RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	DFFA	O00273	331 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	DIAPH2	O60879	1101 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	MT-ND3	P03897	115 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	HNRNPC	P07910	306 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	KEL	P23276	732 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	THOP1	P52888	689 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	MAGOH	P61326	146 aa	Known RBP	10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	MAGOHB	Q96A72	148 aa	Known RBP	10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	LRRC46	Q96FV0	321 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	PRPF18	Q99633	342 aa	Known RBP	10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	EML4	Q9HC35	981 aa	Known RBP	10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	ARHGAP26	Q9UNA1	814 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	IQGAP1	P46940	1657 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	GRIN1	Q05586	938 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	KLC1	Q07866	573 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	HDDC3	Q8N4P3	179 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	CEP70	Q8NHQ1	597 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	GPR63	Q9BZJ6	419 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	CD248	Q9HCU0	757 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	DNAJC12	Q9UKB3	198 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	NRK	Q7Z2Y5	1582 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	GNS	P15586	552 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	EIF4A3	P38919	411 aa	Known RBP	10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	BCAR1	P56945	870 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	TCP11X2	Q5H9J9	407 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	FAM102A	Q5T9C2	384 aa	Predicted RBP	10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	RESP18	Q5W5W9	173 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	NAIF1	Q69YI7	327 aa	Predicted RBP	10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	USP17L6P	Q6QN14	398 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	PACS2	Q86VP3	889 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	CCDC138	Q96M89	665 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	STK33	Q9BYT3	514 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	IRF2BPL	Q9H1B7	796 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	ASAH2	Q9NR71	780 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	C6orf203	Q9P0P8	240 aa	Predicted RBP	10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	KDM4F	A0A1W2PPD8	638 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	FAM196B	A6NMK8	535 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653		H0Y3Z8	333 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	SMAP	O00193	183 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	P4HA2	O15460	535 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	NDUFS3	O75489	264 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	FTCD	O95954	541 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	SLC1A1	P43005	524 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	SFR1	Q86XK3	245 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	ABCG4	Q9H172	646 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	ABI3	Q9P2A4	366 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	CRYL1	Q9Y2S2	319 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	PPRC1	Q5VV67	1664 aa	Known RBP	10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	NCAPH	Q15003	741 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	NAA35	Q5VZE5	725 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	MOXD1	Q6UVY6	613 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	RASGRP4	Q8TDF6	673 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	PIGO	Q8TEQ8	1089 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	SERPINI1	Q99574	410 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	POP1	Q99575	1024 aa	Known RBP	10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	C5orf58	C9J3I9	102 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	SNUPN	O95149	360 aa	Known RBP	10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	PFKM	P08237	780 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	CDC27	P30260	824 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	LSP1	P33241	339 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	PLCL1	Q15111	1095 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	TCEA2	Q15560	299 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	MMGT1	Q8N4V1	131 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	MRPS23	Q9Y3D9	190 aa	Known RBP	10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	NEURL4	Q96JN8	1562 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	GRID2IP	A4D2P6	1211 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	INPP4B	O15327	924 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	EXTL3	O43909	919 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	SUPT3H	O75486	399 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	MTA2	O94776	668 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	ESRRA	P11474	423 aa	Predicted RBP	10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	LCP1	P13796	627 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	PSMD7	P51665	324 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	POLR2L	P62875	67 aa	Known RBP	10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	ITPK1	Q13572	414 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	MFSD4B	Q5TF39	518 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	HLA-DQA1	Q5Y7H0	255 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	CCNI2	Q6ZMN8	369 aa	Predicted RBP	10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	SMYD4	Q8IYR2	804 aa	Predicted RBP	10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	C7orf61	Q8IZ16	206 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	C12orf50	Q8NA57	414 aa	Predicted RBP	10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	ZKSCAN4	Q969J2	545 aa	Predicted RBP	10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	TADA1	Q96BN2	335 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	GMCL1	Q96IK5	515 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	SYT17	Q9BSW7	474 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	PITPNM3	Q9BZ71	974 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	TMEM60	Q9H2L4	133 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	ARMC7	Q9H6L4	198 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	USP18	Q9UMW8	372 aa		10.8	□□□□□ -0.68
TCF7-223	ENST00000522653	ITGB6	P18564	788 aa		10.79	□□□□□ -0.68
TCF7-223	ENST00000522653	CDC25C	P30307	473 aa		10.79	□□□□□ -0.68
TCF7-223	ENST00000522653	RFC2	P35250	354 aa		10.79	□□□□□ -0.68
TCF7-223	ENST00000522653	GPR158	Q5T848	1215 aa		10.79	□□□□□ -0.68
TCF7-223	ENST00000522653	PHACTR4	Q8IZ21	702 aa		10.79	□□□□□ -0.68
TCF7-223	ENST00000522653	DDI1	Q8WTU0	396 aa		10.79	□□□□□ -0.68
TCF7-223	ENST00000522653	KCNB2	Q92953	911 aa		10.79	□□□□□ -0.68
TCF7-223	ENST00000522653	HES6	Q96HZ4	224 aa		10.79	□□□□□ -0.68
TCF7-223	ENST00000522653	ATXN3L	Q9H3M9	355 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms