2F5 836 aa20.25■□□□□ 0.83
PTP4A3-206ENST00000524028 PCIF1Q9H4Z3 704 aa20.25■□□□□ 0.83
PTP4A3-206ENST00000524028 RBM12Q9NTZ6 932 aaKnown RBP20.25■□□□□ 0.83
PTP4A3-206ENST00000524028 OBP2AQ9NY56 170 aa20.25■□□□□ 0.83
PTP4A3-206ENST00000524028 RBAKQ9NYW8 714 aaPredicted RBP20.25■□□□□ 0.83
PTP4A3-206ENST00000524028 GTSE1Q9NYZ3 720 aa20.25■□□□□ 0.83
PTP4A3-206ENST00000524028 AGAP1Q9UPQ3 857 aa20.25■□□□□ 0.83
PTP4A3-206ENST00000524028 DPYSL4O14531 572 aa20.24■□□□□ 0.83
PTP4A3-206ENST00000524028 PRPF6O94906 941 aaKnown RBP20.24■□□□□ 0.83
PTP4A3-206ENST00000524028 HMGA1P17096 107 aaKnown RBP20.24■□□□□ 0.83
PTP4A3-206ENST00000524028 GPR15P49685 360 aa20.24■□□□□ 0.83
PTP4A3-206ENST00000524028 KPNA1P52294 538 aaPredicted RBP20.24■□□□□ 0.83
PTP4A3-206ENST00000524028 SMARCB1Q12824 385 aa20.24■□□□□ 0.83
PTP4A3-206ENST00000524028 DCP1BQ8IZD4 617 aaKnown RBP20.24■□□□□ 0.83
PTP4A3-206ENST00000524028 SYCP3Q8IZU3 236 aa20.24■□□□□ 0.83
PTP4A3-206ENST00000524028 PDCL2Q8N4E4 241 aa20.24■□□□□ 0.83
PTP4A3-206ENST00000524028 PDILTQ8N807 584 aa20.24■□□□□ 0.83
PTP4A3-206ENST00000524028 STKLD1Q8NE28 680 aa20.24■□□□□ 0.83
PTP4A3-206ENST00000524028 GLIS3Q8NEA6 775 aa20.24■□□□□ 0.83
PTP4A3-206ENST00000524028 ZNF560Q96MR9 790 aa20.24■□□□□ 0.83
PTP4A3-206ENST00000524028 C8orf33Q9H7E9 229 aaPredicted RBP20.24■□□□□ 0.83
PTP4A3-206ENST00000524028 L1RE1Q9UN81 338 aa20.24■□□□□ 0.83
PTP4A3-206ENST00000524028 SMG5Q9UPR3 1016 aaKnown RBP20.24■□□□□ 0.83
PTP4A3-206ENST00000524028 MYBPHLA2RUH7 354 aa20.23■□□□□ 0.83
PTP4A3-206ENST00000524028 SPECC1L-ADORA2AF8WAN1 911 aa20.23■□□□□ 0.83
PTP4A3-206ENST00000524028 LDHAP00338 332 aaKnown RBP20.23■□□□□ 0.83
PTP4A3-206ENST00000524028 CDC25CP30307 473 aa20.23■□□□□ 0.83
PTP4A3-206ENST00000524028 PNPLA4P41247 253 aa20.23■□□□□ 0.83
PTP4A3-206ENST00000524028 NASPP49321 788 aaPredicted RBP20.23■□□□□ 0.83
PTP4A3-206ENST00000524028 SATB1Q01826 763 aa20.23■□□□□ 0.83
PTP4A3-206ENST00000524028 TNK2Q07912 1038 aa20.23■□□□□ 0.83
PTP4A3-206ENST00000524028 ARHGAP29Q52LW3 1261 aa20.23■□□□□ 0.83
PTP4A3-206ENST00000524028 CSGALNACT2Q8N6G5 542 aa20.23■□□□□ 0.83
PTP4A3-206ENST00000524028 HPS3Q969F9 1004 aa20.23■□□□□ 0.83
PTP4A3-206ENST00000524028 IER2Q9BTL4 223 aa20.23■□□□□ 0.83
PTP4A3-206ENST00000524028 PI4K2AQ9BTU6 479 aa20.23■□□□□ 0.83
PTP4A3-206ENST00000524028 FAM126AQ9BYI3 521 aaPredicted RBP20.23■□□□□ 0.83
PTP4A3-206ENST00000524028 PDE11AQ9HCR9 933 aa20.23■□□□□ 0.83
PTP4A3-206ENST00000524028 SIX4Q9UIU6 781 aa20.23■□□□□ 0.83
PTP4A3-206ENST00000524028 PCDHB5Q9Y5E4 795 aa20.23■□□□□ 0.83
PTP4A3-206ENST00000524028 STX6O43752 255 aa20.22■□□□□ 0.83
PTP4A3-206ENST00000524028 EXTL3O43909 919 aa20.22■□□□□ 0.83
PTP4A3-206ENST00000524028 F11P03951 625 aa20.22■□□□□ 0.83
PTP4A3-206ENST00000524028 ACAT1P24752 427 aaKnown RBP20.22■□□□□ 0.83
PTP4A3-206ENST00000524028 CTHP32929 405 aa20.22■□□□□ 0.83
PTP4A3-206ENST00000524028 CCR3P51677 355 aa20.22■□□□□ 0.83
PTP4A3-206ENST00000524028 ALCAMQ13740 583 aa20.22■□□□□ 0.83
PTP4A3-206ENST00000524028 TAF12Q16514 161 aa20.22■□□□□ 0.83
PTP4A3-206ENST00000524028 CCDC142Q17RM4 750 aa20.22■□□□□ 0.83
PTP4A3-206ENST00000524028 SDHAF4Q5VUM1 108 aa20.22■□□□□ 0.83
PTP4A3-206ENST00000524028 LINC00301Q8NCQ3 95 aa20.22■□□□□ 0.83
PTP4A3-206ENST00000524028 BPIFB1Q8TDL5 484 aa20.22■□□□□ 0.83
PTP4A3-206ENST00000524028 CACTINQ8WUQ7 758 aaKnown RBP20.22■□□□□ 0.83
PTP4A3-206ENST00000524028 MSANTD3Q96H12 275 aa20.22■□□□□ 0.83
PTP4A3-206ENST00000524028 PKMYT1Q99640 499 aa20.22■□□□□ 0.83
PTP4A3-206ENST00000524028 ZSCAN16Q9H4T2 348 aaPredicted RBP20.22■□□□□ 0.83
PTP4A3-206ENST00000524028 NCDNQ9UBB6 729 aa20.22■□□□□ 0.83
PTP4A3-206ENST00000524028 CACNA1AO00555 2505 aa20.22■□□□□ 0.83
PTP4A3-206ENST00000524028 HCRTO43612 131 aa20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 PRPF40AO75400 957 aaKnown RBP20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 CXCL12P48061 93 aa20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 NLRP12P59046 1061 aa20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 DMWDQ09019 674 aa20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 BFSP1Q12934 665 aa20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 LMBRD2Q68DH5 695 aaPredicted RBP20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 Q6ZS52 159 aa20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 OSTM1Q86WC4 334 aa20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 RALGPS2Q86X27 583 aaPredicted RBP20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 CMTM8Q8IZV2 173 aa20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 LRRC52Q8N7C0 313 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms