RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 GPD1P21695 349 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 FXR1P51114 621 aaKnown RBP eCLIP16.93■□□□□ 0.3
USP42-207ENST00000521713 RAB27AP51159 221 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 DNAJC9Q8WXX5 260 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 ANKRD27Q96NW4 1050 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 TBC1D23Q9NUY8 699 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 E7ENQ6 273 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 EEF2KO00418 725 aaKnown RBP16.92■□□□□ 0.3
USP42-207ENST00000521713 ESRRBO95718 433 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 THP07101 528 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 ARSEP51690 589 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 SLC30A10Q6XR72 485 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 ZNF720Q7Z2F6 126 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 ZFPM1Q8IX07 1006 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 SHCBP1Q8NEM2 672 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 KRT35Q92764 455 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 XPO6Q96QU8 1125 aaKnown RBP16.92■□□□□ 0.3
USP42-207ENST00000521713 HMX1Q9NP08 348 aaPredicted RBP16.92■□□□□ 0.3
USP42-207ENST00000521713 NDUFA13Q9P0J0 144 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 HDAC6Q9UBN7 1215 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 ZNF711Q9Y462 761 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 VTNP04004 478 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 HMBSP08397 361 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 TRMT10CQ7L0Y3 403 aaKnown RBP16.92■□□□□ 0.3
USP42-207ENST00000521713 TRPM8Q7Z2W7 1104 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 RASSF3Q86WH2 238 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 CGRRF1Q99675 332 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 PI4K2AQ9BTU6 479 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 RSAD1Q9HA92 442 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 XPNPEP3Q9NQH7 507 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 OLFML3Q9NRN5 406 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 ENO4A6NNW6 628 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 H2AFXP16104 143 aaPredicted RBP16.92■□□□□ 0.3
USP42-207ENST00000521713 KRT4P19013 534 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 GRIK4Q16099 956 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 DCAF6Q58WW2 860 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 RIOX2Q8IUF8 465 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 SLC7A14Q8TBB6 771 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 ZBTB18Q99592 522 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 WDR18Q9BV38 432 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 KANSL3Q9P2N6 904 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 ESYT3A0FGR9 886 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 CASP2P42575 452 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 SERPINB10P48595 397 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 YWHAHQ04917 246 aaPredicted RBP16.92■□□□□ 0.3
USP42-207ENST00000521713 CBWD2Q8IUF1 395 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 REPS2Q8NFH8 660 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 CYFIP2Q96F07 1278 aa16.92■□□□□ 0.3
USP42-207ENST00000521713 A1CFQ9NQ94 594 aaKnown RBP16.92■□□□□ 0.3
USP42-207ENST00000521713 A0A087WZ62 844 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 MTSS1O43312 755 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 KCNA3P22001 575 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 GLRA4Q5JXX5 417 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 CATSPERGQ6ZRH7 1159 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 PTF1AQ7RTS3 328 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 TLK2Q86UE8 772 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 RAPGEF5Q92565 580 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 ULK4Q96C45 1275 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 FDXACB1Q9BRP7 624 aaPredicted RBP16.91■□□□□ 0.3
USP42-207ENST00000521713 LRRC1Q9BTT6 524 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 TMEM117Q9H0C3 514 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 RANBP17Q9H2T7 1088 aaKnown RBP16.91■□□□□ 0.3
USP42-207ENST00000521713 ABI2Q9NYB9 513 aaPredicted RBP16.91■□□□□ 0.3
USP42-207ENST00000521713 HPSEQ9Y251 543 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 CCT8L1PA6NM43 557 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 APOA1P02647 267 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 VDRP11473 427 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 PGM1P36871 562 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 COPS2P61201 443 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 MRPS25P82663 173 aaKnown RBP16.91■□□□□ 0.3
USP42-207ENST00000521713 HIC1Q14526 733 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 LY6KQ17RY6 165 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 BOLA3Q53S33 107 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 HIPK4Q8NE63 616 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 SUN2Q9UH99 717 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 KDM1AO60341 852 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 EGFRP00533 1210 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 LAMTOR4Q0VGL1 99 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 ACVR2BQ13705 512 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 PDK1Q15118 436 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 TAS2R42Q7RTR8 314 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 SETD4Q9NVD3 440 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 PI4K2BG5E9Z4 385 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 KCNN4O15554 427 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 DEAF1O75398 565 aaPredicted RBP16.91■□□□□ 0.3
USP42-207ENST00000521713 ACADSP16219 412 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 ARHGDIAP52565 204 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 RPL10AP62906 217 aaKnown RBP16.91■□□□□ 0.3
USP42-207ENST00000521713 OCRLQ01968 901 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 TMEM132BQ14DG7 1078 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 CHADLQ6NUI6 762 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 DDX53Q86TM3 631 aaKnown RBP16.91■□□□□ 0.3
USP42-207ENST00000521713 ZBED8Q8IZ13 594 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 CERS5Q8N5B7 392 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 FEZF2Q8TBJ5 459 aa16.91■□□□□ 0.3
USP42-207ENST00000521713 SYCE1LA8MT33 242 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 MSCO60682 206 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 ATN1P54259 1190 aaPredicted RBP16.9■□□□□ 0.3
USP42-207ENST00000521713 NSUN2Q08J23 767 aaKnown RBP eCLIP16.9■□□□□ 0.3
USP42-207ENST00000521713 MTF1Q14872 753 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms