RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 CLCNKBP51801 687 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 VAMP7P51809 220 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 DLG4P78352 724 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 SPAG1Q07617 926 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 DUOXA2Q1HG44 320 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 HABP4Q5JVS0 413 aaKnown RBP9.01□□□□□ -0.97
VPS13B-210ENST00000521932 C1orf220Q5T0J3 134 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 PHLDB3Q6NSJ2 640 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 DCLRE1AQ6PJP8 1040 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 LRSAM1Q6UWE0 723 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 C15orf39Q6ZRI6 1047 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 SND1Q7KZF4 910 aaKnown RBP eCLIP9.01□□□□□ -0.97
VPS13B-210ENST00000521932 TRIM59Q8IWR1 403 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 COLGALT1Q8NBJ5 622 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 GALNT6Q8NCL4 622 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 BEST2Q8NFU1 509 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 NOC3LQ8WTT2 800 aaKnown RBP9.01□□□□□ -0.97
VPS13B-210ENST00000521932 C18orf25Q96B23 403 aaPredicted RBP9.01□□□□□ -0.97
VPS13B-210ENST00000521932 CCDC127Q96BQ5 260 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 POP1Q99575 1024 aaKnown RBP9.01□□□□□ -0.97
VPS13B-210ENST00000521932 PAAF1Q9BRP4 392 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 THAP9Q9H5L6 903 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 DPP3Q9NY33 737 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 KLF15Q9UIH9 416 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 FAN1Q9Y2M0 1017 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 PCDHB12Q9Y5F1 795 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 PTPRJQ12913 1337 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 CASTOR2A6NHX0 329 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 LRRC10BA6NIK2 292 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 SOX1O00570 391 aaPredicted RBP9□□□□□ -0.97
VPS13B-210ENST00000521932 KHNYNO15037 678 aaKnown RBP9□□□□□ -0.97
VPS13B-210ENST00000521932 PMM2O15305 246 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 EFSO43281 561 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 CST3P01034 146 aaPredicted RBP9□□□□□ -0.97
VPS13B-210ENST00000521932 C4BPAP04003 597 aaKnown RBP9□□□□□ -0.97
VPS13B-210ENST00000521932 FAM157BP0CG42 384 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 DLATP10515 647 aaKnown RBP9□□□□□ -0.97
VPS13B-210ENST00000521932 PAX3P23760 479 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 GTF2H1P32780 548 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 PPM1AP35813 382 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 OR1G1P47890 313 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 SLC11A1P49279 550 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 ZNF165P49910 485 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 ZNF445P59923 1031 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 PLCB3Q01970 1234 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 MYL5Q02045 173 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 NCAPHQ15003 741 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 EPC2Q52LR7 807 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 SPOUT1Q5T280 376 aaKnown RBP9□□□□□ -0.97
VPS13B-210ENST00000521932 CDKAL1Q5VV42 579 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 CD300LGQ6UXG3 332 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 DHX40Q8IX18 779 aaKnown RBP9□□□□□ -0.97
VPS13B-210ENST00000521932 SLC39A11Q8N1S5 342 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 C1orf127Q8N9H9 656 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 OR5B17Q8NGF7 314 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 IGSF21Q96ID5 467 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 ANKRD36BP1Q96IX9 119 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 ZNF558Q96NG5 402 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 CGRRF1Q99675 332 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 C17orf80Q9BSJ5 609 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 COLEC11Q9BWP8 271 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 ZNF576Q9H609 170 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 GOLGA2P5Q9HBQ8 144 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 SAMSN1Q9NSI8 373 aaKnown RBP9□□□□□ -0.97
VPS13B-210ENST00000521932 SPG21Q9NZD8 308 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 STK39Q9UEW8 545 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 TUBGCP4Q9UGJ1 667 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 ARMCX3Q9UH62 379 aaPredicted RBP9□□□□□ -0.97
VPS13B-210ENST00000521932 ITGA11Q9UKX5 1188 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 NFE2L3Q9Y4A8 694 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 CHD9Q3L8U1 2897 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 CITO14578 2027 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 CHD7Q9P2D1 2997 aa9□□□□□ -0.97
VPS13B-210ENST00000521932 TRIP11Q15643 1979 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 SERTM1A2A2V5 107 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 SMTNL1A8MU46 457 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 NT5C1B-RDH14C9J2C7 533 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 H3BNC9 293 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 PODXLO00592 558 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 STX10O60499 249 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 FGF18O76093 207 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 B3GAT3O94766 335 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 TNNC2P02585 160 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 TMEM191BP0C7N4 346 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 PBX3P40426 434 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 AARSP49588 968 aaKnown RBP eCLIP8.99□□□□□ -0.97
VPS13B-210ENST00000521932 TFAMQ00059 246 aaKnown RBP8.99□□□□□ -0.97
VPS13B-210ENST00000521932 PPP3CAQ08209 521 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 GRIN2CQ14957 1233 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 IQCB1Q15051 598 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 TPD52L1Q16890 204 aaPredicted RBP8.99□□□□□ -0.97
VPS13B-210ENST00000521932 ZACNQ401N2 412 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 SAMD5Q5TGI4 173 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 C9orf57Q5W0N0 161 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 LMBRD2Q68DH5 695 aaPredicted RBP8.99□□□□□ -0.97
VPS13B-210ENST00000521932 SCARA3Q6AZY7 606 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 SLCO4C1Q6ZQN7 724 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 TRAPPC11Q7Z392 1133 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 SPRED2Q7Z698 418 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 TMEM173Q86WV6 379 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms