RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 PRSS55Q6UWB4 352 aaPredicted RBP13.19□□□□□ -0.3
PABPC1-219ENST00000522387 OSTM1Q86WC4 334 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 VN1R3Q9BXE9 311 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 BCO2Q9BYV7 579 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 SEPT11Q9NVA2 429 aaKnown RBP13.19□□□□□ -0.3
PABPC1-219ENST00000522387 FGF18O76093 207 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 CFHP08603 1231 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 RGS19P49795 217 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 SFMBT2Q5VUG0 894 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 PDXDC1Q6P996 788 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 RBBP8NLQ8NC74 664 aaPredicted RBP13.19□□□□□ -0.3
PABPC1-219ENST00000522387 LRRN4CLQ8ND94 238 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 SLC20A1Q8WUM9 679 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 SHC3Q92529 594 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 TAF4BQ92750 862 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 SNX25Q9H3E2 840 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 VRTNQ9H8Y1 702 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 GDAP2Q9NXN4 497 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 PCDHB12Q9Y5F1 795 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 PCDHGC5Q9Y5F6 944 aa13.19□□□□□ -0.3
PABPC1-219ENST00000522387 SF3B1O75533 1304 aaKnown RBP eCLIP13.19□□□□□ -0.36e-6■■■■■ 43.4
PABPC1-219ENST00000522387 FANCGO15287 622 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 CCP110O43303 1012 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 ODC1P11926 461 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 SOX5P35711 763 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 STAT1P42224 750 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 YWHAHQ04917 246 aaPredicted RBP13.18□□□□□ -0.3
PABPC1-219ENST00000522387 TSR1Q2NL82 804 aaKnown RBP13.18□□□□□ -0.3
PABPC1-219ENST00000522387 FIGNQ5HY92 759 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 KIAA0319Q5VV43 1072 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 KIAA1841Q6NSI8 718 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 WDR59Q6PJI9 974 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 PASD1Q8IV76 773 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 CNGA4Q8IV77 575 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 OR8K1Q8NGG5 319 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 WHAMMQ8TF30 809 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 HEXIM2Q96MH2 286 aaKnown RBP13.18□□□□□ -0.3
PABPC1-219ENST00000522387 ELOVL4Q9GZR5 314 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 NKX2-4Q9H2Z4 354 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 HAUS4Q9H6D7 363 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 ZNF446Q9NWS9 450 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 CILPO75339 1184 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 LAG3P18627 525 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 BRD2P25440 801 aaKnown RBP13.18□□□□□ -0.3
PABPC1-219ENST00000522387 TRIM14Q14142 442 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 OVOS1Q6IE37 1185 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 VPS52Q8N1B4 723 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 ARNTL2Q8WYA1 636 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 SUSD3Q96L08 255 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 PGLYRP2Q96PD5 576 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.18□□□□□ -0.3
PABPC1-219ENST00000522387 GTF3C4Q9UKN8 822 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 STXBP5LQ9Y2K9 1186 aa13.18□□□□□ -0.3
PABPC1-219ENST00000522387 VWA8A3KMH1 1905 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.17□□□□□ -0.3
PABPC1-219ENST00000522387 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.17□□□□□ -0.3
PABPC1-219ENST00000522387 A0A1W2PQJ5 194 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 TRAPPC3O43617 180 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 H2AFXP16104 143 aaPredicted RBP13.17□□□□□ -0.3
PABPC1-219ENST00000522387 AARSP49588 968 aaKnown RBP eCLIP13.17□□□□□ -0.3
PABPC1-219ENST00000522387 RAD23BP54727 409 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 ETF1P62495 437 aaKnown RBP13.17□□□□□ -0.3
PABPC1-219ENST00000522387 PTK2Q05397 1052 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 KLHL30Q0D2K2 578 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 TERF2Q15554 542 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 ASIC2Q16515 512 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 VARS2Q5ST30 1063 aaKnown RBP13.17□□□□□ -0.3
PABPC1-219ENST00000522387 REXO1L1PQ8IX06 675 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 FAM71AQ8IYT1 594 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 SLC39A11Q8N1S5 342 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 RIN2Q8WYP3 895 aaPredicted RBP13.17□□□□□ -0.3
PABPC1-219ENST00000522387 TMEM175Q9BSA9 504 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 RHOBTB2Q9BYZ6 727 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 IRX2Q9BZI1 471 aaPredicted RBP13.17□□□□□ -0.3
PABPC1-219ENST00000522387 SPG21Q9NZD8 308 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 DNAI1Q9UI46 699 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 BARX2Q9UMQ3 279 aaPredicted RBP13.17□□□□□ -0.3
PABPC1-219ENST00000522387 PPP2R2CQ9Y2T4 447 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 KIAA1671Q9BY89 1806 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 TMCO5BA8MYB1 307 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 M0QZQ0 153 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 RFXAPO00287 272 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 CLDN5O00501 218 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 ARHGAP6O43182 974 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 THAP12O43422 761 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 CCDC130P13994 396 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 GNA15P30679 374 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 PPP2R2DQ66LE6 453 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 RSPO2Q6UXX9 243 aaPredicted RBP13.17□□□□□ -0.3
PABPC1-219ENST00000522387 IRF2BP2Q7Z5L9 587 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 SLC4A11Q8NBS3 891 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 OR10T2Q8NGX3 314 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 MICAL1Q8TDZ2 1067 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 TFAP2BQ92481 460 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 CLP1Q92989 425 aaKnown RBP13.17□□□□□ -0.3
PABPC1-219ENST00000522387 ARHGAP20Q9P2F6 1191 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 FBXL5Q9UKA1 691 aa13.17□□□□□ -0.3
PABPC1-219ENST00000522387 COLQQ9Y215 455 aaPredicted RBP13.17□□□□□ -0.3
PABPC1-219ENST00000522387 MYBPHLA2RUH7 354 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 STAU1O95793 577 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms