RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 ITPR1Q14643 2758 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 SALL3Q9BXA9 1300 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 SMIM35A0A1B0GVV1 85 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 RRN3P2A6NIE6 340 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 H3BS24 57 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 SHOXO15266 292 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 KLF4O43474 513 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 CYTH3O43739 400 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 RPLP2P05387 115 aaKnown RBP7.2□□□□□ -1.26
VPS13B-211ENST00000522802 MX1P20591 662 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 NMIQ13287 307 aaPredicted RBP7.2□□□□□ -1.26
VPS13B-211ENST00000522802 WTAPQ15007 396 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 KIZQ2M2Z5 673 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 LETM2Q2VYF4 491 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 GAB4Q2WGN9 574 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 C20orf194Q5TEA3 1177 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 MTHFD1LQ6UB35 978 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 IQCA1Q86XH1 822 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 VPS52Q8N1B4 723 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 SAMD3Q8N6K7 520 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 RNF169Q8NCN4 708 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 ENOX1Q8TC92 643 aaKnown RBP7.2□□□□□ -1.26
VPS13B-211ENST00000522802 SEPT1Q8WYJ6 367 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 KLHL6Q8WZ60 621 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 RTKNQ9BST9 563 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 VN1R3Q9BXE9 311 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 PRDM14Q9GZV8 571 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 MKRN2Q9H000 416 aaKnown RBP7.2□□□□□ -1.26
VPS13B-211ENST00000522802 TRIT1Q9H3H1 467 aaKnown RBP7.2□□□□□ -1.26
VPS13B-211ENST00000522802 SMARCAD1Q9H4L7 1026 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 RNF41Q9H4P4 317 aaPredicted RBP7.2□□□□□ -1.26
VPS13B-211ENST00000522802 DCTPP1Q9H773 170 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 HELLSQ9NRZ9 838 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 ACTR10Q9NZ32 417 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 ZSWIM5Q9P217 1185 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 IGSF9Q9P2J2 1179 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 USP18Q9UMW8 372 aa7.2□□□□□ -1.26
VPS13B-211ENST00000522802 CNOT1A5YKK6 2376 aaKnown RBP7.2□□□□□ -1.26
VPS13B-211ENST00000522802 DSPP15924 2871 aaKnown RBP7.2□□□□□ -1.26
VPS13B-211ENST00000522802 AKAP13Q12802 2813 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 SHISA3A0PJX4 238 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 WASH4PA8MWX3 477 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 PRR5-ARHGAP8B1AHC4 643 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 CXCL14O95715 111 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 TP53P04637 393 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-211ENST00000522802 CD8BP10966 210 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 SDHBP21912 280 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 CD96P40200 585 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 BCAR1P56945 870 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 FAM189BP81408 668 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 ARHGAP8P85298 464 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 SLC7A5Q01650 507 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 SNW1Q13573 536 aaKnown RBP7.19□□□□□ -1.26
VPS13B-211ENST00000522802 SF3A1Q15459 793 aaKnown RBP7.19□□□□□ -1.26
VPS13B-211ENST00000522802 PTPN14Q15678 1187 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 MCMDC2Q4G0Z9 681 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 TDRD10Q5VZ19 366 aaKnown RBP7.19□□□□□ -1.26
VPS13B-211ENST00000522802 USP17L6PQ6QN14 398 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 ANKS3Q6ZW76 656 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 TSPYL5Q86VY4 417 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-211ENST00000522802 KIAA0319LQ8IZA0 1049 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 ABI1Q8IZP0 508 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 SLC44A3Q8N4M1 653 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 GIMAP8Q8ND71 665 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-211ENST00000522802 SREK1Q8WXA9 508 aaKnown RBP7.19□□□□□ -1.26
VPS13B-211ENST00000522802 PIBF1Q8WXW3 757 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 MYADMQ96S97 322 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 EPC1Q9H2F5 836 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 ELAC1Q9H777 363 aaKnown RBP7.19□□□□□ -1.26
VPS13B-211ENST00000522802 ATP13A1Q9HD20 1204 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 GPATCH2Q9NW75 528 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.19□□□□□ -1.26
VPS13B-211ENST00000522802 CLUHO75153 1309 aa7.19□□□□□ -1.26
VPS13B-211ENST00000522802 MEIS2O14770 477 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 B4GALT3O60512 393 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 ZC3H11AO75152 810 aaKnown RBP eCLIP7.18□□□□□ -1.26
VPS13B-211ENST00000522802 STK10O94804 968 aaKnown RBP7.18□□□□□ -1.26
VPS13B-211ENST00000522802 VTNP04004 478 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 MYBP10242 640 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 CTSAP10619 480 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 KLRC1P26715 233 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 CLCN4P51793 760 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 DMWDQ09019 674 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 MTMR1Q13613 665 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 SEC23AQ15436 765 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 ZNF528Q3MIS6 628 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 IFIT1BQ5T764 474 aaKnown RBP7.18□□□□□ -1.26
VPS13B-211ENST00000522802 DCLRE1AQ6PJP8 1040 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 TSSK4Q6SA08 328 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 TMPRSS7Q7RTY8 843 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 TMC3Q7Z5M5 1100 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 NLRX1Q86UT6 975 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 ECHDC2Q86YB7 292 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 SMARCC2Q8TAQ2 1214 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 EVI5LQ96CN4 794 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 TMEM169Q96HH4 297 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 RIOX1Q9H6W3 641 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 SPATA6Q9NWH7 488 aaPredicted RBP7.18□□□□□ -1.26
VPS13B-211ENST00000522802 PRR13Q9NZ81 148 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 EPS15L1Q9UBC2 864 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms