RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 COL9A2Q14055 689 aaPredicted RBP9.11□□□□□ -0.95
SHPRH-208ENST00000520752 PTPN21Q16825 1174 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 TCP11X2Q5H9J9 407 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 KIAA1841Q6NSI8 718 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 WDR59Q6PJI9 974 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 NEK10Q6ZWH5 1172 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 REXO1Q8N1G1 1221 aaKnown RBP9.11□□□□□ -0.95
SHPRH-208ENST00000520752 FAM133AQ8N9E0 248 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 PRICKLE1Q96MT3 831 aaPredicted RBP9.11□□□□□ -0.95
SHPRH-208ENST00000520752 GPR101Q96P66 508 aaPredicted RBP9.11□□□□□ -0.95
SHPRH-208ENST00000520752 SRPK1Q96SB4 655 aaKnown RBP9.11□□□□□ -0.95
SHPRH-208ENST00000520752 OLFM1Q99784 485 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 CTRCQ99895 268 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 ECSITQ9BQ95 431 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 SELENOSQ9BQE4 189 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 TLR10Q9BXR5 811 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 IFIH1Q9BYX4 1025 aaKnown RBP9.11□□□□□ -0.95
SHPRH-208ENST00000520752 EDEM3Q9BZQ6 932 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 DENND2DQ9H6A0 471 aaPredicted RBP9.11□□□□□ -0.95
SHPRH-208ENST00000520752 C10orf88Q9H8K7 445 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 NLRC4Q9NPP4 1024 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 PCSK1NQ9UHG2 260 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 TRIM17Q9Y577 477 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 PCDHA13Q9Y5I0 950 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 CSADQ9Y600 493 aa9.11□□□□□ -0.95
SHPRH-208ENST00000520752 ERVV-2B6SEH9 535 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 PFDN6O15212 129 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 TLR3O15455 904 aaKnown RBP9.1□□□□□ -0.95
SHPRH-208ENST00000520752 TEX28O15482 410 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 RNMTO43148 476 aaKnown RBP9.1□□□□□ -0.95
SHPRH-208ENST00000520752 GAS2O43903 313 aaKnown RBP9.1□□□□□ -0.95
SHPRH-208ENST00000520752 TSPAN1O60635 241 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 FGFR1OPO95684 399 aaKnown RBP9.1□□□□□ -0.95
SHPRH-208ENST00000520752 SPATA31D3P0C874 917 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 UBTFL6P0CB48 400 aaPredicted RBP9.1□□□□□ -0.95
SHPRH-208ENST00000520752 HSPA1AP0DMV8 641 aaKnown RBP9.1□□□□□ -0.95
SHPRH-208ENST00000520752 HSPA1BP0DMV9 641 aaKnown RBP9.1□□□□□ -0.95
SHPRH-208ENST00000520752 UBL4AP11441 157 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 M6PRP20645 277 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 NTF4P34130 210 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 ETV3P41162 512 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 DRG2P55039 364 aaKnown RBP9.1□□□□□ -0.95
SHPRH-208ENST00000520752 RPS3AP61247 264 aaKnown RBP9.1□□□□□ -0.95
SHPRH-208ENST00000520752 DR1Q01658 176 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 PFKPQ01813 784 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 NR1D2Q14995 579 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 WTAPQ15007 396 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 ANKDD1AQ495B1 522 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 SEZ6Q53EL9 994 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 PPM1JQ5JR12 505 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 ZBTB37Q5TC79 503 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 METTL21CQ5VZV1 264 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 TWF2Q6IBS0 349 aaKnown RBP9.1□□□□□ -0.95
SHPRH-208ENST00000520752 CLEC4GQ6UXB4 293 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 PPP1R21Q6ZMI0 780 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 SPATA31D4Q6ZUB0 917 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 TTC30AQ86WT1 665 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 MCF2L2Q86YR7 1114 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 CSGALNACT2Q8N6G5 542 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 USP38Q8NB14 1042 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 SUPT20HQ8NEM7 779 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 OR7G1Q8NGA0 311 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 ACTRT1Q8TDG2 376 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 SCFD2Q8WU76 684 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 ATL1Q8WXF7 558 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 MAGEB18Q96M61 343 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 INPP4AQ96PE3 977 aaPredicted RBP9.1□□□□□ -0.95
SHPRH-208ENST00000520752 BTBD9Q96Q07 612 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 KRT12Q99456 494 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 MAP3K14Q99558 947 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 HAUS7Q99871 368 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 PRMT1Q99873 361 aaKnown RBP9.1□□□□□ -0.95
SHPRH-208ENST00000520752 HEPHQ9BQS7 1158 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 MRPS26Q9BYN8 205 aaKnown RBP9.1□□□□□ -0.95
SHPRH-208ENST00000520752 STK33Q9BYT3 514 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 CRNKL1Q9BZJ0 848 aaKnown RBP9.1□□□□□ -0.95
SHPRH-208ENST00000520752 SLC7A5P2Q9GIP4 190 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 WNT10AQ9GZT5 417 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 TMEM60Q9H2L4 133 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 PABPC3Q9H361 631 aaKnown RBP9.1□□□□□ -0.95
SHPRH-208ENST00000520752 ACSS3Q9H6R3 686 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 C14orf93Q9H972 538 aaKnown RBP9.1□□□□□ -0.95
SHPRH-208ENST00000520752 AS3MTQ9HBK9 375 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 POLD4Q9HCU8 107 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 GINM1Q9NU53 330 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.1□□□□□ -0.95
SHPRH-208ENST00000520752 PNMA2Q9UL42 364 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 SCAF8Q9UPN6 1271 aaKnown RBP9.1□□□□□ -0.95
SHPRH-208ENST00000520752 COQ6Q9Y2Z9 468 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 ZFYVE16Q7Z3T8 1539 aa9.1□□□□□ -0.95
SHPRH-208ENST00000520752 ATP8B3O60423 1300 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 ABCA8O94911 1581 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 DYTNA2CJ06 578 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 FUOMA2VDF0 154 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 TRIM64CA6NLI5 447 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 GOLGA8BA8MQT2 603 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 KCNJ18B7U540 433 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 CAPN9O14815 690 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 AREL1O15033 823 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 FYB1O15117 783 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms