RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 CALCAP01258 141 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 MAPK7Q13164 816 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 TSNAXIP1Q2TAA8 658 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 MMEL1Q495T6 779 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 PRAMEF19Q5SWL8 479 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 MEI1Q5TIA1 1274 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 ANO5Q75V66 913 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 ABRAQ8N0Z2 381 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 TRIM62Q9BVG3 475 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 GPATCH2LQ9NWQ4 482 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 ABI2Q9NYB9 513 aaPredicted RBP13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 TPX2Q9ULW0 747 aaKnown RBP13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 ANGPTL3Q9Y5C1 460 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 PLA2G6O60733 806 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 AP1G2O75843 785 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 PRLRP16471 622 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 KPNA2P52292 529 aaKnown RBP13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 STAT4Q14765 748 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 CLEC16AQ2KHT3 1053 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 MGAT5BQ3V5L5 792 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 EFHC1Q5JVL4 640 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 TLR10Q9BXR5 811 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 TJP2Q9UDY2 1190 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 EEF2KO00418 725 aaKnown RBP13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 CYB561D2O14569 222 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 GTF2BQ00403 316 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 BIRC2Q13490 618 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 CELF3Q5SZQ8 465 aaKnown RBP13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 HIBCHQ6NVY1 386 aaPredicted RBP13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 NOP9Q86U38 636 aaKnown RBP13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 FAM71DQ8N9W8 422 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 ALG13Q9NP73 1137 aaKnown RBP13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 DCTN4Q9UJW0 460 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 CCDC195A0A1B0GUA6 201 aa13.71□□□□□ -0.22
PCDHGB1-201ENST00000523390 NKRFO15226 690 aaKnown RBP eCLIP13.71□□□□□ -0.22
PCDHGB1-201ENST00000523390 PAMP19021 973 aa13.71□□□□□ -0.22
PCDHGB1-201ENST00000523390 FAXCQ5TGI0 409 aa13.71□□□□□ -0.22
PCDHGB1-201ENST00000523390 SRLQ86TD4 932 aa13.71□□□□□ -0.22
PCDHGB1-201ENST00000523390 L3MBTL3Q96JM7 780 aaPredicted RBP13.71□□□□□ -0.22
PCDHGB1-201ENST00000523390 TGFB1I1O43294 461 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 GCNT1Q02742 428 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 ATG16L1Q676U5 607 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 WDR59Q6PJI9 974 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 TMEM176AQ96HP8 235 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 ZNF512Q96ME7 567 aaPredicted RBP13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 TINF2Q9BSI4 451 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 KCTD10Q9H3F6 313 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 DDIT4Q9NX09 232 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 XPO7Q9UIA9 1087 aaKnown RBP13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 NFKBIEO00221 500 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 GPR182O15218 404 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 PROSCO94903 275 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 CCNE2O96020 404 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 S100BP04271 92 aaPredicted RBP13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 MCF2P10911 925 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 BOLA3Q53S33 107 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 CCDC33Q8N5R6 958 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 INPP4AQ96PE3 977 aaPredicted RBP13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 TTC1Q99614 292 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 TRIM56Q9BRZ2 755 aaKnown RBP13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 COL20A1Q9P218 1284 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 MID2Q9UJV3 735 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 TIMM13Q9Y5L4 95 aaPredicted RBP13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 RGPD1P0DJD0 1748 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 SPATA31C2B4DYI2 1134 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 NCF2P19878 526 aaPredicted RBP13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 SLC29A2Q14542 456 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 CYTH2Q99418 400 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 ZFATQ9P243 1243 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 MYPNQ86TC9 1320 aa13.7□□□□□ -0.22
PCDHGB1-201ENST00000523390 LACTBL1A8MY62 500 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 M0QYT0 321 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 RNF225M0QZC1 329 aaPredicted RBP13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 CDH16O75309 829 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 HSPA4LO95757 839 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 GJB1P08034 283 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 ZNF235Q14590 738 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 FBXO47Q5MNV8 452 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 HYIQ5T013 277 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 TRMT10CQ7L0Y3 403 aaKnown RBP13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 MCOLN2Q8IZK6 566 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 PABPC5Q96DU9 382 aaKnown RBP13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 ZC3H7BQ9UGR2 993 aaKnown RBP13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 A0A0A6YYK5 440 aaPredicted RBP13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 ZSCAN5CA6NGD5 496 aaPredicted RBP13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 TYK2P29597 1187 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 MFSD10Q14728 455 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 CRLF3Q8IUI8 442 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 ADGRF2Q8IZF7 708 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 C4orf33Q8N1A6 199 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 RAPGEF5Q92565 580 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 TGS1Q96RS0 853 aaKnown RBP13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 TRIM55Q9BYV6 548 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 TRABDQ9H4I3 376 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 PPARGC1AQ9UBK2 798 aaKnown RBP13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 ZNF142P52746 1687 aaPredicted RBP13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 CASTOR2A6NHX0 329 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 GJB6O95452 261 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 THP07101 528 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 GHRP10912 638 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms