RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 RASSF3Q86WH2 238 aa8.73□□□□□ -1.01
CSMD1-209ENST00000520630 OLIG1Q8TAK6 271 aa8.73□□□□□ -1.01
CSMD1-209ENST00000520630 DDX12PQ92771 950 aa8.73□□□□□ -1.01
CSMD1-209ENST00000520630 LRIG1Q96JA1 1093 aa8.73□□□□□ -1.01
CSMD1-209ENST00000520630 SUSD3Q96L08 255 aa8.73□□□□□ -1.01
CSMD1-209ENST00000520630 UROC1Q96N76 676 aa8.73□□□□□ -1.01
CSMD1-209ENST00000520630 PGLYRP2Q96PD5 576 aa8.73□□□□□ -1.01
CSMD1-209ENST00000520630 FNBP1Q96RU3 617 aa8.73□□□□□ -1.01
CSMD1-209ENST00000520630 SLC46A2Q9BY10 475 aa8.73□□□□□ -1.01
CSMD1-209ENST00000520630 ZSCAN16Q9H4T2 348 aaPredicted RBP8.73□□□□□ -1.01
CSMD1-209ENST00000520630 EBF3Q9H4W6 596 aa8.73□□□□□ -1.01
CSMD1-209ENST00000520630 POLD4Q9HCU8 107 aa8.73□□□□□ -1.01
CSMD1-209ENST00000520630 ANKEF1Q9NU02 776 aa8.73□□□□□ -1.01
CSMD1-209ENST00000520630 EVLQ9UI08 416 aaPredicted RBP8.73□□□□□ -1.01
CSMD1-209ENST00000520630 KCNJ14Q9UNX9 436 aa8.73□□□□□ -1.01
CSMD1-209ENST00000520630 ARID1BQ8NFD5 2236 aaPredicted RBP8.73□□□□□ -1.01
CSMD1-209ENST00000520630 ACKR2O00590 384 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 ABLIM1O14639 778 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 TRAPPC3O43617 180 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 USO1O60763 962 aaKnown RBP8.72□□□□□ -1.01
CSMD1-209ENST00000520630 ATG13O75143 517 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 SPATA31C1P0DKV0 1188 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 CD59P13987 128 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 GBP1P32455 592 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 MCM4P33991 863 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 PTGER3P43115 390 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 MAPK8P45983 427 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 DGKEP52429 567 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 PRPF4BQ13523 1007 aaKnown RBP8.72□□□□□ -1.01
CSMD1-209ENST00000520630 KARSQ15046 597 aaKnown RBP8.72□□□□□ -1.01
CSMD1-209ENST00000520630 TRIM61Q5EBN2 209 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 PEAR1Q5VY43 1037 aaPredicted RBP8.72□□□□□ -1.01
CSMD1-209ENST00000520630 CENPPQ6IPU0 288 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 FAM173BQ6P4H8 233 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 CCNI2Q6ZMN8 369 aaPredicted RBP8.72□□□□□ -1.01
CSMD1-209ENST00000520630 ELMOD1Q8N336 334 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 GLIS3Q8NEA6 775 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 OR2I1PQ8NGU4 316 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 OXER1Q8TDS5 423 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 PIGKQ92643 395 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 CAMK1GQ96NX5 476 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 KIFC3Q9BVG8 833 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 PTPRHQ9HD43 1115 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 ANKFY1Q9P2R3 1169 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 SLC27A5Q9Y2P5 690 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 RAXQ9Y2V3 346 aa8.72□□□□□ -1.01
CSMD1-209ENST00000520630 CKAP5Q14008 2032 aa8.71□□□□□ -1.01
CSMD1-209ENST00000520630 NBPF19A0A087WUL8 3843 aa8.71□□□□□ -1.01
CSMD1-209ENST00000520630 BSNQ9UPA5 3926 aa8.71□□□□□ -1.01
CSMD1-209ENST00000520630 PIEZO2Q9H5I5 2752 aa8.71□□□□□ -1.01
CSMD1-209ENST00000520630 PLXNA2O75051 1894 aa8.71□□□□□ -1.01
CSMD1-209ENST00000520630 BTBD18B2RXH4 712 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 H7C4K7 107 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 M0QZQ0 153 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 OAZ2O95190 189 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 APBB3O95704 486 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 GABRR2P28476 465 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 GJA4P35212 333 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 CDR1P51861 262 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 PLCB2Q00722 1185 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 GRSF1Q12849 480 aaKnown RBP eCLIP8.71□□□□□ -1.02
CSMD1-209ENST00000520630 TRIM29Q14134 588 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 FOXD4L6Q3SYB3 417 aaPredicted RBP8.71□□□□□ -1.02
CSMD1-209ENST00000520630 MCTP1Q6DN14 999 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 SLC23A3Q6PIS1 610 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 TMEM92Q6UXU6 159 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 FOXD4L3Q6VB84 417 aaPredicted RBP8.71□□□□□ -1.02
CSMD1-209ENST00000520630 TAS1R3Q7RTX0 852 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 CYP2U1Q7Z449 544 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 SFTPA1Q8IWL2 248 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 DIS3L2Q8IYB7 885 aaKnown RBP8.71□□□□□ -1.02
CSMD1-209ENST00000520630 FAM177A1Q8N128 213 aaPredicted RBP8.71□□□□□ -1.02
CSMD1-209ENST00000520630 PNPLA1Q8N8W4 532 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 ATAD1Q8NBU5 361 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 MDGA1Q8NFP4 955 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 FAM200AQ8TCP9 573 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 RLN3Q8WXF3 142 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 USP13Q92995 863 aaPredicted RBP8.71□□□□□ -1.02
CSMD1-209ENST00000520630 TNFRSF25Q93038 417 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 PSMG2Q969U7 264 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 GBP4Q96PP9 640 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 LPIN3Q9BQK8 851 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 ATXN3LQ9H3M9 355 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 TASP1Q9H6P5 420 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 SCUBE2Q9NQ36 999 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 MAFFQ9ULX9 164 aa8.71□□□□□ -1.02
CSMD1-209ENST00000520630 TIMM13Q9Y5L4 95 aaPredicted RBP8.71□□□□□ -1.02
CSMD1-209ENST00000520630 ATXN2Q99700 1313 aaKnown RBP8.71□□□□□ -1.02
CSMD1-209ENST00000520630 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.7□□□□□ -1.02
CSMD1-209ENST00000520630 MTMR11A4FU01 709 aa8.7□□□□□ -1.02
CSMD1-209ENST00000520630 K7EQS6 105 aa8.7□□□□□ -1.02
CSMD1-209ENST00000520630 GJB3O75712 270 aa8.7□□□□□ -1.02
CSMD1-209ENST00000520630 PLA2G2AP14555 144 aa8.7□□□□□ -1.02
CSMD1-209ENST00000520630 CPB1P15086 417 aa8.7□□□□□ -1.02
CSMD1-209ENST00000520630 KCNE1P15382 129 aa8.7□□□□□ -1.02
CSMD1-209ENST00000520630 XBP1P17861 261 aa8.7□□□□□ -1.02
CSMD1-209ENST00000520630 ATF6P18850 670 aa8.7□□□□□ -1.02
CSMD1-209ENST00000520630 DRD1P21728 446 aa8.7□□□□□ -1.02
CSMD1-209ENST00000520630 GRM5P41594 1212 aa8.7□□□□□ -1.02
CSMD1-209ENST00000520630 DHPSP49366 369 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms