RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 PTPN11Q06124 597 aaPredicted RBP11.99□□□□□ -0.49
CLK4-206ENST00000520878 IFT88Q13099 833 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 APBB1IPQ7Z5R6 666 aaPredicted RBP11.99□□□□□ -0.49
CLK4-206ENST00000520878 C12orf29Q8N999 325 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 BRI3BPQ8WY22 251 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.99□□□□□ -0.49
CLK4-206ENST00000520878 TINF2Q9BSI4 451 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 DDX23Q9BUQ8 820 aaKnown RBP11.99□□□□□ -0.49
CLK4-206ENST00000520878 PABPC3Q9H361 631 aaKnown RBP11.99□□□□□ -0.49
CLK4-206ENST00000520878 AVENQ9NQS1 362 aaPredicted RBP11.99□□□□□ -0.49
CLK4-206ENST00000520878 INTS9Q9NV88 658 aaKnown RBP11.99□□□□□ -0.49
CLK4-206ENST00000520878 KCNH4Q9UQ05 1017 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 EIF3HO15372 352 aaKnown RBP eCLIP11.99□□□□□ -0.49
CLK4-206ENST00000520878 CST8O60676 142 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 PDGFRAP16234 1089 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 GBP1P32455 592 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 MDH1P40925 334 aaKnown RBP11.99□□□□□ -0.49
CLK4-206ENST00000520878 C1QBPQ07021 282 aaKnown RBP11.99□□□□□ -0.49
CLK4-206ENST00000520878 MCL1Q07820 350 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 CCDC33Q8N5R6 958 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 C1orf127Q8N9H9 656 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 DNAJB3Q8WWF6 145 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 CABS1Q96KC9 395 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 STRIP2Q9ULQ0 834 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 IGKV6D-21A0A0A0MT36 114 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 DCDC2CA8MYV0 355 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 C6orf222P0C671 652 aaPredicted RBP11.99□□□□□ -0.49
CLK4-206ENST00000520878 ETS1P14921 441 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 MAN1A1P33908 653 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 NDST1P52848 882 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 EIF3BP55884 814 aaKnown RBP11.99□□□□□ -0.49
CLK4-206ENST00000520878 ARHGAP1Q07960 439 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 BYSLQ13895 437 aaKnown RBP11.99□□□□□ -0.49
CLK4-206ENST00000520878 MON1BQ7L1V2 547 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 TMEM121Q9BTD3 319 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 STMN4Q9H169 189 aaPredicted RBP11.99□□□□□ -0.49
CLK4-206ENST00000520878 TNFSF13BQ9Y275 285 aa11.99□□□□□ -0.49
CLK4-206ENST00000520878 MYH9P35579 1960 aaKnown RBP11.99□□□□□ -0.49
CLK4-206ENST00000520878 F5H423 210 aaPredicted RBP11.98□□□□□ -0.49
CLK4-206ENST00000520878 TRIM66O15016 1216 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 PRPSAP2O60256 369 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 GRIN3BO60391 1043 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 RARBP10826 455 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 CDH6P55285 790 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 MBTD1Q05BQ5 628 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 CCDC62Q6P9F0 684 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 C15orf39Q6ZRI6 1047 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 ZDHHC14Q8IZN3 488 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 MSL3Q8N5Y2 521 aaKnown RBP11.98□□□□□ -0.49
CLK4-206ENST00000520878 VTA1Q9NP79 307 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 SOCS7O14512 581 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 STRNO43815 780 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 HOXC6P09630 235 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 IQCF3P0C7M6 154 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 GBP2P32456 591 aaPredicted RBP11.98□□□□□ -0.49
CLK4-206ENST00000520878 GCLCP48506 637 aaPredicted RBP11.98□□□□□ -0.49
CLK4-206ENST00000520878 FNTAP49354 379 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 C1orf228Q6PIY5 440 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 MICALCLQ6ZW33 695 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 RCOR2Q8IZ40 523 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 GDAP1Q8TB36 358 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 TMEM176AQ96HP8 235 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 DCLK3Q9C098 648 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 SNX25Q9H3E2 840 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 ABHD16BQ9H3Z7 469 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 HOMER3Q9NSC5 361 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 HMGXB4Q9UGU5 601 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 DNPEPQ9ULA0 475 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 STYXL1Q9Y6J8 313 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 C22orf31O95567 290 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 PIGRP01833 764 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 CYP1A1P04798 512 aaPredicted RBP11.98□□□□□ -0.49
CLK4-206ENST00000520878 LCP1P13796 627 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 SMPD1P17405 629 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 MMP8P22894 467 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 IFI35P80217 286 aaPredicted RBP11.98□□□□□ -0.49
CLK4-206ENST00000520878 IFRD2Q12894 506 aaPredicted RBP11.98□□□□□ -0.49
CLK4-206ENST00000520878 PIGHQ14442 188 aaPredicted RBP11.98□□□□□ -0.49
CLK4-206ENST00000520878 TMED2Q15363 201 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 ZKSCAN8Q15776 578 aaPredicted RBP11.98□□□□□ -0.49
CLK4-206ENST00000520878 BBS9Q3SYG4 887 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 DARS2Q6PI48 645 aaKnown RBP11.98□□□□□ -0.49
CLK4-206ENST00000520878 MTHFD1LQ6UB35 978 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 TSHZ1Q6ZSZ6 1077 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 ANKMY2Q8IV38 441 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 CCDC13Q8IYE1 715 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 JOSD2Q8TAC2 188 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 RAPGEF5Q92565 580 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 MED10Q9BTT4 135 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 NT5C1AQ9BXI3 368 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 GPATCH2LQ9NWQ4 482 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 NOD1Q9Y239 953 aa11.98□□□□□ -0.49
CLK4-206ENST00000520878 TNPO2O14787 897 aaKnown RBP11.97□□□□□ -0.49
CLK4-206ENST00000520878 C6orf118Q5T5N4 469 aa11.97□□□□□ -0.49
CLK4-206ENST00000520878 BSPRYQ5W0U4 402 aa11.97□□□□□ -0.49
CLK4-206ENST00000520878 TXNRD3NBQ6F5E7 133 aa11.97□□□□□ -0.49
CLK4-206ENST00000520878 PPP1R2P3Q6NXS1 205 aa11.97□□□□□ -0.49
CLK4-206ENST00000520878 LRIG3Q6UXM1 1119 aa11.97□□□□□ -0.49
CLK4-206ENST00000520878 TAOK1Q7L7X3 1001 aa11.97□□□□□ -0.49
CLK4-206ENST00000520878 CDC42EP4Q9H3Q1 356 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms